BLASTX nr result
ID: Lithospermum23_contig00004768
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00004768
(4272 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAZ08457.1 RNA polymerase II second largest subunit [Rhododendro... 2193 0.0
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2192 0.0
XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2192 0.0
XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2192 0.0
OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] 2190 0.0
XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2190 0.0
XP_011027835.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2189 0.0
XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2189 0.0
XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2187 0.0
XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2187 0.0
XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2187 0.0
XP_017422240.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2187 0.0
XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2186 0.0
XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus not... 2186 0.0
GAV75726.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2... 2186 0.0
KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hy... 2186 0.0
XP_014501986.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2186 0.0
KGN49226.1 hypothetical protein Csa_6G517340 [Cucumis sativus] 2185 0.0
XP_008439859.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2185 0.0
XP_006487405.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2185 0.0
>AAZ08457.1 RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2193 bits (5683), Expect = 0.0
Identities = 1081/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIK+K IQALQQRETPE+GGWHDLV+ GFIEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLVSARLNP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDV+IGKTTPI Q+EAQG A+RYTRRDHSTS+RHSE GMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELMSMAIAPRM T
Sbjct: 1160 KLLFQELMSMAIAPRMLT 1177
>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis] EEF43271.1 DNA-directed RNA polymerase II
subunit, putative [Ricinus communis]
Length = 1194
Score = 2192 bits (5681), Expect = 0.0
Identities = 1083/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+ EEGGWHDLV+ GFIEYID
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI QEEAQGQ++RYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 2192 bits (5679), Expect = 0.0
Identities = 1081/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPS+MFVRMLSR+SAKGGSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVRSYVQKCVDNGKDVNLQFAI
Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+ EEGGWHDLV+ GFIEYID
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI QEEAQGQ++RYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 981
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1162 KLLFQELMAMAIAPRMLT 1179
>XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] XP_012449723.1 PREDICTED: DNA-directed RNA
polymerase II subunit RPB2 [Gossypium raimondii]
XP_017641873.1 PREDICTED: DNA-directed RNA polymerase II
subunit RPB2 [Gossypium arboreum] XP_017641874.1
PREDICTED: DNA-directed RNA polymerase II subunit RPB2
[Gossypium arboreum] KHG27061.1 DNA-directed RNA
polymerase II subunit RPB2 [Gossypium arboreum]
KJB68623.1 hypothetical protein B456_010G255400
[Gossypium raimondii] KJB68624.1 hypothetical protein
B456_010G255400 [Gossypium raimondii]
Length = 1189
Score = 2192 bits (5679), Expect = 0.0
Identities = 1081/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEFCETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVG+HR+PDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRETPE+GGWHDLV+ GFIEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQASRY++RDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSKRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]
Length = 1192
Score = 2190 bits (5675), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 81 FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHR+PDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+ EEGGWHDLV+ GFIEYID
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QE+AQGQ++RYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1160
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1161 KLLFQELMAMAIAPRMLT 1178
>XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
cacao] EOY28253.1 DNA-directed RNA polymerase family
protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2190 bits (5675), Expect = 0.0
Identities = 1080/1158 (93%), Positives = 1107/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVG+FCETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVG+HR+PDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+PE+GGWHDLV+ GFIEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQASRY+RRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQV+IPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>XP_011027835.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Populus
euphratica]
Length = 1198
Score = 2189 bits (5672), Expect = 0.0
Identities = 1082/1158 (93%), Positives = 1103/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 27 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 87 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 147 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 206
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY EVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 207 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 266
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 267 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 326
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEFCETKKAYYFGYIIH
Sbjct: 327 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 386
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 387 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 446
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 447 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 506
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 507 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 566
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNG WVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 567 SPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 626
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQ+LLI+KK I ALQQRETP+EGGWHDLVS GFIEYID
Sbjct: 627 YGRCSRPLFIVEKQKLLIRKKDIHALQQRETPDEGGWHDLVSKGFIEYIDTEEEETTMIS 686
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 687 MTIHDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 746
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 747 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 806
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 807 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 866
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI QEEAQGQ++RYTRRDHS S+RHSE GMVDQVLLTTNAD
Sbjct: 867 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGMVDQVLLTTNAD 926
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 927 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 986
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 987 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1046
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1047 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1106
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1107 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1166
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1167 KLLFQELMAMAIAPRMLT 1184
>XP_009765275.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 2189 bits (5671), Expect = 0.0
Identities = 1079/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG+GE+CETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNG WVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK IQ LQQRE+PEEGGWHDLV+ G+IEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+Q++AQGQASRYTR+DHSTS+RHSE GMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>XP_019266160.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nicotiana
attenuata] OIT05504.1 dna-directed rna polymerase ii
subunit rpb2 [Nicotiana attenuata]
Length = 1191
Score = 2187 bits (5668), Expect = 0.0
Identities = 1078/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG+GE+CETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNG WVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK IQ LQQRE+PEEGGWHDLV+ G+IEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+Q++AQGQASRYTR+DHSTS+RHSE GMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>XP_009605280.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 2187 bits (5668), Expect = 0.0
Identities = 1078/1158 (93%), Positives = 1106/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 80 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVL 199
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 319
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVG+GE+CETKKAYYFGYIIH
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 379
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 439
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNG WVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 560 SPAVIPQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK IQ LQQRE+PEEGGWHDLV+ G+IEYID
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMIS 679
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 799
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDG 859
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+Q++AQGQASRYTR+DHSTS+RHSE GMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>XP_015889960.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ziziphus
jujuba]
Length = 1191
Score = 2187 bits (5667), Expect = 0.0
Identities = 1082/1159 (93%), Positives = 1103/1159 (95%), Gaps = 1/1159 (0%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 78
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 79 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 138
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+S+KGGSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 258
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFTDTQMMELLRPSLEEAFVIQNQQ 318
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVGVGEFCETKKAYYFGYIIH
Sbjct: 319 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 379 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 438
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 499 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 558
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 559 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 618
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+PE+GGWHDLVS GFIEYID
Sbjct: 619 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMIS 678
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 679 MTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 738
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 739 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 798
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 799 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 858
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQ-ASRYTRRDHSTSMRHSENGMVDQVLLTTNA 2872
LAPPGTRV+GEDVIIGKTTPI Q+EAQGQ ASRYTRRDHS S+RHSE G+VDQVLLTTNA
Sbjct: 859 LAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRHSETGIVDQVLLTTNA 918
Query: 2873 DGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIP 3052
DGLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIP
Sbjct: 919 DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 978
Query: 3053 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTG 3232
SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALH+CGYQMRGFETMYNGHTG
Sbjct: 979 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHRCGYQMRGFETMYNGHTG 1038
Query: 3233 RKLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3412
R+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1039 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1098
Query: 3413 IAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYA 3592
IAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYA
Sbjct: 1099 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1158
Query: 3593 CKLLFQELMSMAIAPRMFT 3649
CKLLFQELM+MAIAPRM T
Sbjct: 1159 CKLLFQELMAMAIAPRMLT 1177
>XP_017422240.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Vigna
angularis] KOM39913.1 hypothetical protein
LR48_Vigan04g011100 [Vigna angularis] BAT80074.1
hypothetical protein VIGAN_02303700 [Vigna angularis var.
angularis]
Length = 1197
Score = 2187 bits (5666), Expect = 0.0
Identities = 1077/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 25 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 84
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 85 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 144
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYF+INGSEKVL
Sbjct: 145 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFVINGSEKVL 204
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+S+KGGSSGQY
Sbjct: 205 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 264
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 265 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 324
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVG+GE+CETKKAYYFGYIIH
Sbjct: 325 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 384
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 385 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 444
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 445 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 504
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 505 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 564
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCW+GIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 565 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 624
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIV+KQRLLIKKK I ALQQRE+PEEGGWHDLVS GFIEYID
Sbjct: 625 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 684
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 685 MTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 744
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 745 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 804
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 805 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 864
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQA RYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 865 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNAD 924
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 925 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 984
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 985 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1044
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1045 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1104
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQV IPYAC
Sbjct: 1105 AHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVFIPYAC 1164
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1165 KLLFQELMAMAIAPRMLT 1182
>XP_019162258.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ipomoea nil]
Length = 1190
Score = 2186 bits (5665), Expect = 0.0
Identities = 1078/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 78
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 79 FAETIYKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 138
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 258
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDT MMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTPMMELLRPSLEEAFVIQNQQ 318
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA++ILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 319 VALDYIGKRGATVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 378
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 379 AIGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 438
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 499 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 558
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNG WVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 559 SPAVIPQATKIFVNGGWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 618
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLI+K+ IQALQQRE+PEEGGWHDLV+ GFIEYID
Sbjct: 619 YGRCSRPLFIVEKQRLLIRKRDIQALQQRESPEEGGWHDLVAKGFIEYIDTEEEETTMIS 678
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DL+ ARLNP EAYS TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 679 MTINDLIQARLNPGEAYSVTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 738
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 739 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 798
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 799 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 858
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+Q++AQGQ +RYT+RDHSTS+RHSE GMVDQVLLTTNAD
Sbjct: 859 LAPPGTRVSGEDVIIGKTTPISQDDAQGQNARYTKRDHSTSLRHSETGMVDQVLLTTNAD 918
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 919 GLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 978
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 979 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1038
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1039 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1098
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1099 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 1158
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1159 KLLFQELMAMAIAPRMLT 1176
>XP_010108197.1 DNA-directed RNA polymerase II subunit [Morus notabilis] EXC18122.1
DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 2186 bits (5665), Expect = 0.0
Identities = 1080/1159 (93%), Positives = 1104/1159 (95%), Gaps = 1/1159 (0%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
F ETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 81 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+S+KGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 260
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVG GEFCETKKAYYFGYIIH
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLC 380
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 440
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKK+ I+ALQQRETPEE GWHDLVSNGFIEYID
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMIS 680
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARLNP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTINDLVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 860
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQ-ASRYTRRDHSTSMRHSENGMVDQVLLTTNA 2872
LAPPGTRV+GEDVIIGKTTPI Q+EAQGQ ASRYTRRDHS S+RHSENG+VDQVLLTTNA
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRHSENGIVDQVLLTTNA 920
Query: 2873 DGLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIP 3052
DGLRFVKVR+RS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIP
Sbjct: 921 DGLRFVKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 980
Query: 3053 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTG 3232
SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTG
Sbjct: 981 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1040
Query: 3233 RKLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 3412
R+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM
Sbjct: 1041 RRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1100
Query: 3413 IAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYA 3592
IAHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYA
Sbjct: 1101 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYA 1160
Query: 3593 CKLLFQELMSMAIAPRMFT 3649
CKLLFQELM+MAIAPRM T
Sbjct: 1161 CKLLFQELMAMAIAPRMLT 1179
>GAV75726.1 RNA_pol_Rpb2_6 domain-containing protein/RNA_pol_Rpb2_7
domain-containing protein/RNA_pol_Rpb2_2
domain-containing protein/RNA_pol_Rpb2_1
domain-containing protein/RNA_pol_Rpb2_3
domain-containing protein/RNA_pol_Rpb2_4
domain-containing protein/RNA_pol_Rpb2_5
domain-containing protein [Cephalotus follicularis]
Length = 1192
Score = 2186 bits (5664), Expect = 0.0
Identities = 1077/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQ+DAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 21 ITQDDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 81 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDF KVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA++ILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 321 VALDYIGKRGATVGVTREKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLVLC 380
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 381 ALGQRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRETPE+GGWHDLV+ G+IEYID
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLVAKGYIEYIDTEEEETTMIS 680
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+ ++AQGQASRYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISPDDAQGQASRYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECR CKNKT+IVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRSCKNKTEIVQVHIPYAC 1160
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELMSMAIAPRM T
Sbjct: 1161 KLLFQELMSMAIAPRMMT 1178
>KZV51965.1 DNA-directed RNA polymerase II subunit [Dorcoceras hygrometricum]
Length = 1194
Score = 2186 bits (5664), Expect = 0.0
Identities = 1074/1158 (92%), Positives = 1108/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 82
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA+ QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICY+F+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYNFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKAYYFGYIIH
Sbjct: 323 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQ+TKIFVNGCWVGIHR+PDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQSTKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLI+KK IQALQQRE+P+EGGWHDLV+ GFIEYID
Sbjct: 623 YGRCSRPLFIVEKQRLLIRKKDIQALQQRESPDEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLVSAR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTISDLVSARINPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+ ++AQGQA+RYT+RDHSTS+RHSE G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISADDAQGQAARYTKRDHSTSLRHSETGIVDQVLLTTNAD 922
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>XP_014501986.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Vigna
radiata var. radiata]
Length = 1195
Score = 2186 bits (5664), Expect = 0.0
Identities = 1077/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 142
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+S+KGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQY 262
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVTKEKRIKYA+EILQKEMLPHVG+GE+CETKKAYYFGYIIH
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLC 382
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCW+GIHRDPDM DVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIV+KQRLLIKKK I ALQQRE+PEEGGWHDLVS G+IEYID
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGYIEYIDTEEEETTMIS 682
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV AR+NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQED 802
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQA RYTRRDHS S+RHSE G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCE CGLIAIANLKK+SFECRGCKNKTDIVQV IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVFIPYAC 1162
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>KGN49226.1 hypothetical protein Csa_6G517340 [Cucumis sativus]
Length = 1248
Score = 2185 bits (5663), Expect = 0.0
Identities = 1078/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 77 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 136
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
AETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 137 VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 196
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 197 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 256
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 257 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 316
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 317 IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 376
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRGSTVGVTKEKRIKYA+EILQKEMLPHVGVGEFCETKKAYYFGYIIH
Sbjct: 377 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 436
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 437 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 496
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 497 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 556
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 557 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 616
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDP+M DVNTEVGVVRDIRLKELRIYTD
Sbjct: 617 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 676
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+PE+GGWHDLV+ GFIEYID
Sbjct: 677 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 736
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DL+ AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 737 MTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 796
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 797 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 856
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 857 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 916
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQA+RY+RRDHS S+RHSENG+VDQVLLTTNAD
Sbjct: 917 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYSRRDHSISLRHSENGIVDQVLLTTNAD 976
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 977 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 1036
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 1037 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1096
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1097 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1156
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKKSSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1157 AHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIVQVYIPYAC 1216
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRMFT
Sbjct: 1217 KLLFQELMAMAIAPRMFT 1234
>XP_008439859.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Cucumis melo]
Length = 1199
Score = 2185 bits (5663), Expect = 0.0
Identities = 1078/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ D
Sbjct: 28 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 87
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
AETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKG+D
Sbjct: 88 VAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHD 147
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 148 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 207
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYA+ AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 208 IAQEKMSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 267
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIR EIPIIIVFRALGFVADKDILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 268 IRATLPYIRNEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 327
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRGSTVGVTKEKRIKYA+EILQKEMLPHVGVGEFCETKKAYYFGYIIH
Sbjct: 328 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 387
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAI
Sbjct: 388 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 447
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 448 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 507
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 508 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 567
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDP+M DVNTEVGVVRDIRLKELRIYTD
Sbjct: 568 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 627
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKKK I ALQQRE+PE+GGWHDLV+ GFIEYID
Sbjct: 628 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 687
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DL+ AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 688 MTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 747
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 748 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 807
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 808 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 867
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+QEEAQGQA+RY+RRDHS S+RHSENG+VDQVLLTTNAD
Sbjct: 868 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYSRRDHSISLRHSENGIVDQVLLTTNAD 927
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 928 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 987
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 988 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1047
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1048 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1107
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKKSSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1108 AHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKKSSFECRGCKNKTDIVQVYIPYAC 1167
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRMFT
Sbjct: 1168 KLLFQELMAMAIAPRMFT 1185
>XP_006487405.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Citrus
sinensis]
Length = 1195
Score = 2185 bits (5663), Expect = 0.0
Identities = 1077/1158 (93%), Positives = 1105/1158 (95%)
Frame = +2
Query: 176 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 355
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSD 82
Query: 356 FAETIYKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGYD 535
FAETIYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKG+D
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 536 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 715
GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 716 IAQEKMSTNHVYVFKKRQPNKYAYAAEVRSMADNQNRPPSTMFVRMLSRSSAKGGSSGQY 895
IAQEKMSTNHVYVFKKRQPNKYAY AEVRSMA++QNRPPSTMFVRMLSR+SAKGGSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 896 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQ 1075
IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQ 322
Query: 1076 VALDYIGKRGSTVGVTKEKRIKYAREILQKEMLPHVGVGEFCETKKAYYFGYIIHXXXXX 1255
VALDYIGKRG+TVGVT++KRIKYA+EILQKEMLPHVG G+FCETKKAYYFGYIIH
Sbjct: 323 VALDYIGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLC 382
Query: 1256 XXXXXXXDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 1435
DDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 442
Query: 1436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 1615
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1616 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 1795
KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1796 SPAVIPQATKIFVNGCWVGIHRDPDMXXXXXXXXXXXXDVNTEVGVVRDIRLKELRIYTD 1975
SPAVIPQATKIFVNGCWVGIHRDP+M DVNTEVGVVRDIRLKELRIYTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1976 YGRCSRPLFIVEKQRLLIKKKHIQALQQRETPEEGGWHDLVSNGFIEYIDXXXXXXXXXX 2155
YGRCSRPLFIVEKQRLLIKK+ I ALQQRE+PE+GGWHDLV+ GFIEYID
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2156 XXXXDLVSARLNPDEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2335
DLV ARL+P+EAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2336 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2515
MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2516 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 2695
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 862
Query: 2696 LAPPGTRVAGEDVIIGKTTPINQEEAQGQASRYTRRDHSTSMRHSENGMVDQVLLTTNAD 2875
LAPPGTRV+GEDVIIGKTTPI+Q+EAQGQASRYTRRDHS S+RHSE GMVDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNAD 922
Query: 2876 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGTTPDIIVNPHAIPS 3055
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEG TPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 3056 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 3235
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3236 KLEAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3415
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3416 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYAC 3595
AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKK+SFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 3596 KLLFQELMSMAIAPRMFT 3649
KLLFQELM+MAIAPRM T
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180