BLASTX nr result
ID: Lithospermum23_contig00003375
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00003375
(4434 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN81016.1 hypothetical protein VITISV_025518 [Vitis vinifera] 414 e-167
KZV23217.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [D... 399 e-161
KYP42321.1 Copia protein [Cajanus cajan] 355 e-151
BAB10503.1 retroelement pol polyprotein-like [Arabidopsis thaliana] 366 e-151
GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterran... 357 e-151
XP_015084421.1 PREDICTED: LOW QUALITY PROTEIN: retrovirus-relate... 335 e-150
KYP34293.1 Retrovirus-related Pol polyprotein from transposon TN... 345 e-150
ABH07899.1 putative polyprotein [Solanum lycopersicum] 347 e-150
KZV53534.1 hypothetical protein F511_42283 [Dorcoceras hygrometr... 334 e-144
KHN05285.1 Retrovirus-related Pol polyprotein from transposon TN... 343 e-143
GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterran... 310 e-142
XP_019258757.1 PREDICTED: uncharacterized protein LOC109236973 [... 461 e-136
KYP58728.1 Retrovirus-related Pol polyprotein from transposon TN... 309 e-131
OMO87137.1 Integrase, catalytic core [Corchorus capsularis] 312 e-130
CAC95126.1 gag-pol polyprotein [Populus deltoides] 310 e-130
GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterran... 309 e-129
OMO65653.1 hypothetical protein CCACVL1_21443 [Corchorus capsula... 282 e-128
XP_015165967.1 PREDICTED: uncharacterized protein LOC107061351, ... 436 e-128
CAN74229.1 hypothetical protein VITISV_000584 [Vitis vinifera] 410 e-128
KHN06274.1 Retrovirus-related Pol polyprotein from transposon TN... 302 e-128
>CAN81016.1 hypothetical protein VITISV_025518 [Vitis vinifera]
Length = 1461
Score = 414 bits (1064), Expect(3) = e-167
Identities = 222/522 (42%), Positives = 302/522 (57%), Gaps = 26/522 (4%)
Frame = +1
Query: 1504 YICQICPKARQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLT 1683
++C ICP A+Q R SF SS ++APFDLIH D WG + +++G YFLTIVDD TR T
Sbjct: 567 HVCDICPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYT 626
Query: 1684 WTHLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSS 1863
W HL+ KS IL++FI++V TQFN IK +R+DN E S ++ +KGI+ S
Sbjct: 627 WIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMK--QYLDTKGINYHHS 684
Query: 1864 CTHTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSP 2043
C +TPQQNGVVERKH+HLL RAL FQ+N P +FWGE + TA YL+N P P L+H SP
Sbjct: 685 CAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSP 744
Query: 2044 FQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQ 2223
+Q+L PSY HLR FGCLCYA P KFD+ +R C+F+GYP G+K Y++YDL T
Sbjct: 745 YQLLXNKLPSYHHLRTFGCLCYATNLLPTH-KFDQRARRCIFVGYPLGQKGYRVYDLXTN 803
Query: 2224 TVFTSRDVIFHENWYPIHS---------AQLPIP----------STLPEIPNDIPYHIYY 2346
F+S DV+FHE+ +P H+ LP+P +T P+ + P
Sbjct: 804 KFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPP----- 858
Query: 2347 PMVAHSEALDHSN-------ISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNHTTSCDSL 2505
P+++ E+ + +SP P TT + I Q + + HT S
Sbjct: 859 PLLSSLESTSNERTLXLDTIVSPP-----PPTTRRSDRIKQPNVHLRNFHLYHTAKVASS 913
Query: 2506 LHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLHFFE 2685
S + H LT + + + +P Y +++VC I T E
Sbjct: 914 QSSSLSGTRHPLTRYI---SYAQLSPKY-RNFVCAITT-------------------LVE 950
Query: 2686 SKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKR 2865
+Y+QA +PKW +++ E++ L N TW L PLP G + I CKW+YKIK SDG+V+R
Sbjct: 951 PTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPYGHRPIGCKWVYKIKYNSDGTVER 1010
Query: 2866 FKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVANH 2991
+KARLV KGF Q+ GIDY ETFSPV K++T+RC+LAI H
Sbjct: 1011 YKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRH 1052
Score = 145 bits (365), Expect(3) = e-167
Identities = 97/295 (32%), Positives = 144/295 (48%), Gaps = 8/295 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L YFLG EV + +S++Q K+ ++L ++GL +K
Sbjct: 1171 IKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGLL----GAKPLSTPMEENNKLL 1226
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
G LL N YR +VG+L +LT TR ++ +SV +LSQFMQ PR+ HL A+ L
Sbjct: 1227 PTVGDLLKNPSTYRRLVGQLIYLTITRPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLK 1286
Query: 3725 QHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVC------GHTWRLSH*--LEK* 3880
+ + ++ + C +W+ + +
Sbjct: 1287 GAPGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLXGAXISWKTKKQTTVSRS 1346
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E+ +RAMA T ++TW+ LLD L V + P L CD +A+HIA N ++H+ TKHIE
Sbjct: 1347 SXESEYRAMASITCELTWLRYLLDDLKVEHSQPAKLFCDSKAALHIAANPVYHERTKHIE 1406
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHPP 4225
IDCH +++ G + A +P++ Q D+ TK L LLSK GVL H P
Sbjct: 1407 IDCHVVRERIQSGAIVTAHVPSSCQLADLFTKPLNSSIFHSLLSKFGVL-DIHAP 1460
Score = 84.7 bits (208), Expect(3) = e-167
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQ---VCRLRKSLYGLKQVFRQWFAKLST 3167
L+++D+ NAFLHGDL EEVYMQ P G +G+ VCRL KSLYGLKQ R WF K S
Sbjct: 1055 LHQMDVQNAFLHGDLLEEVYMQLPLGFR-QQGETPMVCRLNKSLYGLKQASRSWFRKFSA 1113
Query: 3168 ALLSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
+ G+ QS+ DYSL+ + TG++++ I LK L
Sbjct: 1114 TIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMIITGNDENVIAALKESL 1165
Score = 73.2 bits (178), Expect = 4e-09
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 6/178 (3%)
Frame = +3
Query: 270 NPLQLHHSDQPKYVLSTSLLNQNNFHHWRRSP*WRRIN*ALLLGNLFDLM---ILLKLCC 440
+P LHHSD P VL + ++ +N+ W R+ + +L + + I
Sbjct: 76 DPFSLHHSDHPGMVLVSKVIEGDNYSTWSRA-----MRISLSAKDKIGFVTGSIKPPSST 130
Query: 441 SIGAPEWS*LGFYIAESIIYCRTAAEIWSYSQTNHVRIYHIQRDLALNSQGNTSIFVYFS 620
P W +S C + Q N RIY I+RD+ + QG SI VY++
Sbjct: 131 DDSFPSWQRCNDMHQKSGQICENV-----FRQGNDSRIYQIKRDIVEHRQGQQSISVYYT 185
Query: 621 QL*RLWDE---YLNMIECIDNSDVQLTSILQNQ*IMQLLMGLNDCYTTV*GTILMMKP 785
+L WDE Y ++ C +L + + +MQ LMGLND Y + G IL+M P
Sbjct: 186 KLKAFWDELSSYHEVLSCSCGGLEKLKERDEKERVMQFLMGLNDSYAAIRGQILLMHP 243
>KZV23217.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Dorcoceras
hygrometricum]
Length = 1406
Score = 399 bits (1024), Expect(3) = e-161
Identities = 211/531 (39%), Positives = 298/531 (56%), Gaps = 10/531 (1%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYICQICPKARQYRQSFSSSTTKTNA-PFDLIHI 1599
H H + RL H LP + KSL C ICP ++Q R F A PF L+H+
Sbjct: 460 HQRFGHASVSRLQH---LPFITDKSLTSHCPICPLSKQTRTPFPIKDHSHAAHPFSLLHM 516
Query: 1600 DTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIKV 1779
D WG Y T+ G YFLT+VDD +R TW LL KS+ F +++ F +V+ F T I+
Sbjct: 517 DIWGPYKIATHTGAKYFLTVVDDFSRCTWVFLLQFKSDTFSVIKDFFTFVSNHFKTRIQT 576
Query: 1780 IRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNAP 1959
IR+DNA +F + S GI QSSC +TPQQNG+VERKH+H+L +RA+ FQ++ P
Sbjct: 577 IRTDNALDFFNNNCKSLFNSLGIIHQSSCPYTPQQNGLVERKHRHILNVARAIKFQASLP 636
Query: 1960 TQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPARTK 2139
Q+WGEC+L A Y++N P P L++ +P++ LF PSY H R FGCLCYA+ P+ K
Sbjct: 637 DQYWGECVLHAAYIINRTPTPLLSYKTPYEALFSKPPSYDHFRVFGCLCYASNINPSH-K 695
Query: 2140 FDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIPSTLPEIP 2319
FD +R CVF+GYP +K YK+ D T +FT+RDV+FHEN +P + + + P
Sbjct: 696 FDARARACVFLGYPLHQKGYKLLDTKTNQIFTARDVVFHENIFPFLNQHISSTAPHQSWP 755
Query: 2320 NDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNHTTSCD 2499
+ H + V ++ I S D P +++ S S + S D
Sbjct: 756 TSLVNHEHELFVPNTLVHTQHTIDLQPSADPPSADQPQSSVDLPSADQPQPSAD-PPSAD 814
Query: 2500 SLLHSFVPNAP-HTLTHVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLH 2676
H P + + ++++R +T P ++ DYVC +
Sbjct: 815 ---HPPADQPPVPSCSPATKQTSRHRTPPRWMNDYVCSHSSTPYGLEKYLSHKYISPAYS 871
Query: 2677 FF--------ESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYK 2832
F E KSYK+A+ +P W D++ EI L N+TW +V +PPGKKAI C+W+YK
Sbjct: 872 SFLTAISQSTEPKSYKEAATDPNWRDAMAAEIAALEANNTWTIVQIPPGKKAIGCRWVYK 931
Query: 2833 IKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVA 2985
IK +SDG++ R+KARLV KG+ Q+YGIDY +TFSPV K+ T+RCI+ I A
Sbjct: 932 IKYRSDGTIDRYKARLVAKGYTQQYGIDYQDTFSPVAKIVTVRCIITIAAA 982
Score = 136 bits (343), Expect(3) = e-161
Identities = 94/303 (31%), Positives = 149/303 (49%), Gaps = 22/303 (7%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLT------FPIRK-----SKAY 3511
IKDLG L YFLG EV + + + Q K++ ELLSD+G+T P+ + + Y
Sbjct: 1102 IKDLGPLKYFLGIEVARSKNGICLHQRKYILELLSDAGMTGCKPFDTPMEQHIRLTTNDY 1161
Query: 3512 VXXXXXXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHL 3691
LL + Y+ ++G+L +LT TR D+ +++Q LSQFM P++ H+
Sbjct: 1162 DAHNTAVTEKSLTLDPLLTDPSSYQRLIGRLIYLTITRPDISYTIQHLSQFMHSPKQSHM 1221
Query: 3692 QALKASLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGH-------- 3847
A L + L + + ++ V G+
Sbjct: 1222 AAAIRVLGYIKKSPGLGIFLPASNDLQLKAYCDSDWASCPMTRK---SVTGYLIQLGPAS 1278
Query: 3848 -TWRLS--H*LEK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHI 4018
+W+ + + + E +RAMA A+ +V W+ LL +G+ P L CD +A+HI
Sbjct: 1279 ISWKTKQQNTVSRSSAEAEYRAMASASCEVIWLRGLLLDMGLHINNPTHLFCDNQAALHI 1338
Query: 4019 ARNLIFHKCTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKL 4198
A N ++H+ TKHIE+DCHF +K+ ++T I T Q D+LTK L +H +L+SKL
Sbjct: 1339 AMNPMYHERTKHIELDCHFIREKIQRKIITTFHISTRDQPADILTKALGSDKHQFLMSKL 1398
Query: 4199 GVL 4207
G+L
Sbjct: 1399 GLL 1401
Score = 88.6 bits (218), Expect(3) = e-161
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +3
Query: 2994 PLYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQV-CRLRKSLYGLKQVFRQWFAKLSTA 3170
PL+++D+ NAFL GDL E++YM P G + C+L KSLYGLKQ RQW K
Sbjct: 986 PLHQMDVTNAFLQGDLDEDIYMTIPPGFGKQSPNLACKLLKSLYGLKQASRQWNTKFCQV 1045
Query: 3171 LLSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
L GY QS++D+S++ Q+ TG++ D I+QLK HL
Sbjct: 1046 LAQAGYKQSQHDHSMFSKQDGPRITILIVYVDDIVITGNDNDSISQLKLHL 1096
Score = 71.2 bits (173), Expect(2) = 4e-14
Identities = 39/108 (36%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Frame = +3
Query: 480 IAESIIYCRTAAEIWS-----YSQTNHVRIYHIQRDLALNSQGNTSIFVYFSQL*RLWDE 644
I I+YC A+++W+ +++ + RIY IQR++ QG + + VYFS+L +LWDE
Sbjct: 50 IFAGIVYCTDASKVWADLKERFNKVSGSRIYSIQREIVCLKQGTSPVSVYFSKLKQLWDE 109
Query: 645 YLNMI---ECIDNSDVQLTSILQNQ*IMQLLMGLNDCYTTV*GTILMM 779
Y +++ C + + Q Q ++Q LMGLND Y ++ ILMM
Sbjct: 110 YSSLVTLPSCACATARAYITHEQTQCLIQFLMGLNDSYGSIRSQILMM 157
Score = 38.5 bits (88), Expect(2) = 4e-14
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 359 IALMAKNKLGFVTGEFVRPNDSTQAL-L*HRCTGMVIAWFL 478
+AL AKNK+GF+ G V+P+D + L RC +V++W +
Sbjct: 3 LALTAKNKIGFIDGSCVKPSDRSSNLHQWERCNAIVLSWIM 43
>KYP42321.1 Copia protein [Cajanus cajan]
Length = 1456
Score = 355 bits (910), Expect(3) = e-151
Identities = 205/564 (36%), Positives = 304/564 (53%), Gaps = 34/564 (6%)
Frame = +1
Query: 1402 VHDTFFCHNILDHLPLDRLSHI--HNLPVPSMKSLGYICQICPKARQYRQSFSSSTTKTN 1575
++D+ H+ L H+P + I N +P K +C +C ++Q SFS+S T ++
Sbjct: 503 LNDSMLWHSKLGHVPNKVMQQICSQNSAIPFHKF--EVCDVCHYSKQKNLSFSNSHTTSS 560
Query: 1576 APFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTT 1755
F+LIH+D WG + ++ GY YFLT+VDD +R TWTHLL KS IL +FI +
Sbjct: 561 RFFELIHVDIWGPLNVSSFQGYKYFLTVVDDYSRFTWTHLLKTKSEVKAILPSFITLIEK 620
Query: 1756 QFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRA 1935
QF+ +K +RSDN EF +F+ +KGI ++SC PQQNG+VERKH+H+L RA
Sbjct: 621 QFDVHLKRLRSDNGKEFY---LHDFFQNKGILHETSCVERPQQNGIVERKHQHILNVCRA 677
Query: 1936 LLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAA 2115
LLFQ+ P QFW + AT+++N P P L+ SPF+M++ P + L+ FGCL +A
Sbjct: 678 LLFQAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIYNCKPDLTELKVFGCLAFAT 737
Query: 2116 IDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLP- 2292
RTK DR + C+F+GY G K + +++L ++ SRDV+F+E +P +SA +P
Sbjct: 738 TLSSKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLISRDVLFYEKIFP-YSAHVPS 796
Query: 2293 ---IPSTLPEIPNDIPYHIY---YPMVAHSEALDHSNISPGL-------SHDIPDTTHTN 2433
S L ++ D IY +P S + L S D P + N
Sbjct: 797 MSASDSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPLPSSETTISTDRPPFSPIN 856
Query: 2434 TNIMQTSTPST-HISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQ 2610
T + T+T ST + ++TT+ +A + R STR++ P YL++Y C+
Sbjct: 857 TCPIPTATLSTPELPSSNTTN----------DASQVVMPQTRVSTRIRKPPRYLQEYYCE 906
Query: 2611 -----------------IDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSIN 2739
T H E S+K+A+ W ++
Sbjct: 907 NLASSSAASNCLYPLSSFVTYNNCSPSHTSFCLSISAQH--EPTSFKEANSEECWRRAME 964
Query: 2740 NEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDY 2919
E+ L N TW LV LP GK+ + CKW+Y++K K DGSV+R+KARLV KGF Q G+DY
Sbjct: 965 AELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAKGFTQTEGVDY 1024
Query: 2920 LETFSPVVKMSTIRCILAIVVANH 2991
ETFSPVVK+ST+R +L++ A++
Sbjct: 1025 FETFSPVVKLSTVRFLLSLAAAHN 1048
Score = 137 bits (346), Expect(3) = e-151
Identities = 98/297 (32%), Positives = 154/297 (51%), Gaps = 11/297 (3%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L +FLG E+ + + L + Q K+ ELLS+ GLT K
Sbjct: 1166 IKDLGPLKFFLGLEIARSQSGLILNQRKYCLELLSEHGLT----DCKPVSTPIDASVKLY 1221
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQA-------LK 3703
++G L + +R ++G+L +LTNTR D+ F+VQ LSQF+ PR H QA LK
Sbjct: 1222 ASEGLPLDDPTIFRRLIGRLLYLTNTRPDISFAVQQLSQFVDSPRATHFQAALRILRYLK 1281
Query: 3704 ASLELCSQH-SNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*--LE 3874
+S L + S + H ++ + AS I++ +W+ +
Sbjct: 1282 SSPALGLFYPSQTEHRIQAFSDSDWASC--PNTRRSVTGFCIFYGSALISWKSKKQSTVS 1339
Query: 3875 K*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKH 4054
+ E +RA+A T ++ W++ L L + P ++ CD SA++IA+N FH+ TKH
Sbjct: 1340 RSSSEAEYRALASVTCELQWLLFLCHDLSINIPTPFSIFCDSQSAIYIAKNPTFHERTKH 1399
Query: 4055 IEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQH-SYLLSKLGVLPSTHP 4222
IE+DCH T K+ +GL+ L +P+ Q DV TK L YP++ + +SKL ++ +P
Sbjct: 1400 IEVDCHLTRLKIQQGLIHLFHVPSKSQLADVFTKAL-YPRNFTEAVSKLCLIDIYNP 1455
Score = 98.6 bits (244), Expect(3) = e-151
Identities = 51/113 (45%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQ-VCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L++LD++NAFLHGDL EEVYM+PP G + + VC+L KSLYGLKQ RQW KL+ AL
Sbjct: 1051 LHQLDVDNAFLHGDLFEEVYMKPPPGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEAL 1110
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDLQ 3332
+SL + QS D+SL+ ++ TG++ +I+ +KA+L Q
Sbjct: 1111 ISLNFIQSSTDHSLFIKKSHSSITALLVYVDDVVLTGNDMAEISAVKAYLHAQ 1163
>BAB10503.1 retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 366 bits (940), Expect(3) = e-151
Identities = 201/533 (37%), Positives = 288/533 (54%), Gaps = 8/533 (1%)
Frame = +1
Query: 1402 VHDTFFCHNILDHLPLDRLSHIHN---LPVPSMKSLGYICQICPKARQYRQSFSSSTTKT 1572
V D+ H+ L H ++ +H+ LP + + L + C IC KA+Q SF S +
Sbjct: 580 VVDSALWHSRLGHPSYEKNDVLHDVLGLPKRNKEDLVH-CSICQKAKQKHLSFPSKNNMS 638
Query: 1573 NAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVT 1752
FDLIHIDTWG + T T GY YFLTIVDD +R TW +L+ K++ I F+ V
Sbjct: 639 ENKFDLIHIDTWGPFATPTTEGYKYFLTIVDDYSRATWVYLMKAKNDVLQIFPDFLKMVE 698
Query: 1753 TQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSR 1932
TQ+ T +K +RSDNAPE + Y +KGI SC TPQQN VVERKH+H+L +R
Sbjct: 699 TQYGTLVKAVRSDNAPELRFEA---LYQAKGIISYHSCPETPQQNSVVERKHQHILNVAR 755
Query: 1933 ALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYA 2112
AL+F++N P +FWG+C+L+A +L+N P P L++ SPF++L P Y+ L+ FGCLCY
Sbjct: 756 ALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVPDYTSLKVFGCLCYE 815
Query: 2113 AIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLP 2292
+ R KF +R CVF+GYP G K YK+ DL T T+ SR V+F+E +P +
Sbjct: 816 STSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTIHISRHVVFYETVFPFTDKTI- 874
Query: 2293 IPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHTNT-NIMQTSTPSTH 2469
IP D+ D+ D H N N TS +
Sbjct: 875 -------IPRDV-------------------------FDLVDPVHENIENPPSTSESAPK 902
Query: 2470 ISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKD----YVCQIDTXXXXXX 2637
+S + L + NA +T VR L + Y+C ++
Sbjct: 903 VSSKRESRPPGYLQDYFCNAVPDVTKDVRYPLNAYINYTQLSEEFTAYICAVNK------ 956
Query: 2638 XXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISC 2817
+ E +Y QA K +W+D++ EI+ L + +TW + LP GKK I C
Sbjct: 957 -------------YPEPCTYAQAKKIKEWLDAMEIEIDALESTNTWSVCSLPQGKKPIGC 1003
Query: 2818 KWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAI 2976
KW++K+KL +DGS++RFKARLV KG+ Q+ G+DY +TFSPV KM+T++ +L++
Sbjct: 1004 KWVFKVKLNADGSLERFKARLVAKGYTQREGLDYYDTFSPVAKMTTVKTLLSV 1056
Score = 141 bits (355), Expect(3) = e-151
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 14/295 (4%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGL------TFPIRKSKAYVXXXX 3526
++DLG + YFLG E+ T +S+ Q K+ ELL D+GL T P+ S
Sbjct: 1184 LRDLGPMKYFLGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPS-------- 1235
Query: 3527 XXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQA--- 3697
ND ++ N YR +VGKL +LT TR D+ +++ L QF P+ HL+A
Sbjct: 1236 -LKLSQHNDEHVIDNPEVYRRLVGKLMYLTITRPDITYAINRLCQFSSSPKNSHLKAAQK 1294
Query: 3698 ----LKASLELCSQHSN-SRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLS 3862
LK ++ L +S+ S LK A S + + +
Sbjct: 1295 VVHYLKGTIGLGLFYSSKSDLCLKAYTDADWGSCVDSRRSTSGICMFLGDSLISWKSKKQ 1354
Query: 3863 H*LEK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHK 4042
+ E+ +RAMA + ++ W+V+LL V PV L CD +A+HIA N +FH+
Sbjct: 1355 NMASSSSAESEYRAMAMGSREIAWLVKLLAEFQVKQTKPVPLFCDSTAAIHIANNAVFHE 1414
Query: 4043 CTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVL 4207
TKHIE DCH T ++ +G+L + TT Q DVLTK L + L+ K+ +L
Sbjct: 1415 RTKHIENDCHITRDRIEQGMLKTMHVDTTSQLADVLTKPLFPTLFNSLIGKMSLL 1469
Score = 83.2 bits (204), Expect(3) = e-151
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIP------IPEGQVCRLRKSLYGLKQVFRQWFAK 3158
L++LDI+NAFL+GDL EE+YM P G +P+ V +L+KSLYGLKQ RQW+ K
Sbjct: 1064 LHQLDISNAFLNGDLKEEIYMTLPPGYSMKQGGVLPQNPVLKLQKSLYGLKQASRQWYLK 1123
Query: 3159 LSTALLSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
S+ L LG+ +S D++L+ + G+N ++I +LK L
Sbjct: 1124 FSSTLKKLGFKKSHADHTLFTRISGKAYIALLVYVDDIVIAGNNDENIEELKKDL 1178
>GAU20316.1 hypothetical protein TSUD_337970 [Trifolium subterraneum]
Length = 1403
Score = 357 bits (916), Expect(3) = e-151
Identities = 207/526 (39%), Positives = 292/526 (55%), Gaps = 3/526 (0%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYI--CQICPKARQYRQSFSSSTTKTNAPFDLIH 1596
H H+ RL I N PS+K + C +C A+Q R F ST +N+ FDL+H
Sbjct: 490 HLRFGHVSNKRLIEI-NKAFPSVKPISSPSPCDVCFYAKQKRLPFPLSTHISNSIFDLVH 548
Query: 1597 IDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIK 1776
+D WG + + GY YFLT+VDD +R TWT+ + KS P+++AF+ V TQF TT+K
Sbjct: 549 MDIWGPINVPSMLGYRYFLTVVDDKSRYTWTYFMKFKSETSPLIKAFVQMVKTQFQTTVK 608
Query: 1777 VIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNA 1956
IRSDN EF K +FYA I Q+SC TPQQNG+VERKH+H+L +RALLFQS+
Sbjct: 609 CIRSDNDNEFLIK---DFYAENDIIHQTSCVATPQQNGIVERKHQHILAVTRALLFQSHL 665
Query: 1957 PTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPART 2136
P FW + A +++N P L H SPFQ+L P + L+ FG LC+A + R
Sbjct: 666 PKTFWAHAVSHAIHIINRIPTTFLTHKSPFQILHNTLPDINFLKVFGSLCFATTLQTHRH 725
Query: 2137 KFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIPSTLPEI 2316
K D SR C+ +G+ G K Y ++DL ++ +F SRDV+F+E+ +P ++ PS+
Sbjct: 726 KLDSRSRKCIHLGFKTGVKGYLLFDLKSKELFLSRDVVFYEHIFPYQTSS---PSSSTNS 782
Query: 2317 PNDIPYHIYYPMVAHSEALDHSNIS-PGLSHDIPDTTHTNTNIMQTSTPSTHISYNHTTS 2493
N P+ P++ D N + P S+ +P T + + +S P T S
Sbjct: 783 TNLSPHP--PPLLDDVFTYDSVNTNPPPSSNHLPSTDNVPPSTTTSSLPHTRHS------ 834
Query: 2494 CDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVL 2673
S VP+ P +RKSTR P YL+DY C + L
Sbjct: 835 ------SPVPSPPPPPPPPIRKSTRQTHPPTYLQDYHCNL-------LSHTIHPSSSEAL 881
Query: 2674 HFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDG 2853
H SK A N W ++I E+ L +TW LV LP K+AI CKWI+K+KL ++G
Sbjct: 882 HSSSSK----ALHNKNWTNAIQAELTALMKTNTWSLVHLPAHKRAIGCKWIFKLKLHANG 937
Query: 2854 SVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVANH 2991
+++R+K RLV KGF Q G+DY++TFSPVVKM+TIR +LA+ + +
Sbjct: 938 TIERYKVRLVAKGFTQTEGLDYVDTFSPVVKMTTIRVLLALAASQN 983
Score = 132 bits (331), Expect(3) = e-151
Identities = 92/301 (30%), Positives = 148/301 (49%), Gaps = 8/301 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L YFLGFEV + T +S+ Q K+ +LL D+GLT +K
Sbjct: 1101 IKDLGVLKYFLGFEVARSKTGISLCQRKYTLDLLEDAGLT----GAKPCATPMQPHLQLH 1156
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
G L++ YR ++G+L +LT++R ++ ++V LSQF+ P + H+ A L+
Sbjct: 1157 KESGNPLSDPTTYRRLIGRLLYLTHSRPEIAYTVSKLSQFLSAPTDEHMLAGLHVLKYLK 1216
Query: 3725 QH--------SNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK* 3880
+ ++S +KG + + I + + + +
Sbjct: 1217 NNPGKGLLFSTSSSLKIKGFSDSDWGACPDTRRSTTGFCFFIGTSLVNWKSKKQSVVSRS 1276
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E +RA+A+AT + W++ LL + + P+ ++CD SA+HIA N +FH+ TKHIE
Sbjct: 1277 SSEAEYRALAQATCEGQWLLYLLKDFHITHDFPMVIYCDNQSALHIAANPVFHERTKHIE 1336
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHPPACGGV 4240
I+CH K+ G+L L + + Q +LTK L + L SKLG+ H GGV
Sbjct: 1337 INCHVVRDKIQAGILHLLPVSSKDQVAYILTKSLHPGPFNSLESKLGLF-DIHSSLRGGV 1395
Query: 4241 E 4243
+
Sbjct: 1396 K 1396
Score = 99.4 bits (246), Expect(3) = e-151
Identities = 51/110 (46%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPE-GQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L++LD+N AFLHGD +EEVYM+PP G+ +P VC+L+KSLYGLKQ RQW KL+ L
Sbjct: 986 LFQLDVNTAFLHGDFNEEVYMKPPPGLTLPHPDMVCKLQKSLYGLKQASRQWNTKLTDTL 1045
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
L GY QSK DYSL+ + G G++ ++I +K L
Sbjct: 1046 LHSGYIQSKADYSLFTKHSGAGFTVILVYVDDLVLGGTDMNEINAVKTLL 1095
>XP_015084421.1 PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
from transposon TNT 1-94 [Solanum pennellii]
Length = 1434
Score = 335 bits (860), Expect(3) = e-150
Identities = 181/501 (36%), Positives = 270/501 (53%), Gaps = 9/501 (1%)
Frame = +1
Query: 1510 CQICPKARQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWT 1689
C +CP A+Q RQ F SS ++ + FDL+H+D WG Y+ T + YFLTIVDD +R W
Sbjct: 540 CPVCPLAKQTRQVFPSSNSRASTSFDLVHMDLWGPYNISTLDKKHYFLTIVDDYSRFVWI 599
Query: 1690 HLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCT 1869
+LL +KS ++ F++ + TQF +KV DN EF ++ + GI QSSC+
Sbjct: 600 YLLQLKSETVVAIKMFLSMIKTQFGAHVKVX--DNGTEFFNSQCIKLFHELGILHQSSCS 657
Query: 1870 HTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQ 2049
+TPQQNGVVERKH+ +L +RA+ FQS P ++WG C+ A YL+N P S+++ SP++
Sbjct: 658 YTPQQNGVVERKHRQILNIARAIRFQSKMPIRYWGYCVKAAVYLMNRLPSSSISNKSPYE 717
Query: 2050 MLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTV 2229
+L+ P+ HL+ GCLCYA + P KF + + +GY +K Y + D+ ++
Sbjct: 718 LLYSKTPTLDHLKVIGCLCYATV-MPKGDKFAERAVPTILLGYSELQKGYMLLDIKSKRF 776
Query: 2230 FTSRDVIFHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHD 2409
F SRDV+FHEN +P + + E D+ P+ AL ++ P +
Sbjct: 777 FVSRDVVFHENVFPFCTKE-----AYAEASTDV---CGSPLDIIDNALTDCDVEPAKDTE 828
Query: 2410 IPDTTHTNTNIMQTSTPSTHISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMY 2589
D N N + D+ ++ A T +R+++R P++
Sbjct: 829 THDDNAGNANALYD---------------DNAENTIATEAVERPTTSIRRTSRRIKEPVW 873
Query: 2590 LKDYV--CQIDTXXXXXXXXXXXXXXXXVLHF-------FESKSYKQASKNPKWIDSINN 2742
+KDY Q T F E K + QA+K+ +WI ++
Sbjct: 874 MKDYTKGKQSSTRHPIANSLSYDKTTSGYKAFVSKFSECIEPKFFHQAAKDDRWIQAMQQ 933
Query: 2743 EINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYL 2922
EI L N+TW +V LP G + KWIYKIK K+DG V+RFKARLV KG+ Q+ G+DY
Sbjct: 934 EIQALEENNTWSIVDLPKGMHTVGSKWIYKIKYKADGQVERFKARLVAKGYSQQEGLDYH 993
Query: 2923 ETFSPVVKMSTIRCILAIVVA 2985
+TFSPV KM T+RC++A+ V+
Sbjct: 994 DTFSPVAKMVTVRCVIALAVS 1014
Score = 147 bits (370), Expect(3) = e-150
Identities = 102/305 (33%), Positives = 152/305 (49%), Gaps = 17/305 (5%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLT------FPIRKSKAYVXXXX 3526
+KDLG L +FLG EV+ + + + Q K+V EL+S++GLT PI +S +
Sbjct: 1134 MKDLGELRFFLGIEVLRSAEGVILNQRKYVLELISEAGLTGAKPSTTPI-ESNLRLTSVE 1192
Query: 3527 XXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKA 3706
+ +L + Y+ ++GKL + T TR D+ ++VQ+LSQFMQ P+ H A
Sbjct: 1193 YDQANGYTEDVILQDVTAYQRVIGKLLYATITRPDISYAVQVLSQFMQAPKRSHWDAAMR 1252
Query: 3707 SLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*L----- 3871
++ L+ K A S + N + G+ + L
Sbjct: 1253 VIKYLKGTVGQGIWLQS-KPANELSCWCDSDWAACPNTR--RSITGYVVKFGESLVSWKS 1309
Query: 3872 ------EK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLI 4033
+ E +R+MA A S+VTW++ L LGV +P+ + D SA+ +A N +
Sbjct: 1310 KKQQTVSRSSAEAEYRSMASAVSEVTWLLGLFTDLGVTIHMPILVFSDSKSAIQLAANPV 1369
Query: 4034 FHKCTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPS 4213
FH+ TKHIEIDCHF K+ +++ + T Q D+LTK L QHSYLL KLGVL
Sbjct: 1370 FHERTKHIEIDCHFIRDKIKAKVISTVHVHTQQQLADLLTKGLNRTQHSYLLGKLGVLNI 1429
Query: 4214 THPPA 4228
HP A
Sbjct: 1430 LHPSA 1434
Score = 105 bits (262), Expect(3) = e-150
Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Frame = +3
Query: 2994 PLYKLDINNAFLHGDLHEEVYMQPPEGIPIP-EGQVCRLRKSLYGLKQVFRQWFAKLSTA 3170
P+Y++D+ NAFL GDL EEVYM+ PEG P E +VC+L KSLYGLKQ RQW KLS A
Sbjct: 1018 PMYQMDVYNAFLQGDLEEEVYMEMPEGFRKPGENKVCKLLKSLYGLKQASRQWNLKLSNA 1077
Query: 3171 LLSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDLQ 3332
L++ G+SQS DYSL+ L+ D TGSN I + K +L Q
Sbjct: 1078 LVAAGFSQSGYDYSLFTLKKDADIVIVLVYVDDLLITGSNTKMINEAKENLHKQ 1131
>KYP34293.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1376
Score = 345 bits (885), Expect(3) = e-150
Identities = 210/558 (37%), Positives = 297/558 (53%), Gaps = 29/558 (5%)
Frame = +1
Query: 1390 KTLFVHDTFFCHNILDHLPLD----RLSHIHNLPVPSMKSL--------GYICQICPKAR 1533
K F+H T H D +P+D RL H+ N + +M+ L + C IC A+
Sbjct: 426 KPPFIHSTII-HPKCDVIPIDLWHFRLGHLSNTRLHNMQQLYPCLTINKDFTCNICHYAK 484
Query: 1534 QYRQSFSSSTTKTNAPFDLIHIDTWGSYHT-KTYNGYSYFLTIVDD*TRLTWTHLLVVKS 1710
Q + SFSSS + + PF L+H+D WG Y + +G+ +F TIVDD T TW L++ KS
Sbjct: 485 QRKLSFSSSHSTASRPFSLLHMDIWGPYSCISSIHGHKFFFTIVDDNTHFTWIFLMINKS 544
Query: 1711 NAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNG 1890
+ FI + QFNT I+ I++DN EF + F+ SKGI Q++C TPQQNG
Sbjct: 545 ETRMHISNFINLIENQFNTRIQTIQTDNGAEFLMQN---FFNSKGIVHQTTCIETPQQNG 601
Query: 1891 VVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAP 2070
VVERKH+HLL + ALLF S P FW LL ATYL+N P L++ +PFQ L+
Sbjct: 602 VVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKLYGQTC 661
Query: 2071 SYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVI 2250
+ LR FGCLCY + R K D + CVF+G+ K Y YDL T+ + SR+V
Sbjct: 662 DITELRVFGCLCYVSTSTANRKKLDPRAHPCVFLGFSPTTKGYITYDLHTRAITISRNVS 721
Query: 2251 FHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHT 2430
F+EN +P+ L S+ IP P HS + D +I P D T
Sbjct: 722 FYENHFPL----LQSTSSTSNIPVVSPISFGI----HSPSHDLISILP----DPHQHNVT 769
Query: 2431 NTNIMQTSTPSTHISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQ 2610
+ N TS S ++ ++T+ DSL + P +R+STRL+ P YL+DY
Sbjct: 770 SPNPATTSHDSISLA-PYSTTADSLPPNSSP---------LRRSTRLRNPPSYLQDYHHS 819
Query: 2611 IDTXXXXXXXXXXXXXXXXVLH----------------FFESKSYKQASKNPKWIDSINN 2742
+ + + + E SY +A+K+ W+ +++
Sbjct: 820 LTSTSTNLHPGMLYPIEKYISYSRLSNDFQAFVSSISAVSEPHSYAEAAKHDCWLKAMHA 879
Query: 2743 EINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYL 2922
E+ L N TW L PLPP K+A+ C+WIYKIK +DGS++R+KARLV KG+ Q G+DYL
Sbjct: 880 ELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIERYKARLVAKGYTQVEGLDYL 939
Query: 2923 ETFSPVVKMSTIRCILAI 2976
TFSPV K++T+R +LA+
Sbjct: 940 ATFSPVAKLTTVRLLLAL 957
Score = 143 bits (361), Expect(3) = e-150
Identities = 97/289 (33%), Positives = 140/289 (48%), Gaps = 8/289 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L YFLG EV + + ++Q K+V ++LSD G+ S+
Sbjct: 1080 IKDLGNLKYFLGLEVARNKSGIHLSQRKYVLDILSDCGMM----ASRPVSTPMDYTSRLS 1135
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
+ G LA+ YR ++G+L +LT TR D+ + V LSQFM P H QA+ L
Sbjct: 1136 ASSGTPLADPSSYRRLLGRLIYLTTTRPDISYVVHHLSQFMSAPSTAHSQAIFRILRYLK 1195
Query: 3725 QH--------SNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK* 3880
Q +NS HLK + A + + + + + +
Sbjct: 1196 QAPGSGLFFPTNSSLHLKAFSDSDWAGCLDTRRSITGFSVYLGDSLISWRSKKQPTVSRS 1255
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E +RA+A TS++ W+ LL L V P L+CD SA+HIA N +FH+ TKHI+
Sbjct: 1256 SSEAEYRALATTTSELQWLTYLLHDLHVPVHQPALLYCDNQSALHIAANQVFHERTKHID 1315
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVL 4207
IDCH +K+ GLL L + + Q D+ TK L + L SKLG+L
Sbjct: 1316 IDCHLVREKLQSGLLKLLPVASPHQLADIFTKSLSPSMFTALYSKLGML 1364
Score = 98.6 bits (244), Expect(3) = e-150
Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGI-PIPEGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L +LD+NNAFLHGDL+EEVYM P G+ P QVC+L+KSLYGLKQ RQWFAKLS+ L
Sbjct: 965 LKQLDVNNAFLHGDLNEEVYMTLPLGMRPEYSNQVCKLQKSLYGLKQASRQWFAKLSSFL 1024
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDL 3329
+ GY QS +D+SL+ + T G+N +I + LD+
Sbjct: 1025 IHHGYHQSASDHSLFMKFSSSSTTALLIYVDDIVLAGNNLSEIQLITGLLDV 1076
>ABH07899.1 putative polyprotein [Solanum lycopersicum]
Length = 1428
Score = 347 bits (890), Expect(3) = e-150
Identities = 186/507 (36%), Positives = 280/507 (55%), Gaps = 15/507 (2%)
Frame = +1
Query: 1510 CQICPKARQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWT 1689
C +CP A+Q R +F STT+T+ FD++H+D WG Y T T N YFLTIVDD +R W
Sbjct: 534 CPVCPLAKQTRLTFPVSTTRTSMMFDVVHMDLWGPYKTPTLNRKHYFLTIVDDYSRFVWV 593
Query: 1690 HLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCT 1869
HLL +KS ++ F + + TQFN+ +KV+RSDN EF + + GI QSSC
Sbjct: 594 HLLQLKSETIVAIKNFFSMINTQFNSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQSSCP 653
Query: 1870 HTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQ 2049
HTPQQNGVVERKH+H+L +RA+ FQ++ P +FWG C+ A YL+N P + ++ S ++
Sbjct: 654 HTPQQNGVVERKHRHILNIARAIRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSAYE 713
Query: 2050 MLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTV 2229
+L+ PS HL+ GCLCYA P KF + + +GY +K Y + D+ + V
Sbjct: 714 LLYCKQPSLFHLKVIGCLCYAT-TVPKGDKFSARASAAILLGYSELQKGYVLLDIHSTKV 772
Query: 2230 FTSRDVIFHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHD 2409
+RDV+FHE +P + S L + + H L+ + + + +
Sbjct: 773 HVNRDVVFHEEIFPFAKER----SQLDPLGD-----------VHGSPLEKAE-NQTIEAE 816
Query: 2410 IPDTTHTNTNIMQTSTPSTHI-SYNHTTSCDSLLHSFVPNAPHTL-THV---VRKSTRLK 2574
I ++ H T+++ + SY+ V H + +HV VR+S+R
Sbjct: 817 IDNSVHAETSMVHEDSQGNETESYSENQMSRPSTTEEVSENTHAIPSHVDSYVRRSSRNI 876
Query: 2575 TTPMYLKDYVC----------QIDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKW 2724
PM++KDY + + E K++KQAS++ +W
Sbjct: 877 KEPMWMKDYTITKGHSSTKHPMASYLNYEKLKPECRSFLSKLSEYTEPKNFKQASQDERW 936
Query: 2725 IDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQK 2904
I ++ EI L N+TW++V LP G A+ KWIYK+K K++G ++RFKARLV KG+ Q+
Sbjct: 937 IQAMKQEIKALEENNTWQVVELPEGMHAVGSKWIYKVKYKANGEIERFKARLVAKGYSQQ 996
Query: 2905 YGIDYLETFSPVVKMSTIRCILAIVVA 2985
G+DY +TFSPV KM T+RC++A+ V+
Sbjct: 997 EGLDYHDTFSPVAKMVTVRCVIALAVS 1023
Score = 143 bits (361), Expect(3) = e-150
Identities = 93/294 (31%), Positives = 149/294 (50%), Gaps = 6/294 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLT------FPIRKSKAYVXXXX 3526
+KDLG L +FLG EV+ + + + Q K++ EL++++GLT P+ +S +
Sbjct: 1143 LKDLGELKFFLGIEVLRSSGGIILNQRKYILELIAEAGLTGAKPATAPM-ESNLRLTSVE 1201
Query: 3527 XXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKA 3706
N +L + Y+ ++GKL ++T TR D+ ++VQ LSQFMQ P++ H++A
Sbjct: 1202 HDQANGYNKDDVLHDITSYQRLIGKLIYVTITRPDISYAVQTLSQFMQSPKKSHIEAATR 1261
Query: 3707 SLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK*EV 3886
+ L + +I + + G+ + +
Sbjct: 1262 VIRYLKGSVGQGVWLHSEPTNIITCWCDSDWAACPNTRR---SITGYVIKFG----ESSA 1314
Query: 3887 ENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIEID 4066
E +R+MA A S++TW++ L LGV LP+T+ D SA+ +A N + ++ TKHIEID
Sbjct: 1315 EAEYRSMASAVSEITWLLGLFKELGVNVQLPITIFSDSKSAIQLAANPVLYERTKHIEID 1374
Query: 4067 CHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHPPA 4228
CHF K+ G + A + T Q D+LTK L QH +LL KLGV+ H A
Sbjct: 1375 CHFIRDKIKAGEVNTAYVHTQQQLADILTKGLSQVQHVHLLGKLGVINVMHSVA 1428
Score = 95.5 bits (236), Expect(3) = e-150
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIP-EGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
LY++D+ NAFL G L EEVYM+ PEG P E +VC+L KSLYGLKQ RQW KL+ L
Sbjct: 1028 LYQMDVYNAFLQGVLGEEVYMKMPEGFAKPGENKVCKLLKSLYGLKQASRQWNLKLTKVL 1087
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDLQ 3332
+ G+SQS +DYSL+ L+ TGSN I ++KA L Q
Sbjct: 1088 QATGFSQSAHDYSLFTLKRGEDIVIVLVYVDDLLITGSNMQLIAEVKACLHKQ 1140
>KZV53534.1 hypothetical protein F511_42283 [Dorcoceras hygrometricum]
Length = 1012
Score = 334 bits (856), Expect(3) = e-144
Identities = 185/499 (37%), Positives = 271/499 (54%), Gaps = 6/499 (1%)
Frame = +1
Query: 1507 ICQICPKARQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTW 1686
+C +C ++Q R F S F+L+HID WG + + +GY +FLTIVDD TR TW
Sbjct: 146 LCHVCHMSKQKRLPFESHNKTAAHSFELLHIDVWGPFSKYSVDGYRFFLTIVDDHTRFTW 205
Query: 1687 THLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSC 1866
++L KS I F V TQF IK +RSDNAP+ + ++ GI SC
Sbjct: 206 VYMLRSKSEVSSIFPMFCRMVDTQFGAKIKSVRSDNAPDLG---FINLFSELGIVHTYSC 262
Query: 1867 THTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPF 2046
PQQN +VERKH+H+L +RAL+FQS+ P +W +C++T+ YL+N P L+H +PF
Sbjct: 263 VERPQQNSIVERKHQHILNVARALMFQSSVPIDYWSDCIVTSMYLINRTPSSILHHKTPF 322
Query: 2047 QMLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQT 2226
++L P+YSHL+ FGCLCYA+ +R KF + CVF+GYP G + YK+ +L T
Sbjct: 323 ELLHGKPPAYSHLKIFGCLCYASTLMSSRHKFSPRAIKCVFLGYPPGYRGYKLLNLDTNE 382
Query: 2227 VFTSRDVIFHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSH 2406
+ S DVIFHE+ +P + + P +I+ + HS ++ SH
Sbjct: 383 ILISCDVIFHEHEFPFQNTYNS---------DSQPSYIFSDNLLPV----HSQLNN--SH 427
Query: 2407 DIPDTTHTNTNIMQTST----PSTHISYNHTTSCDSLLHSFVPNAP--HTLTHVVRKSTR 2568
IPD + + S P H+ H +HS P+ H L + V S
Sbjct: 428 TIPDPISSKSKQQSRSQRILQPPHHLQNYHC-----YMHSSSPSTSTSHPLCNFVNYS-- 480
Query: 2569 LKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEI 2748
K +P++ ++ V I + E ++ QA P+W ++++E+
Sbjct: 481 -KLSPLH-RNLVNNISS-------------------IVEPTTFSQAVAIPEWKQAMSDEL 519
Query: 2749 NVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLET 2928
L N TW +V LPPGK + C+W+YK K +DGS++R+KARLV KG+ Q+ G+DYLET
Sbjct: 520 KALELNHTWSIVSLPPGKSVVGCRWVYKAKFAADGSLQRYKARLVAKGYTQQEGLDYLET 579
Query: 2929 FSPVVKMSTIRCILAIVVA 2985
FSPV KM T+R +LA+ A
Sbjct: 580 FSPVAKMVTVRTLLALAAA 598
Score = 137 bits (346), Expect(3) = e-144
Identities = 93/288 (32%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
+KDLG L YFLG EV + +S+ Q + L+++GL +S
Sbjct: 722 LKDLGKLKYFLGIEVARSSRGISICQRNYAMNFLTEAGLMGCRPRSTPM----EANVKIT 777
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
DG++L + YR ++G+L +LT TR DL F+V LSQ++ PR H++A L
Sbjct: 778 QEDGEILPDPSSYRRLIGRLLYLTVTRPDLAFAVNKLSQYVSKPRLPHMEAALNILRYVK 837
Query: 3725 --------QHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK* 3880
SNS LK A + + + + H + +
Sbjct: 838 GTIGQGLYYGSNSDLRLKFFSDADWGACLDTRRSVTGYCVFLGESMISWRAKKQHTVSRS 897
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E +R+MA AT ++ W+ LL LGV P TL CD +A+HIA N +FH+ TKHI+
Sbjct: 898 SAEAEYRSMAAATCEILWIRSLLTDLGVKCDGPATLFCDSQAAIHIASNPVFHERTKHID 957
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGV 4204
IDCH +KV +G++ L + + Q D+ TK L + LLSK+G+
Sbjct: 958 IDCHVIREKVQQGIVKLMHVSSVQQLADLFTKALLTSRFRSLLSKMGI 1005
Score = 94.0 bits (232), Expect(3) = e-144
Identities = 52/115 (45%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPP-----EGIPIPEGQVCRLRKSLYGLKQVFRQWFAKL 3161
L +L ++NAFLHG+L EEVYM P EG P+P VC+L KSLYGLKQ RQWFAK
Sbjct: 603 LIQLHVHNAFLHGELDEEVYMSLPPGYSSEGGPLPPQSVCKLHKSLYGLKQASRQWFAKF 662
Query: 3162 STALLSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLD 3326
S+ LLS+G+SQS D SL+ D +N++ ++LK+ L+
Sbjct: 663 SSTLLSVGFSQSHADNSLFIKVRDNVFLVLLVYVDDIVIATNNEEAASELKSFLN 717
>KHN05285.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1346
Score = 343 bits (879), Expect(3) = e-143
Identities = 203/546 (37%), Positives = 290/546 (53%), Gaps = 28/546 (5%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYICQICPKARQYRQSFSSSTTKTNAPFDLIHID 1602
H L HL R++ +H+ + +C IC A+ + F S K FDLIH D
Sbjct: 437 HFRLGHLSSSRIALLHSQFPFIVNDSSSVCDICHFAKHRKLPFVHSYHKAIKCFDLIHFD 496
Query: 1603 TWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIKVI 1782
WG K+ + ++YFLT VDD +R TW L+ KS A ++ FI ++ TQ+N ++K I
Sbjct: 497 IWGPISIKSVHNHAYFLTAVDDHSRYTWITLMKNKSEARLHVQNFIHFIKTQYNHSVKSI 556
Query: 1783 RSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNAPT 1962
R+DN PEF +FYASKGI Q+SC +PQQNG VERKH+ +L RALL QSN P
Sbjct: 557 RTDNGPEF---LMPDFYASKGILHQTSCVDSPQQNGRVERKHQQILNIGRALLVQSNLPK 613
Query: 1963 QFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKF 2142
FW + A Y++N P P+L + SP+ +L+ AP + L+ FG L +A+ + RTK
Sbjct: 614 SFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTAPDFDTLKVFGSLVFASTLQSHRTKL 673
Query: 2143 DRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIP---STLPE 2313
D +R CVF+GY G K + DL ++F SRDV HE+ +P S+ P ++
Sbjct: 674 DLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDVTHHEHIFPYQSSSPKTPWEYHSISP 733
Query: 2314 IPNDIPYHIYYPM-----VAHSEALDHSNISPGLSHDIPDTTHTNTNIMQTSTPSTHISY 2478
PND + + S + HS++SP +S+D T I TST ST
Sbjct: 734 TPNDSDITLDSDISLDINAEQSPSPPHSSLSPNISND--------TVISDTST-STPPPK 784
Query: 2479 NHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQIDT------------- 2619
+H S LLHS K R + P++L DYVC +
Sbjct: 785 DHNDS--PLLHS--------------KPIRQRRAPLHLSDYVCHNTSPTSHESLTSGTKS 828
Query: 2620 -------XXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWE 2778
+ H E +SY++ASK+ W+ ++ E+N L+ N TW+
Sbjct: 829 KYPLSSFHSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHWVTAMKEELNALAKNCTWK 888
Query: 2779 LVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTI 2958
+V LPP K I CKW+YK+K K++G ++R+KARLV KG+ Q GIDY ETFSPV K++T+
Sbjct: 889 IVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQVEGIDYFETFSPVAKITTV 948
Query: 2959 RCILAI 2976
R +LA+
Sbjct: 949 RTLLAV 954
Score = 123 bits (309), Expect(3) = e-143
Identities = 86/274 (31%), Positives = 125/274 (45%), Gaps = 8/274 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IK+LG L YFLG EV + ++++Q K+ +LL DSGL K
Sbjct: 1077 IKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLLKDSGLL----GCKPASTPLDTSIKLH 1132
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
G A+ YR +VGKL +L TR D+ F+ Q LSQFMQ P H A L
Sbjct: 1133 SAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLSQFMQAPTNVHFNAACRVLRYLK 1192
Query: 3725 QHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGH------TWRLSH*--LEK* 3880
+ + +++ C +WR + +
Sbjct: 1193 NNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGYCFFIGKSLVSWRAKKQATVSRS 1252
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E +RA++ A ++ W++ L L V TL+CD SA+HIA N +FH+ TKH+E
Sbjct: 1253 SSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYCDNQSAVHIASNPVFHERTKHLE 1312
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVL 4162
IDCH +K+++G L L + T+ Q D LTK L
Sbjct: 1313 IDCHLVREKLLKGTLKLLPVSTSDQVADFLTKAL 1346
Score = 95.9 bits (237), Expect(3) = e-143
Identities = 50/112 (44%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPE-GQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L++LD+NNAFLHGDL E+VYM+ P+G+ + VC+L+KSLYGLKQ R+W+ KL+ L
Sbjct: 962 LHQLDVNNAFLHGDLQEDVYMKIPDGVTCAKPNSVCKLQKSLYGLKQASRKWYEKLTNLL 1021
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDL 3329
L GY QS +DYSL+ L G + D+ ++K LDL
Sbjct: 1022 LKEGYIQSISDYSLFTLTKGNTFTALLVYVDDIILAGDSIDEFDRIKNVLDL 1073
>GAU47513.1 hypothetical protein TSUD_138850 [Trifolium subterraneum]
Length = 1469
Score = 310 bits (795), Expect(3) = e-142
Identities = 198/593 (33%), Positives = 292/593 (49%), Gaps = 68/593 (11%)
Frame = +1
Query: 1402 VHDTFFCHNILDHLPLDRLSHIHNL-PVPSMKSLGYICQICPKARQYRQSFSSSTTKTNA 1578
+ D H L H ++S + ++ P ++ + G +C IC A+ + + S K
Sbjct: 495 IPDQALWHFRLGHTSNTKMSLLQSVFPFITVDNKG-VCDICHLAKHKKLYYKVSMNKATV 553
Query: 1579 PFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQ 1758
P++LIH D WG +K+ + ++YFLT VDD +R TW L+ KS A + FI + TQ
Sbjct: 554 PYELIHFDIWGPIASKSIHNHAYFLTAVDDYSRFTWVTLMKHKSEARQHVINFIKLIETQ 613
Query: 1759 FNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRAL 1938
N+ +K++R+ N EF +FYASKGI Q+SC TP+QNG VERKH+HLL RAL
Sbjct: 614 HNSKVKIVRTYNGVEF---LMPQFYASKGIVHQTSCVETPEQNGRVERKHQHLLNVGRAL 670
Query: 1939 LFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAI 2118
LFQ++ P FW + ATY++N P L++ SP+++L V P L+ FG L YA+
Sbjct: 671 LFQAHLPKMFWSYAVQHATYIINRVPSVVLSNKSPYELLHNVLPDIKDLKVFGSLAYAST 730
Query: 2119 DKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIP 2298
+ RTK +R C+F+GY G K +YDL ++ +F SR+V H++ P
Sbjct: 731 LQSHRTKLTPRARKCIFLGYKQGVKGTILYDLHSKDIFISRNVTHHDHILP--------- 781
Query: 2299 STLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHTNTNIMQ---TSTPS-- 2463
Y P HS H++ P ++P+T HT+ N Q TSTP
Sbjct: 782 --------------YKPQSDHSLWHFHTSSEPT---NVPETIHTSFNSDQPVDTSTPHEH 824
Query: 2464 -------------------------THISYNHTTSC----DSLLHSFVPNAPHTLTHVV- 2553
+HIS T C D+L P +P +++ +
Sbjct: 825 VTVIEPTQNLSNDVQLVVPSDIAEPSHISDTCNTQCTNHNDALNQPAQPLSPLLISNHLD 884
Query: 2554 --------------RKSTRLKTTPMYLKDYVCQ------------------IDTXXXXXX 2637
+STRLK P YL DYVC D
Sbjct: 885 QTPALPTSSDSNPTHRSTRLKHAPSYLSDYVCNQSTTSPGTQSSSGSLYPISDYHSLKNL 944
Query: 2638 XXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISC 2817
+ H E KSY +A K W ++++E+ L+ TW +V LP K I
Sbjct: 945 SSIHHAFTVSLTHNTEPKSYLEACKFECWQKAMDDELEALTKTGTWVIVDLPSHIKPIGS 1004
Query: 2818 KWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAI 2976
KW+YK+K K+DG+++R+KARLV KG+ Q G+D+ +TFSPV K++T+R +LAI
Sbjct: 1005 KWVYKVKYKADGTIERYKARLVAKGYNQVEGLDFFDTFSPVAKLTTVRLLLAI 1057
Score = 143 bits (361), Expect(3) = e-142
Identities = 103/298 (34%), Positives = 149/298 (50%), Gaps = 12/298 (4%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L YFLG EV + ++++Q K+ +LL DSGL SK
Sbjct: 1180 IKDLGVLKYFLGLEVAQSREGITISQRKYCLDLLKDSGLL----GSKPASTPLDPAVKLH 1235
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
+D + N YR ++GKL +L NTR D+ F+ Q LSQF+ P H A +
Sbjct: 1236 IDDSKPYENVSLYRRLIGKLLYLCNTRPDISFATQQLSQFLHKPSVNHYHAACRVIRYL- 1294
Query: 3725 QHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*L----------- 3871
+H+ R L KS + F + G+ + L L
Sbjct: 1295 KHNPGRGLLFPRKSDIQLLGFSDSDWAGCLDTR--KSTSGYCFFLGSSLISWKAKKQTTI 1352
Query: 3872 EK*EVENRFRAMAKATSDVTWMVRLLDHLGV-INLLPVTLHCDKNSAMHIARNLIFHKCT 4048
+ E +RA++ AT ++ W+ L++ L V + LPV ++CD SA+HIA N +FH+ T
Sbjct: 1353 SRSSSEAEYRALSSATCELIWLTYLMNDLKVQCSKLPV-IYCDSQSALHIASNPVFHERT 1411
Query: 4049 KHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHP 4222
KH+EIDCH +KV +G+L L IPT Q D LTK L P+ + L+SKLG++ P
Sbjct: 1412 KHLEIDCHLVREKVQQGILRLLPIPTEEQLADCLTKSLAAPKFNELISKLGLIDIYQP 1469
Score = 105 bits (261), Expect(3) = e-142
Identities = 53/111 (47%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIP-IPEGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L++LD+NNAFLHG+L E+VYM PEG+ + + QVC+L+KSLYGLKQ R+W+ KL++ L
Sbjct: 1065 LHQLDVNNAFLHGELQEDVYMAIPEGVTTLKQNQVCKLQKSLYGLKQASRKWYEKLTSLL 1124
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLD 3326
+S GYSQS DYSL+ L N G++ ++IT++K LD
Sbjct: 1125 ISEGYSQSTADYSLFTLHNASHFTALLIYVDDIILAGTDLNEITRIKKILD 1175
>XP_019258757.1 PREDICTED: uncharacterized protein LOC109236973 [Nicotiana attenuata]
Length = 1552
Score = 461 bits (1185), Expect(2) = e-136
Identities = 248/540 (45%), Positives = 322/540 (59%), Gaps = 8/540 (1%)
Frame = +1
Query: 1417 FCHNILDHLPLDRLSHIHNLPVPSMKSLGYICQICPKARQYRQSFSSSTTKTNAPFDLIH 1596
F H L H+P +++ I L ++C +CP ARQ R FS S+ +N PF L+H
Sbjct: 722 FWHQRLGHMPFNKMKTIFFLSGKLSSKQPFLCSVCPMARQQRLPFSDSSIHSNVPFHLVH 781
Query: 1597 IDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIK 1776
ID WG YHT+TYNG+ YF+T+VDD +R+TWTHLL KS+A P+L+AF++ V F+++++
Sbjct: 782 IDIWGPYHTRTYNGFRYFITLVDDFSRVTWTHLLTCKSDALPVLKAFVSMVKVHFHSSVQ 841
Query: 1777 VIRSDNAPEFSGKTTLE-FYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSN 1953
+ RSDNA E G + + F++ GI Q+S HTPQQNGVVERKHKHLLE SRALLFQS
Sbjct: 842 IFRSDNAFELGGSSECKTFFSDNGILYQTSIPHTPQQNGVVERKHKHLLEVSRALLFQSK 901
Query: 1954 APTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPAR 2133
P ++WGEC+LTATYL N FP L +TSPF+ L +PSY HLR+FGCLC+A+ KP R
Sbjct: 902 LPLKYWGECVLTATYL-NRFPSSVLQNTSPFEKLHGNSPSYDHLRSFGCLCHASSPKPGR 960
Query: 2134 TKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIPST--L 2307
KF S VFIGYP GKK YK+ L ++F SRDV F+E +P HS P PST L
Sbjct: 961 DKFQSRSIPAVFIGYPCGKKGYKLLSLLNHSIFYSRDVHFYETIFPYHS---PTPSTVSL 1017
Query: 2308 PEIPNDIPYHIYYPMVAHSEALD--HSNISPGLSHDIPDTTHTNTNIMQTSTPSTHISYN 2481
P P + P AL H+ SP L H + NI P
Sbjct: 1018 PTPPIFVDTPSPPPSFPSQAALPTAHTPPSPVLHHSPIPISPLMPNISSPPHP------- 1070
Query: 2482 HTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQIDT---XXXXXXXXXXX 2652
S+L+ +P+ P +RKS+R P YL DYVC T
Sbjct: 1071 ------SILNQSLPSPP------IRKSSRYVNPPSYLSDYVCSYVTSSNTVLPSSSDSAP 1118
Query: 2653 XXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYK 2832
+ E + Y+QA +P W ++ E L N TW++VPLPP KKAI CKW+YK
Sbjct: 1119 LLSTSTISLHEPQYYQQAVSHPAWQQAMMKEFEALEANHTWDIVPLPPHKKAIPCKWVYK 1178
Query: 2833 IKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVANHCLCINWT 3012
IK KSDGS+ R+KARLV++G QK GIDY ETFSPVVKM+TI+C+L++ + NWT
Sbjct: 1179 IKQKSDGSIDRYKARLVIRGDTQKEGIDYTETFSPVVKMTTIKCLLSLAIKR-----NWT 1233
Score = 56.2 bits (134), Expect(2) = e-136
Identities = 37/112 (33%), Positives = 48/112 (42%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQVCRLRKSLYGLKQVFRQWFAKLSTALL 3176
+++LD+NNAFLHGDLHEEVYM+ P G+ ALL
Sbjct: 1234 VFQLDVNNAFLHGDLHEEVYMKIPPGLE-----------------------------ALL 1264
Query: 3177 SLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLDLQ 3332
S GY SKNDY L+ + + ++T LK LD Q
Sbjct: 1265 SRGYCSSKNDYFLFTKFSGDSLIVLAVYVDDILLARDDLSELTDLKKFLDNQ 1316
Score = 86.7 bits (213), Expect(2) = 4e-26
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = +3
Query: 3705 HLLNYVHNTPTQGIILKESNQLSLQAFSNFDWAACPSTRRSITGYVVTLGGCPISWKSKK 3884
H+L Y+ N P QGI+L +S SL+A+S+ DWAAC ++R+S+TG+ +TLGG PISWKSKK
Sbjct: 1386 HVLRYIMNAPAQGILLSQSPDYSLKAYSDTDWAACANSRKSVTGFFITLGGSPISWKSKK 1445
Query: 3885 *RTVS 3899
T+S
Sbjct: 1446 QPTIS 1450
Score = 63.5 bits (153), Expect(2) = 4e-26
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = +2
Query: 4004 SAMHIARNLIFHKCTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSY 4183
+A+H A+N +FH+ TKHIE+ CHF + +GL++L + + Q D++TK L H
Sbjct: 1466 AALHSAKNPVFHERTKHIEVYCHFVRDCLTDGLISLHFVSSNTQLADLMTKSLYGAAHRN 1525
Query: 4184 LLSKLGVLPSTHPPACGGVESYADHM 4261
+LSKLGV P P + G E+ +M
Sbjct: 1526 ILSKLGVFP---PSSLRGDENMDTNM 1548
>KYP58728.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1402
Score = 309 bits (792), Expect(3) = e-131
Identities = 184/531 (34%), Positives = 268/531 (50%), Gaps = 8/531 (1%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYI-CQICPKARQYRQSFSSS-TTKTNAPFDLIH 1596
H L H L++L + VP + L + C+ C + R SF +S ++ +PFD+IH
Sbjct: 472 HRRLGHPSLNKLKKM----VPHLSRLESLECESCQLGKHVRASFPNSINSRAMSPFDVIH 527
Query: 1597 IDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIK 1776
D WG + G+ Y++T +DD +R TW L+ +S F I +F + + TQF I+
Sbjct: 528 SDVWGPSRIPSLLGHRYYVTFIDDFSRCTWIFLMKNRSELFNIFLSFYSEIKTQFGKVIR 587
Query: 1777 VIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNA 1956
++RSDNA E+ F AS GI QSSC HTPQQNGV ERKH+H+++T+R LL +NA
Sbjct: 588 ILRSDNAKEYFSDCFKSFMASHGILHQSSCPHTPQQNGVAERKHRHIVDTARTLLLNANA 647
Query: 1957 PTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYS-HLRNFGCLCYAAIDKPAR 2133
P + WG+ +LTA YL+N P LN P +L+ + P YS H R FGC C+ R
Sbjct: 648 PPKLWGDAVLTAGYLINRMPSSVLNDQVPHSLLYPLDPLYSVHPRVFGCTCFVHDLFSGR 707
Query: 2134 TKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENW-YPIHSAQLPIPSTLP 2310
K + CVF+GY +K Y+ Y T +TS DV F E+ Y I + P+ S L
Sbjct: 708 AKLSARAIKCVFLGYSRVQKGYRCYSPATHRFYTSADVTFFEDTPYFIATDVSPVDSDLL 767
Query: 2311 EIPNDIPY--HIYYPMVAHSEALDHSNISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNH 2484
IP+ H P + PG H + T T P S
Sbjct: 768 SQVLPIPHFDHSVPPTTPATLEAPDPPALPGSDHPLHRFGITYERRSHTVVPPNDSSIEP 827
Query: 2485 TTSCDSLLHSFVPNAPHT--LTHVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXX 2658
S + + S P P + L +RK +R P + +++
Sbjct: 828 CDSTPASVSSPTPAPPTSVDLPIALRKGSRSTCNPHPIYNFL------SYHRLSPTYYAF 881
Query: 2659 XXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIK 2838
+ K+ ++A +P W ++ +E+ L +N TW LVP PPGK + C+W++ +K
Sbjct: 882 VSAIFSITIPKTVQEALTHPGWRQAMIDEMTALDSNHTWVLVPPPPGKSVVGCRWVFNVK 941
Query: 2839 LKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVANH 2991
+ DG V R KARLV KG+ Q YG+DY +TFSPV KM+++R LA+ H
Sbjct: 942 VGPDGQVDRLKARLVAKGYTQVYGLDYSDTFSPVAKMASVRLFLAMAAMRH 992
Score = 129 bits (324), Expect(3) = e-131
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Frame = +2
Query: 3368 KDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXXX 3547
KDLG L YFLG EV + + ++++Q K+ ++L ++GLT K
Sbjct: 1113 KDLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLT----DCKPVDTPMDPNVKLMP 1168
Query: 3548 NDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCSQ 3727
N G+ ++ YR +VGKLN+LT TR D+ F V ++SQF+ P E H A+ L +
Sbjct: 1169 NQGEPYSDPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYIKR 1228
Query: 3728 HS------NSRHH--LKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK*E 3883
N R H + G A A + + + + +
Sbjct: 1229 SPGKGLVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVVARSS 1288
Query: 3884 VENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIEI 4063
E +RAMA T ++ W+ L+ L + + L CD SA++++ N +FH+ TKHIE+
Sbjct: 1289 TEAEYRAMAHTTCELLWLKFLIQELQFCKVGHMELVCDNQSALYLSSNPVFHERTKHIEV 1348
Query: 4064 DCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKL 4198
DCHF +K++ G++ + + + Q D+ TK L P+ +Y+ +KL
Sbjct: 1349 DCHFIREKILSGIIKTSSVCSKNQLADIFTKSLRGPRITYICNKL 1393
Score = 82.8 bits (203), Expect(3) = e-131
Identities = 46/113 (40%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +3
Query: 2994 PLYKLDINNAFLHGDLHEEVYMQPPEGIPIP--EGQVCRLRKSLYGLKQVFRQWFAKLST 3167
PL++LDI NAFLHGDL EE+YM P G G VC+L+KSLYGLKQ R WF + S
Sbjct: 994 PLFQLDIKNAFLHGDLEEEIYMDQPPGFVAQGGSGLVCKLQKSLYGLKQSPRAWFGRFSK 1053
Query: 3168 ALLSLGYSQSKNDYSLYCLQND*GT-XXXXXXXXXXXXTGSNQDDITQLKAHL 3323
+ G + + D+S++ ++ TG +Q+ I LK HL
Sbjct: 1054 VIQEFGMIRCETDHSVFFRRSSTHRFIYLVVYVDDIVITGDDQEGIKALKQHL 1106
>OMO87137.1 Integrase, catalytic core [Corchorus capsularis]
Length = 1257
Score = 312 bits (799), Expect(3) = e-130
Identities = 173/444 (38%), Positives = 246/444 (55%), Gaps = 13/444 (2%)
Frame = +1
Query: 1684 WTHLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSS 1863
W +L+ KS L F + TQF +K IR+DN PEF L++Y GI LQ+S
Sbjct: 422 WVYLMKYKSEVSHYLIMFCNMIATQFGKKVKQIRTDNGPEFQSNCMLDYYKEHGIVLQTS 481
Query: 1864 CTHTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSP 2043
CT TPQQNGVVERKH+++LET+RAL FQ+N P +FWGEC+LTATY++N P +N+ +P
Sbjct: 482 CTDTPQQNGVVERKHRYVLETARALRFQANLPIRFWGECVLTATYIINRLPSKVINNKTP 541
Query: 2044 FQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQ 2223
F+MLF P Y HLR FGCL YA + KF + CVF+GYP G+K Y++YDL +
Sbjct: 542 FEMLFGKKPEYDHLRVFGCLVYAHDNSKRGDKFSERGKPCVFVGYPNGQKGYRVYDLKEK 601
Query: 2224 TVFTSRDVIFHENWYPI-----HSAQLPIPS-------TLPEIPNDIPYHIYYPMV-AHS 2364
+TSRDV F EN YP +S + + + L ND + P V
Sbjct: 602 KFYTSRDVTFFENIYPFRPNDCYSGETELTAGGEYCRPVLNAADNDCEEVMTLPQVKGLG 661
Query: 2365 EALDHSNISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNHTTSCDSLLHSFVPNAPHTLT 2544
A D ++ +IP+T + T++ T ++ +T+ + ++ S VP + +
Sbjct: 662 NAADRF-----IAEEIPETAAGDITAGVTASQETTVT--ESTAEEPVVSSAVPISGQSRV 714
Query: 2545 HVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKW 2724
VR+S R +T P + Q+ + A K+ W
Sbjct: 715 E-VRRSARERTQPKRFDGFDVQLPPSTVPAQPAL-------------PSADSSAVKHKHW 760
Query: 2725 IDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQK 2904
+++ EI L N TW+LVPLP K+AI KW+YK+K K +G ++R+KARLV KGF Q
Sbjct: 761 REAMEKEIQALEENGTWDLVPLPQDKRAIDSKWVYKVKFKPNGEIERYKARLVAKGFTQI 820
Query: 2905 YGIDYLETFSPVVKMSTIRCILAI 2976
G+D+ ETF+PV K+ T+RC+LAI
Sbjct: 821 EGVDFHETFAPVAKLVTVRCLLAI 844
Score = 118 bits (295), Expect(3) = e-130
Identities = 89/301 (29%), Positives = 139/301 (46%), Gaps = 14/301 (4%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGL------TFPIRKSKAYVXXXX 3526
IKDLG L YFLG E + + ++Q K+ ++L +SG+ FP+ ++
Sbjct: 967 IKDLGPLKYFLGIEAARSPAGIVLSQRKYALDILEESGMQGCKPSAFPMEQNHKL----- 1021
Query: 3527 XXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKA 3706
++G ++ +A YR +VG+L +LT TR DL F+V +LSQF+ PR+ H+ A
Sbjct: 1022 ----RADSNGPII-DAAQYRRLVGRLLYLTVTRPDLTFAVNVLSQFVSAPRQEHMDAALR 1076
Query: 3707 SLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEI---YHRVCGHT---WRLSH* 3868
L + L + + + Y G + WR
Sbjct: 1077 VLRYLKKAPGQGVLLSAKGDLFLIAYCDADWGGCLTTKRSCTGYFITLGGSPISWRTKRQ 1136
Query: 3869 --LEK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHK 4042
+ K E +RAMA S++ W+ LL L P L CD +A+HI N ++H+
Sbjct: 1137 EVVSKSSAEAEYRAMAVTVSELLWLWWLLTDLQSPQTEPTPLFCDNQAALHITANPVYHE 1196
Query: 4043 CTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHP 4222
TKH+E+DC+F +K + +I T Q D+ TK L + L+ KLGV + H
Sbjct: 1197 RTKHVEMDCYFVREKAQSREIAPRKISTCAQLADIFTKALGKDRFESLVFKLGV-ANLHA 1255
Query: 4223 P 4225
P
Sbjct: 1256 P 1256
Score = 89.7 bits (221), Expect(3) = e-130
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIP-IPEGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
+++LD+NN FLHGDL EEV+M+ P+G E +VC+L+KSLYGL+Q R W+ K + AL
Sbjct: 852 VHQLDVNNVFLHGDLEEEVFMKIPQGFAKAGETRVCKLKKSLYGLRQASRNWYHKFTKAL 911
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLD 3326
+G+ QSK D+SL+ G+N D I ++K++L+
Sbjct: 912 EDVGFRQSKADHSLFLYDKGETFLTALIYVDDVILAGNNGDKIQEVKSYLN 962
>CAC95126.1 gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 310 bits (794), Expect(3) = e-130
Identities = 190/542 (35%), Positives = 272/542 (50%), Gaps = 7/542 (1%)
Frame = +1
Query: 1372 FNITLSKTLFVHDTFFCHNILDHLPLDRLSHIHNLPVPSMKSLGYI-------CQICPKA 1530
F ++LS + F + H+ L H+ RL + S +LG + C C A
Sbjct: 469 FRLSLSSSSF----YLWHSRLGHVSSSRLRFL-----ASTGALGNLKTCDISDCSGCKLA 519
Query: 1531 RQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKS 1710
+ F+ ST+ +++PFDLIH D WG T G Y+++ +DD TR W +L+ +S
Sbjct: 520 KFSALPFNRSTSVSSSPFDLIHSDVWGPSPVSTKGGSRYYVSFIDDHTRYCWVYLMKHRS 579
Query: 1711 NAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNG 1890
F I AF A + TQ + IK R D E++ + A G Q+SCT TP+QNG
Sbjct: 580 EFFEIYAAFRALIKTQHSAVIKCFRCDLGGEYTSNKFCQMLALDGTIHQTSCTDTPEQNG 639
Query: 1891 VVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAP 2070
V ERKH+H++ET+R+LL + ++FWGE +LTA L+N P + SPF+ L+ P
Sbjct: 640 VAERKHRHIVETARSLLLSAFVLSEFWGEAVLTAVSLINTIPSSHSSGLSPFEKLYGHVP 699
Query: 2071 SYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVI 2250
YS R FGC + R K S CVF+GY GKK Y+ +D TQ ++ S V+
Sbjct: 700 DYSSFRVFGCTYFVLHPHVERNKLSSRSAICVFLGYGEGKKGYRCFDPITQKLYVSHHVV 759
Query: 2251 FHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHT 2430
F E H IPST + HI SE D N + I
Sbjct: 760 FLE-----HIPFFSIPSTTHSLTKSDLIHID----PFSE--DSGNDTSPYVRSICTHNSA 808
Query: 2431 NTNIMQTSTPSTHISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQ 2610
T + + TP S S S + + P + +RKST+L Y C
Sbjct: 809 GTGTLLSGTPEASFS-----STAPQASSEIVDPPPRQSIRIRKSTKLPDFA-----YSCY 858
Query: 2611 IDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPL 2790
+ FE SYK+A +P +++ E++ L DTW+LVPL
Sbjct: 859 SSSFTSFLAYIHC---------LFEPSSYKEAILDPLGQQAMDEELSALHKTDTWDLVPL 909
Query: 2791 PPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCIL 2970
PPGK + C+W+YKIK SDGS++R+KARLV KG+ Q+YG+DY ETF+P+ KM+TIR ++
Sbjct: 910 PPGKSVVGCRWVYKIKTNSDGSIERYKARLVAKGYSQQYGMDYEETFAPIAKMTTIRTLI 969
Query: 2971 AI 2976
A+
Sbjct: 970 AV 971
Score = 115 bits (287), Expect(3) = e-130
Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 13/302 (4%)
Frame = +2
Query: 3341 VMVIETEV-----IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSK 3505
+ V++TE+ +KDLGYL YFLG EV + ++Q K+V +L + LT +K
Sbjct: 1080 ISVLKTELARRFEMKDLGYLRYFLGIEVAYSPRGYLLSQSKYVANILERARLT----DNK 1135
Query: 3506 AYVXXXXXXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREF 3685
+DG L + YR++VG L +LT T D+ ++V ++SQF+ P
Sbjct: 1136 TVDTPIEVNARYSSSDGLPLIDPTLYRTIVGSLVYLTITHPDIAYAVHVVSQFVASPTTI 1195
Query: 3686 HLQALKASLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGH------ 3847
H A+ L L S + + +++ C
Sbjct: 1196 HWAAVLRILRYLRGTVFQSLLLSSTSSLELRAYSDADHGSDPTDRKSVTGFCIFLGDSLI 1255
Query: 3848 TWRLSH*--LEK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIA 4021
+W+ + + E + AMA T ++ W LL +G+ ++CD S++ IA
Sbjct: 1256 SWKSKKQSIVSQSSTEAEYCAMASTTKEIVWSRWLLADMGISFSHLTPMYCDNQSSIQIA 1315
Query: 4022 RNLIFHKCTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLG 4201
N +FH+ TKHIEIDCH T + G + L +P++ Q D TK + +L+ KL
Sbjct: 1316 HNSVFHERTKHIEIDCHLTRHHLKHGTIALPFVPSSLQIADFFTKAHSISRFCFLVGKLS 1375
Query: 4202 VL 4207
+L
Sbjct: 1376 ML 1377
Score = 94.0 bits (232), Expect(3) = e-130
Identities = 49/107 (45%), Positives = 62/107 (57%)
Frame = +3
Query: 3003 KLDINNAFLHGDLHEEVYMQPPEGIPIPEGQVCRLRKSLYGLKQVFRQWFAKLSTALLSL 3182
+LD+ NAFL+GDL EEVYM PP GI G VC+L+K+LYGLKQ R WF K S + SL
Sbjct: 981 QLDVKNAFLNGDLQEEVYMAPPPGISHDSGYVCKLKKALYGLKQAPRAWFEKFSIVISSL 1040
Query: 3183 GYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
G+ S +D +L+ D G TG + D I+ LK L
Sbjct: 1041 GFVSSSHDSALFIKCTDAGRIILSLYVDDMIITGDDIDGISVLKTEL 1087
>GAU38852.1 hypothetical protein TSUD_154140 [Trifolium subterraneum]
Length = 1494
Score = 309 bits (792), Expect(3) = e-129
Identities = 185/546 (33%), Positives = 275/546 (50%), Gaps = 18/546 (3%)
Frame = +1
Query: 1393 TLFVHDTFFCHNILDHLPLDRLSHIHNL-PVPSMKSLGYICQICPKARQYRQSFSSSTTK 1569
+L + + H H +RL + L P + + + C +C A+Q + + +S+++
Sbjct: 512 SLAIPNNALWHFRFGHTSQNRLEILQKLYPTIEVNKVDFCCDVCHLAKQRKLPYVTSSSR 571
Query: 1570 TNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYV 1749
+ +L+H+D WG + T T +G+ YFLTIVDD +R TW LL K ++ FI +
Sbjct: 572 ASVILELLHMDIWGPFSTSTTHGHKYFLTIVDDFSRFTWIVLLKGKYEVASKVQEFINFA 631
Query: 1750 TTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETS 1929
F +K +RSDN EF + +FY SKGI Q+SC +TPQQNG VERKH+ +L +
Sbjct: 632 ENHFCHKVKFLRSDNGQEFLSLS--KFYISKGIQHQTSCVYTPQQNGRVERKHQCILNIA 689
Query: 1930 RALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCY 2109
RAL+ QS+ P ++WG +L + +++N P +L PF L+ P S L+ FG LC+
Sbjct: 690 RALMTQSHLPAKYWGYAVLQSVFIMNRVPSNALKGQIPFVALYGKLPELSDLKVFGSLCF 749
Query: 2110 AAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQL 2289
+ R+K D +R CV++G G K Y DL + SR+V+F E +P
Sbjct: 750 VSTHDNQRSKLDPRARKCVYLGIKPGVKGYVALDLHNYEIIVSRNVVFEETIFP------ 803
Query: 2290 PIPSTLPEIPNDIPYHIYYPMVAHSEALDHSNISPGLSHDIPDTTHTNTNIMQTSTPSTH 2469
YP+ A ++ +P P T T T Q +T
Sbjct: 804 ------------------YPVSNSKTAWEYVEPTPNTH---PSTEPTKTRNSQETTDD-- 840
Query: 2470 ISYNHTTSCDSLLHSFVPNAPHTLTH-------VVRKSTRLKTTPMYLKDYVCQIDT--- 2619
+S NH L + T TH R+STR+K TP++L DY C T
Sbjct: 841 LSTNHDHDSIDLPLDQPSDRTTTSTHDQKFTNSSPRRSTRIKQTPLHLMDYQCNAITHKT 900
Query: 2620 -------XXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWE 2778
+L E +Y +ASK+ W+ ++ NE+ L+ N TW
Sbjct: 901 PYPISSFISHNNLSKSYSTFCLSLLADTEPTTYAEASKHECWVKAMKNELTALANNKTWI 960
Query: 2779 LVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTI 2958
+ LP G K I KW+YKIK K+DG++ R+KARLV KG+ Q G+D+ +TFSPV KM+TI
Sbjct: 961 ITDLPEGVKPIGSKWVYKIKRKADGTIDRYKARLVAKGYNQIEGVDFSQTFSPVAKMTTI 1020
Query: 2959 RCILAI 2976
R +LAI
Sbjct: 1021 RTVLAI 1026
Score = 129 bits (323), Expect(3) = e-129
Identities = 95/308 (30%), Positives = 144/308 (46%), Gaps = 8/308 (2%)
Frame = +2
Query: 3305 SAESTSGLTNTEVMVIETEVIKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLT 3484
S + + +T+ + + IKD+G L +FLG EV + +++ Q K+ +LL+D+G
Sbjct: 1129 SGNCLAEIESTKSQLHQAFGIKDIGVLKFFLGLEVAHSQQGITLCQRKYCLDLLNDTGNL 1188
Query: 3485 FPIRKSKAYVXXXXXXXXXXXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQF 3664
K +D + +N YR++VGKL +LT+TR D+ F VQ LSQF
Sbjct: 1189 ----GCKPSSIPMDPSNRLHHDDSEPHSNITEYRALVGKLLYLTSTRPDIAFPVQQLSQF 1244
Query: 3665 MQHPREFHLQALKASLELCSQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVC- 3841
+ P H +A L + + S + ++ C
Sbjct: 1245 LDAPTTAHFKAAHKVLRYLKGNPGTGLFFPRNASLQLMGFSDADWGGCPDSRRSITGYCF 1304
Query: 3842 --GHT---WRLSH*L--EK*EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDK 4000
G + W+ L K E +RA+A AT ++ W+ LL L V L+CD
Sbjct: 1305 FIGQSLICWKSKKQLTVSKSSSEAEYRALASATCELQWLSYLLKDLQVHIDKANVLYCDS 1364
Query: 4001 NSAMHIARNLIFHKCTKHIEIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHS 4180
SA+HIA N +FH+ TKH++IDCH +K+ GL+ L I QT D+LTK L
Sbjct: 1365 QSALHIASNPVFHERTKHLDIDCHIVREKLQAGLMKLLPISGYNQTADILTKALHPANFH 1424
Query: 4181 YLLSKLGV 4204
L SKLG+
Sbjct: 1425 RLFSKLGL 1432
Score = 77.0 bits (188), Expect(3) = e-129
Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIP-IPEGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
+++LD++NAFLHGDL E VYM P+ QVC+L+K LYGL+Q RQW+ KLS L
Sbjct: 1034 IHQLDVDNAFLHGDLDENVYMTVPQRFEGATSRQVCKLQKFLYGLRQASRQWYEKLSHFL 1093
Query: 3174 LSLGYSQSKNDYSLY 3218
+++GY +D +L+
Sbjct: 1094 ITIGYKHMPSDPTLF 1108
>OMO65653.1 hypothetical protein CCACVL1_21443 [Corchorus capsularis]
Length = 1245
Score = 282 bits (721), Expect(3) = e-128
Identities = 159/383 (41%), Positives = 213/383 (55%), Gaps = 5/383 (1%)
Frame = +1
Query: 1843 GISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLP 2022
GI Q SC TPQQNGVVERKH+H+L +RAL FQ+ P FWGEC+LTA YL+N P P
Sbjct: 473 GILHQMSCVDTPQQNGVVERKHRHILNVARALRFQAYLPLSFWGECVLTAVYLINYTPSP 532
Query: 2023 SLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYK 2202
L+ +PF+MLF P+Y HL+ FGCLCYA KF S C+F+GYP G K Y+
Sbjct: 533 LLDGKTPFEMLFSKPPAYDHLKVFGCLCYALQKPKPNDKFSPRSSKCIFVGYPNGTKGYR 592
Query: 2203 IYDLTTQTVFTSRDVIFHENWYPIHSAQLPIPSTLPEIPNDIPYHIYYPMVAHSE-ALDH 2379
+YDLTT+ +F SRDV F+EN +P + ST +P P + ++ ++ H
Sbjct: 593 VYDLTTKKIFVSRDVRFYENQFPFENT-----STSTNDQTVVP----LPALEDTDLSITH 643
Query: 2380 SNISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNHT--TSCDSLL--HSFVPNAPHTLTH 2547
+I P + P H TN + PST T D + +S V N+P +LTH
Sbjct: 644 DSIPPNPPQEQPQ-PHPPTN--PPNQPSTRPQRTKTRPKRLDDCVCNNSKVDNSPSSLTH 700
Query: 2548 VVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWI 2727
T +Y D E KS+ QA K+P+W
Sbjct: 701 EASSGT------LYSLSNFISYDNFHSSHKAFLAAISLRD-----EPKSFSQAVKSPQWR 749
Query: 2728 DSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKY 2907
+++ E+ L N+TW L LPP KK I CKWI+KIK KSDG+++R+KAR V KG+ Q
Sbjct: 750 EAMQKELAALENNNTWTLETLPPRKKPIGCKWIFKIKYKSDGTIERYKARFVAKGYNQIE 809
Query: 2908 GIDYLETFSPVVKMSTIRCILAI 2976
G+D+ ETF+PV K+ T+RC+LAI
Sbjct: 810 GMDFHETFAPVAKLVTVRCLLAI 832
Score = 135 bits (339), Expect(3) = e-128
Identities = 92/295 (31%), Positives = 139/295 (47%), Gaps = 8/295 (2%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVMVTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXXX 3544
IKDLG L YFLG EV + + + + Q K+ ++L + G+T +K
Sbjct: 955 IKDLGPLKYFLGIEVARSSSGIFLCQRKYTLDILEECGMT----DAKPSAFPMEQKHNLT 1010
Query: 3545 XNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELCS 3724
+ G + + YR +VG+L +LT TR ++ ++V +LSQFM PR+ HL A L
Sbjct: 1011 HDTGPPVQDPMQYRRLVGRLIYLTITRPEISYAVHILSQFMNDPRQPHLDAALRVLRYLK 1070
Query: 3725 Q--------HSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK* 3880
S+S HL G + AS + + + +
Sbjct: 1071 SCPGQGIFFSSSSSPHLTGFSDSDWASCPQTRRSTTGYITMLGSSPISWKTKKQTTVSRS 1130
Query: 3881 EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHIE 4060
E +RAMA S++ W+ LL LG+ + P+ L CD A+HIA N +FH+ TKHIE
Sbjct: 1131 SAEAEYRAMAATVSELLWLRSLLQTLGIPHQQPMALFCDNQVAIHIATNPVFHERTKHIE 1190
Query: 4061 IDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHPP 4225
+DCHF + + + I + Q D+ TK L Q +LL KLG+ + H P
Sbjct: 1191 LDCHFIRSHIQAKSIQTSHISSKLQLADIFTKALGRDQFQFLLRKLGIF-NLHAP 1244
Score = 97.4 bits (241), Expect(3) = e-128
Identities = 54/111 (48%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIP-EGQVCRLRKSLYGLKQVFRQWFAKLSTAL 3173
L++LD+NNAFLHGDL EEVYM P G + +VCR+RKSLYGLKQ R WFAK AL
Sbjct: 840 LHQLDVNNAFLHGDLDEEVYMSLPPGYGDKNDSRVCRVRKSLYGLKQASRNWFAKFFAAL 899
Query: 3174 LSLGYSQSKNDYSLYCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHLD 3326
L G+ QS DYSL+ L G + I LK HLD
Sbjct: 900 LEFGFIQSTVDYSLFTLTTGSSFLVVLVYVDDLIIAGDDSVRIRSLKQHLD 950
Score = 62.4 bits (150), Expect = 8e-06
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Frame = +3
Query: 231 SSPHIDNSMFPNSNPLQLHHSDQPKYVLSTSLLNQNNFHHWRRSP*WRRIN*ALLLGNLF 410
S I N M S+P L SD P +L + LN +N+ W R+ + AL N +
Sbjct: 16 SQTQISNCM-DLSSPYLLQPSDHPGAILVSCPLNGDNYPTWARA-----MTNALRARNKY 69
Query: 411 DLM-------------ILLKLCCSIGAPEW--S*LGFYIAESIIYCRTAAEIW-----SY 530
+ + C+ W + L + S+ Y TA E+W +
Sbjct: 70 GFVDGSLAKPEATSPDVSTWEKCNSMVISWIFNSLSSDLHNSVAYVDTAREMWLDLEERF 129
Query: 531 SQTNHVRIYHIQRDLALNSQGNTSIFVYFSQL*RLWDE---YLNMIECIDNSDVQLTSIL 701
SQ N RI ++RDLAL Q N S+ Y+++L +WDE Y + C + +L
Sbjct: 130 SQGNAPRINQLKRDLALTFQINMSVAAYYTKLKGIWDELQTYSTIPPCTCGAAKELLLER 189
Query: 702 QNQ*IMQLLMGLNDCYTTV*GTILMMKP 785
+ + + Q +MGL+D + +V IL ++P
Sbjct: 190 EREKVHQFIMGLDDSFRSVSSHILNIEP 217
>XP_015165967.1 PREDICTED: uncharacterized protein LOC107061351, partial [Solanum
tuberosum]
Length = 1059
Score = 436 bits (1121), Expect = e-128
Identities = 230/538 (42%), Positives = 318/538 (59%), Gaps = 20/538 (3%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYICQICPKARQYRQSFSSSTTKTNAPFDLIHID 1602
H L H+P ++ I ++PV + C ICP ARQ R F ST + A FDL+H+D
Sbjct: 490 HYRLGHVPFVKMKSISSIPVVFSSKQPFFCPICPMARQTRLPFQQSTHTSTAIFDLVHVD 549
Query: 1603 TWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIKVI 1782
WG Y T T++ + +FLT+VDD +R TWTHLL KSNA +++ F + V QF + IKVI
Sbjct: 550 LWGPYQTPTHDNFRFFLTLVDDFSRSTWTHLLSHKSNALHVIKTFTSMVENQFKSAIKVI 609
Query: 1783 RSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNAPT 1962
RSDN EF+ +++F+ SKGI SC +TPQQNGVVERKHK++LET+RALLFQS PT
Sbjct: 610 RSDNGLEFTNTESIQFFQSKGIIHHKSCPYTPQQNGVVERKHKYILETARALLFQSKLPT 669
Query: 1963 QFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKF 2142
++WGEC+LTATY++N P LN+ P+++L+ + P YSHLR+FGCLCY I K R+KF
Sbjct: 670 KYWGECILTATYIINRLPSVPLNNKCPYEVLYGLKPFYSHLRSFGCLCYPTIPKTQRSKF 729
Query: 2143 DRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHENWYPIHSAQLPIPSTLPEIPN 2322
+ + VF+GYPFG K YK+ L T+ ++ SRDVIFHE +P A P+ P P+
Sbjct: 730 EPRASPHVFVGYPFGMKGYKVMSLATKRLYVSRDVIFHETIFPF--AMTKDPTLFPSYPH 787
Query: 2323 DIPYHIYYPMVAHS----EALDHSNIS---------PGLSHDIPDTTHTNTNIMQT---- 2451
YP S DH +S P P ++T+T +Q
Sbjct: 788 CFTDQSAYPTSDSSFDPTVQCDHEMLSDTNPTLPPEPSSPPHHPSPSNTSTTPLQQVHQP 847
Query: 2452 --STPSTHISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMY-LKDYVCQIDTX 2622
+T +H ++ T +HS +P + T H +T T + LK ++ +
Sbjct: 848 DITTRKSHRTHKLPTYLSDYVHS-IPVSQPTDNHTSTPTTPTTLTACFSLKHHISPAELD 906
Query: 2623 XXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGK 2802
+ H E SY +A+ +P W ++ E L N+TW L+PLP GK
Sbjct: 907 PNSQVFALN------IAHDCEPSSYAEAALDPAWQTAMTQEFAALHDNNTWSLIPLPIGK 960
Query: 2803 KAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAI 2976
KAI C+W+YKIK K+DGSV+R+KARLVVKG+ Q GIDY ETFSPVVKM+T+R ++A+
Sbjct: 961 KAIGCRWVYKIKHKADGSVERYKARLVVKGYTQHLGIDYTETFSPVVKMTTVRALIAV 1018
Score = 68.2 bits (165), Expect(2) = 8e-11
Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
Frame = +3
Query: 480 IAESIIYCRTAAEIWS-----YSQTNHVRIYHIQRDLALNSQGNTSIFVYFSQL*RLWDE 644
IA+S+ Y +A E+W+ Y QTN ++Y IQ+++ QG + Y++++ +LW+E
Sbjct: 97 IADSVAYVDSALELWTDLEDRYDQTNGAKLYQIQKEINDLIQGVLDVTAYYTKMKKLWEE 156
Query: 645 YLNMIECIDN----------SDVQLTSILQNQ*IMQLLMGLNDCYTTV*GTILMMKP 785
++ CI N DV + + Q++ ++Q LMGLN+ YT + G ILMM P
Sbjct: 157 LSSL--CIKNHCSCACNCGAKDV-MHKVEQDRRLIQFLMGLNEIYTIIRGNILMMNP 210
Score = 30.4 bits (67), Expect(2) = 8e-11
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 362 ALMAKNKLGFVTGEFVRP-NDSTQALL*HRCTGMVIAWFLH 481
+L KNKLGF+ G+ +P + RC MV +W L+
Sbjct: 51 SLSVKNKLGFINGDSKKPLSTDPDYKQWERCDNMVTSWILN 91
>CAN74229.1 hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 410 bits (1053), Expect(2) = e-128
Identities = 220/522 (42%), Positives = 300/522 (57%), Gaps = 26/522 (4%)
Frame = +1
Query: 1504 YICQICPKARQYRQSFSSSTTKTNAPFDLIHIDTWGSYHTKTYNGYSYFLTIVDD*TRLT 1683
++C I P A+Q R SF SS ++APFDLIH D WG + +++G YFLTIVDD TR T
Sbjct: 159 HVCDIXPLAKQTRLSFPSSFISSHAPFDLIHCDIWGPHRINSHSGARYFLTIVDDHTRYT 218
Query: 1684 WTHLLVVKSNAFPILEAFIAYVTTQFNTTIKVIRSDNAPEFSGKTTLEFYASKGISLQSS 1863
W HL+ KS IL++FI++V TQFN IK +R+DN E S ++ +KGI+ S
Sbjct: 219 WIHLMSFKSETQGILQSFISWVETQFNRCIKTLRTDNGTEISSMK--QYLDTKGINYHHS 276
Query: 1864 CTHTPQQNGVVERKHKHLLETSRALLFQSNAPTQFWGECLLTATYLVNMFPLPSLNHTSP 2043
C +TPQQNGVVERKH+HLL RAL FQ+N P +FWGE + TA YL+N P P L+H SP
Sbjct: 277 CAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKSP 336
Query: 2044 FQMLFQVAPSYSHLRNFGCLCYAAIDKPARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQ 2223
+Q+L PSY HLR FGCLCYA P KFD+ +R C+F+GYP G+K Y++YDL T
Sbjct: 337 YQLLXNKLPSYHHLRTFGCLCYATNLLPTH-KFDQRARRCIFVGYPLGQKGYRVYDLETN 395
Query: 2224 TVFTSRDVIFHENWYPIHS---------AQLPIP----------STLPEIPNDIPYHIYY 2346
F+S DV+FHE+ +P H+ LP+P +T P+ + P
Sbjct: 396 KFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPP----- 450
Query: 2347 PMVAHSEALDHSN-------ISPGLSHDIPDTTHTNTNIMQTSTPSTHISYNHTTSCDSL 2505
P+++ E+ + +SP P T + I Q + + HT S
Sbjct: 451 PLLSSLESTSNERTLDLDTIVSPP-----PPATRRSDRIKQPNVXLRNFHLYHTAKVXSS 505
Query: 2506 LHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYVCQIDTXXXXXXXXXXXXXXXXVLHFFE 2685
S + H LT + + + +P Y +++VC I T E
Sbjct: 506 QSSSLSGTRHPLTRYI---SYAQLSPKY-RNFVCAITT-------------------LVE 542
Query: 2686 SKSYKQASKNPKWIDSINNEINVLSTNDTWELVPLPPGKKAISCKWIYKIKLKSDGSVKR 2865
+Y+QA +PKW +++ E++ L N TW L PLP G + I CKW+YKIK SDG+V+R
Sbjct: 543 PTTYEQAVLDPKWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVER 602
Query: 2866 FKARLVVKGFRQKYGIDYLETFSPVVKMSTIRCILAIVVANH 2991
+KARLV KGF Q+ GIDY ETFSPV K++T+RC+LAI H
Sbjct: 603 YKARLVAKGFTQREGIDYKETFSPVAKLTTVRCLLAIAAVRH 644
Score = 82.4 bits (202), Expect(2) = e-128
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Frame = +3
Query: 2997 LYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQ---VCRLRKSLYGLKQVFRQWFAKLST 3167
L+++D+ NAFLHGDL EEVYMQ P G +G+ VCR KSLYGLKQ R WF K S
Sbjct: 647 LHQMDVQNAFLHGDLLEEVYMQLPPGFX-RQGETPMVCRXNKSLYGLKQASRSWFXKFSA 705
Query: 3168 ALLSLGYSQSKNDYSLY 3218
+ G+ QS+ DYSL+
Sbjct: 706 TIQQDGFXQSRADYSLF 722
Score = 126 bits (317), Expect = 1e-25
Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 9/296 (3%)
Frame = +2
Query: 3365 IKDLGYLYYFLGFEVM-VTDTELSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXX 3541
IKDLG L YFLG EV TD E + K + + ++ P
Sbjct: 763 IKDLGQLRYFLGIEVARSTDDEAGLLGAKPLLTPMEENNKLLP----------------- 805
Query: 3542 XXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELC 3721
G LL N YR +VG+L +LT TR ++ +S+ +LSQFMQ PR+ HL A+ L
Sbjct: 806 --TVGDLLKNPSIYRRLVGQLIYLTITRPEISYSIHILSQFMQEPRKPHLHAVHHLLRYL 863
Query: 3722 SQHSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGH------TWRLSH*--LEK 3877
+ + ++ + C +W+ + +
Sbjct: 864 KGALGQGLYFPAKGNLLLRGFCDADWARCSITRRSVTGYCIFLGEALISWKTKKQTTVSR 923
Query: 3878 *EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHI 4057
E+ ++AMA T ++TW+ LLD L V + P L CD +A+HIA N ++H+ TKHI
Sbjct: 924 SSAESEYQAMASITCELTWLKYLLDDLKVEHSQPAKLFCDSKAALHIAANPVYHERTKHI 983
Query: 4058 EIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLGVLPSTHPP 4225
EIDCH +++ G + A P++ Q D+ TK L LL K G L H P
Sbjct: 984 EIDCHVVRERIQSGXIVTAHXPSSCQLADLFTKPLNSSIFHSLLXKFGXL-DIHAP 1038
>KHN06274.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Glycine soja]
Length = 1353
Score = 302 bits (773), Expect(3) = e-128
Identities = 182/549 (33%), Positives = 282/549 (51%), Gaps = 26/549 (4%)
Frame = +1
Query: 1423 HNILDHLPLDRLSHIHNLPVPSMKSLGYI-CQICPKARQYRQSFSSSTTKTNAPFDLIHI 1599
H+ L H L +L + +PS+K+L + C+ C + R SF + + N+ F +IH
Sbjct: 433 HDRLGHPSLPKLK----MMIPSLKNLRVLECEPCQLGKHVRSSFPKTVQRCNSAFSIIHS 488
Query: 1600 DTWGSYHTKTYNGYSYFLTIVDD*TRLTWTHLLVVKSNAFPILEAFIAYVTTQFNTTIKV 1779
D WG ++ G+ YF+T +D+ +R TW +L+ +S PI +F+ + QF TTI+V
Sbjct: 489 DIWGPSRVSSF-GFRYFVTFIDEFSRCTWVYLMKDRSELLPIFMSFLNEIENQFKTTIQV 547
Query: 1780 IRSDNAPEFSGKTTLEFYASKGISLQSSCTHTPQQNGVVERKHKHLLETSRALLFQSNAP 1959
RSDNA E+ +SKGI QS+C HTPQQNG+ ERK++HLL+ +R+L+ S+ P
Sbjct: 548 FRSDNAKEYFSHDFSSLLSSKGILHQSTCPHTPQQNGIAERKNRHLLDIARSLMLASHVP 607
Query: 1960 TQFWGECLLTATYLVNMFPLPSLNHTSPFQMLFQVAPSYSHL-----RNFGCLCYAAIDK 2124
T WG+ +LTA +L+N P SL + P ++F + HL + FGC C+
Sbjct: 608 THHWGDAVLTACFLINRMPSSSLENQIPHSIIFP----HDHLFHVPPKVFGCTCFVHNLS 663
Query: 2125 PARTKFDRISRTCVFIGYPFGKKAYKIYDLTTQTVFTSRDVIFHEN--WYPI---HSAQ- 2286
P K + CVF+GY +K YK + +T+ + S DV F E+ +YP HS+
Sbjct: 664 PGLDKLSARAIKCVFLGYSRLQKGYKCFSPSTRRYYMSADVTFFEDTPFYPSSTDHSSSI 723
Query: 2287 ---LPIPSTLP---------EIPNDIPYHIYYPMVAHSEAL--DHSNISPGLSHDIPDTT 2424
LPIPS P E+P+ P+ P S L + I P + +P+ +
Sbjct: 724 QNVLPIPSPCPLDTSNPDVSEVPSSPPH----PTEVASPPLLTNQCRIQP-VGPSVPEAS 778
Query: 2425 HTNTNIMQTSTPSTHISYNHTTSCDSLLHSFVPNAPHTLTHVVRKSTRLKTTPMYLKDYV 2604
++ + + + +H + D + V+RK TR P + +++
Sbjct: 779 PHDSPPFSINPQAVDPATSHPSDSDWPI-------------VIRKGTRSSRNPHPIYNFL 825
Query: 2605 CQIDTXXXXXXXXXXXXXXXXVLHFFESKSYKQASKNPKWIDSINNEINVLSTNDTWELV 2784
HF S + +A +P W ++ +E+ L N TWELV
Sbjct: 826 -----NYHRLSPLYSSFVFSLSSHFVPSNIH-EALSHPGWRQAMIDEMQALENNGTWELV 879
Query: 2785 PLPPGKKAISCKWIYKIKLKSDGSVKRFKARLVVKGFRQKYGIDYLETFSPVVKMSTIRC 2964
PLPPGKK + C+W+Y +K+ +G + R KARLV KG+ Q YG+DY +TFSPV K++T+R
Sbjct: 880 PLPPGKKTVGCRWVYAVKVGPNGEIDRLKARLVAKGYTQIYGLDYCDTFSPVAKITTVRL 939
Query: 2965 ILAIVVANH 2991
LA+ H
Sbjct: 940 FLAMAAMRH 948
Score = 123 bits (308), Expect(3) = e-128
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Frame = +2
Query: 3368 KDLGYLYYFLGFEVMVTDTE--LSMTQCKFVQELLSDSGLTFPIRKSKAYVXXXXXXXXX 3541
KDLGYL YFLG EV + + ++Q K+ ++L ++G+ + +
Sbjct: 1069 KDLGYLKYFLGIEVAQSGDGDGIVISQRKYALDILEETGM----QNCRPVDSPMDLNLKL 1124
Query: 3542 XXNDGQLLANA*YYRSMVGKLNFLTNTRHDLCFSVQMLSQFMQHPREFHLQALKASLELC 3721
+ ++ + YR +VGKL +LT TR D+ F V ++SQFMQ+PR H A+ L
Sbjct: 1125 LADQSEMYFDPKRYRRLVGKLIYLTITRPDISFVVGVVSQFMQNPRVDHWNAVMRILRYI 1184
Query: 3722 SQ--------HSNSRHHLKGVKSAVIASIFXXXXXXXXXNQEIYHRVCGHTWRLSH*LEK 3877
+ + G A A I V + + +
Sbjct: 1185 KRAPGQGLLYEDKGNTQVSGYCDADWAGCPMDRRSTSGYCVSIGGNVISWKSKKQTVVAR 1244
Query: 3878 *EVENRFRAMAKATSDVTWMVRLLDHLGVINLLPVTLHCDKNSAMHIARNLIFHKCTKHI 4057
E +R+MA T ++ W+ ++L+ L ++ + L+CD +A+HI N +FH+ TKHI
Sbjct: 1245 SSAEAEYRSMAITTCELMWVKQILEELKFCKVMQMKLYCDNQAALHIVSNPVFHERTKHI 1304
Query: 4058 EIDCHFT*KKVIEGLLTLARIPTTGQTTDVLTKVLPYPQHSYLLSKLG 4201
+IDCHF KK++ + I + Q D+LTK L P+ ++ SKLG
Sbjct: 1305 KIDCHFIWKKLLSKEIVTEFINSNDQPADILTKSLRGPRIQFICSKLG 1352
Score = 89.0 bits (219), Expect(3) = e-128
Identities = 50/114 (43%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Frame = +3
Query: 2994 PLYKLDINNAFLHGDLHEEVYMQPPEGIPIPEGQ---VCRLRKSLYGLKQVFRQWFAKLS 3164
PL++LDI NAFLHGDL EE+YM+ P G + +G+ VC+LR+SLYGLKQ R WF K S
Sbjct: 950 PLHQLDIKNAFLHGDLEEEIYMEQPPGF-VAQGEYGLVCKLRRSLYGLKQSPRAWFGKFS 1008
Query: 3165 TALLSLGYSQSKNDYSL-YCLQND*GTXXXXXXXXXXXXTGSNQDDITQLKAHL 3323
+ G +S+ D+S+ YC + TG++ I QLK HL
Sbjct: 1009 HIVQLFGLKRSEADHSVFYCHSSPRKCVCLIVYVDDIVITGNDASKINQLKEHL 1062