BLASTX nr result
ID: Lithospermum23_contig00002150
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00002150
(6172 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2878 0.0
XP_016560439.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2863 0.0
XP_019228036.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2855 0.0
XP_016440712.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2853 0.0
XP_009594602.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2853 0.0
XP_012831470.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2851 0.0
XP_004232527.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2851 0.0
XP_016502102.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2849 0.0
XP_009776334.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2849 0.0
XP_006340787.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2848 0.0
XP_019182613.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2845 0.0
XP_011073958.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 2836 0.0
XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2830 0.0
XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2821 0.0
XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2818 0.0
XP_008448514.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 2796 0.0
XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2796 0.0
XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2795 0.0
XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2794 0.0
XP_010029631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2794 0.0
>XP_011099129.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2878 bits (7462), Expect = 0.0
Identities = 1423/1538 (92%), Positives = 1481/1538 (96%), Gaps = 1/1538 (0%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAK+R+VQFGILSPDEIRQMSVVHIEH ETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVL+ILRCVCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA+RIRNPKN+LKK+ DACKNK+KCEGGDEID+Q QDT+EP+KKTRGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYK+ KKKNDD EQ+PEPVERKQQLSAE+VLSILKR++DEDC LGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH +SE GFITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADAATMEKINETIS AKN+VK+LIR QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
LESLKLKK DF Y+YEID+ W P+YM EAVEDLKTIREIRSVFDAEV KLEADR Q
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+NSWPLPVNI+RL+ NAQKTFK+D RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
P+V KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFV SYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSK+ KFDE+EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYME-GGLEFGMTPGRSPISG 4719
LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEI LPSYME GGLEFGMTP RSP++G
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 4720 TPYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
TPYHDGMMSP+YLLSPN LR+SP++DAQFSPYVGGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPN-LRLSPVTDAQFSPYVGGMAF 1537
>XP_016560439.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Capsicum annuum]
Length = 1846
Score = 2863 bits (7422), Expect = 0.0
Identities = 1422/1537 (92%), Positives = 1474/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEEDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+L+K+ DACKNKTKCEGGDEID+QSQDTEEP++K+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQSQDTEEPVRKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYK+ KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G+ITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK FE Y YEIDD W P YM EAVEDLK IREIRSVFDAEV KLEADR Q
Sbjct: 901 LDSLKAKKSTFEDMYAYEIDDPNWNPSYMLLEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVVGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
L+GVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LKGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSPM+DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPMTDAQFSPYVGGMAF 1535
>XP_019228036.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
attenuata] OIT31005.1 dna-directed rna polymerase ii
subunit 1 [Nicotiana attenuata]
Length = 1853
Score = 2855 bits (7400), Expect = 0.0
Identities = 1419/1537 (92%), Positives = 1472/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+LKK+ DACKNKTKCEGGDEID++ ++ E P+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G ITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADA+TMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EA+EDLKTIREIRSVFDAEV KL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSP++DAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPITDAQFSPYVDKMAF 1535
>XP_016440712.1 PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Nicotiana tabacum]
Length = 1630
Score = 2853 bits (7395), Expect = 0.0
Identities = 1418/1537 (92%), Positives = 1473/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+LKK+ DACKNKTKCEGGDEID++ ++ E P+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G ITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADA+TMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EA+EDLKTIREIRSVFDAEV KL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSP++DAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPITDAQFSPYVDKMAF 1535
>XP_009594602.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2853 bits (7395), Expect = 0.0
Identities = 1418/1537 (92%), Positives = 1473/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+LKK+ DACKNKTKCEGGDEID++ ++ E P+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G ITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADA+TMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EA+EDLKTIREIRSVFDAEV KL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSP++DAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPITDAQFSPYVDKMAF 1535
>XP_012831470.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttata] EYU42342.1 hypothetical protein
MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2851 bits (7391), Expect = 0.0
Identities = 1407/1537 (91%), Positives = 1472/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADE++PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+L+K+ DACKNKTKC+GGDEID SQDTEEP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DDQ+Q+PEPVERKQQLSAE+VLSILKR++DEDC LGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH ++E GFITPGDTQVRIEKGELL+GTLCKKALGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FS+GIGDTIADAATMEKINETIS AKN+VK+LIR QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
EPEPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
LESLKLKK DF YKYEID+ W P+YM EAVEDLKTIREIRSVFDAEV+KLE DR Q
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+NSWPLPVNIKRL+ NAQKTFK+D RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
P+V KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFV SYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
N++APKGEL DESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSK+ KFDE++GFK
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHE+VD +RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCAL LNE+MLKQAIEI LPSYMEGGLEFGMTPGRSP SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLL +LR+SP++DAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537
>XP_004232527.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum] XP_015065639.1 PREDICTED: DNA-directed RNA
polymerase II subunit 1 [Solanum pennellii]
Length = 1846
Score = 2851 bits (7390), Expect = 0.0
Identities = 1416/1537 (92%), Positives = 1469/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+L+K+ DACKNKTKCEGGDEID+Q QDTEEP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYK+ KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G+ITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AK +VK+LI+ QEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EAVEDLK IREIRSVFDAEV KLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVVGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESD+
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG C+LYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPITDAQFSPYVGGMAF 1535
>XP_016502102.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial
[Nicotiana tabacum]
Length = 1623
Score = 2849 bits (7386), Expect = 0.0
Identities = 1417/1537 (92%), Positives = 1471/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+LKK+ DACKNKTKCEGGDEID++ ++ E P+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G ITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADA+TMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EA+EDLKTIREIRSVFDAEV KL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PY DGMMSPNYLLSPN +RMSP++DAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPN-MRMSPITDAQFSPYVDKMAF 1535
>XP_009776334.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2849 bits (7386), Expect = 0.0
Identities = 1417/1537 (92%), Positives = 1471/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+LKK+ DACKNKTKCEGGDEID++ ++ E P+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G ITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADA+TMEKINETIS AK++VK+LI+ QEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EA+EDLKTIREIRSVFDAEV KL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESDY
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PY DGMMSPNYLLSPN +RMSP++DAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPN-MRMSPITDAQFSPYVDKMAF 1535
>XP_006340787.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
tuberosum]
Length = 1839
Score = 2848 bits (7383), Expect = 0.0
Identities = 1414/1537 (91%), Positives = 1468/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMK VL+ILRCVCFNCSKILADEDDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKN+L+K+ DACKNKTKCEGGDEID+Q DTEEP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYK+ KKK+DD EQ+PEPVERKQQLSAERVLSILKRVSDEDC LGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWH+DSE G+ITPGDTQVRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKINETIS AK +VK+LI+ QEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK KK F+ Y YEIDD W P YM EAVEDLK IREIRSVFDAEV KLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA TG+NSWPLPVNI+RL+ NAQKTFKID RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVVGEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEVGKTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFV SYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKVQKFD++EGFK
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AESD+
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG C+LYLNEEMLKQAIEI LPSYMEGGLEFGMTPGRSPISGT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN +RMSP++DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-MRMSPITDAQFSPYVGGMAF 1535
>XP_019182613.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ipomoea nil]
Length = 1832
Score = 2845 bits (7374), Expect = 0.0
Identities = 1410/1538 (91%), Positives = 1468/1538 (95%), Gaps = 1/1538 (0%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDQRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVL+ILRCVCFNCSKILADED+PK
Sbjct: 61 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEDEPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQAMRIRNPKNKLKK+ DACKNKTKCEGGDEI++Q QD+EEP+KK +GGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNKLKKILDACKNKTKCEGGDEINLQGQDSEEPVKKPKGGCGAQQPKISI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
DGMKMVAEYKL KKKNDD EQ+PEPVERKQQL+AE+VLSILKR+SDEDC LGLNPKYAR
Sbjct: 181 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQQLTAEKVLSILKRISDEDCQLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAM+IRHNENLK+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWHSD+E+G+ITPGDTQVRIEKGELLSGTLCKK+LGTSSG LIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHSDAETGYITPGDTQVRIEKGELLSGTLCKKSLGTSSGGLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ GFSIGIGDTIAD+ TME IN TIS AKN+VK+LI +Q+KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADSRTMENINITISDAKNKVKELIDVYQDKQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM ++FEN+VNQVLNKARD+AG+ AEKSLAESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMAETFENRVNQVLNKARDDAGTFAEKSLAESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFI RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
LESLK+KK FE YKYEIDD W P+YM +A++DL+TIREIRSVFDAEV KLE+DR Q
Sbjct: 901 LESLKVKKSTFENMYKYEIDDPNWNPNYMIPDAIDDLRTIREIRSVFDAEVQKLESDRLQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIA G+NSWPLPVNI+R++ NAQKTF+ID RR SDMHPMEIVEAVDKLQE+LKVVH
Sbjct: 961 LGTEIAVNGDNSWPLPVNIQRMVLNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVH 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDDYLS+EAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDYLSIEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLI EDVEFV SYYEMPDE+I
Sbjct: 1141 PEVAKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIPEDVEFVKSYYEMPDEDI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLRIELNREMMVDKKLSMADIAEK+NLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKVNLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKN+KVQKFD +EGFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVQKFDMNEGFKA 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIE+LGIEAVRK+LLDELR VISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEILGIEAVRKSLLDELRAVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADY 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEI LPSYM+GGLEFGMTP RSPISGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMDGGLEFGMTPARSPISGT 1500
Query: 4723 PY-HDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PY HDG+MSP +LSPN LRMSP SDAQFSPYV GMAF
Sbjct: 1501 PYHHDGLMSP--MLSPN-LRMSPSSDAQFSPYVTGMAF 1535
>XP_011073958.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1-like [Sesamum indicum]
Length = 1843
Score = 2836 bits (7353), Expect = 0.0
Identities = 1403/1541 (91%), Positives = 1467/1541 (95%), Gaps = 4/1541 (0%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPG----GLSDPR 390
MD RFPFSPAEVAKVR+VQFGI+SPDEIRQMSVVHIEHGET ERGKPK G GLSD R
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60
Query: 391 LGTIDRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADE 570
LGTI +K+KCETCM+NMAECPGHFGHLELAKPMFHIGFMK VL+ILR VCFNCSKILADE
Sbjct: 61 LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120
Query: 571 DDPKMKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQP 750
DDPK KQAMRIRNPKN+L+K+ DACKNK+KC+GGDEID++ Q+ +EP+KK+RGGCGAQQP
Sbjct: 121 DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180
Query: 751 KISIDGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNP 930
KISIDGMKMVAEYK+ KKKNDDQ+Q+PEPVERKQ LSAE+VLSILKR++DEDC LGLNP
Sbjct: 181 KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240
Query: 931 KYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPA 1110
KYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK QERNGAPA
Sbjct: 241 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300
Query: 1111 HIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 1290
HIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360
Query: 1291 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAK 1470
FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420
Query: 1471 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 1650
YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480
Query: 1651 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGI 1830
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQSNRPVMGI
Sbjct: 481 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540
Query: 1831 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIP 2010
VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P P ILKPRPLWTGKQVFNLIIP
Sbjct: 541 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600
Query: 2011 KQINLLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVG 2190
KQINLLR SAWH ++E G+ITPGDTQVRIEKG+LLSGTLCKKALGTS+GSLIHVIWEEVG
Sbjct: 601 KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660
Query: 2191 PDAARKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQ 2370
PDAARKFLGHTQWLVNYWLLQ+ FS+GIGDTIADAATMEKINETIS AKNQVK+LIR Q
Sbjct: 661 PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720
Query: 2371 EKQLEPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINI 2550
EKQLE EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINI
Sbjct: 721 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780
Query: 2551 SQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAM 2730
SQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840
Query: 2731 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 2910
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI
Sbjct: 841 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900
Query: 2911 ESQPLESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEA 3090
ESQPLESLKLKK DF YKYEID W P YM EAVEDLKTIREIRSVFDAEV KLEA
Sbjct: 901 ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960
Query: 3091 DRSQLGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKL 3270
DR QLG EIATTG+NSWPLPVNIKRL+ NAQKTFK+D RR SDMHPMEIVEAVDKLQE+L
Sbjct: 961 DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020
Query: 3271 KVVHGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSL 3450
KVV GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWV+GEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080
Query: 3451 VAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 3630
VA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140
Query: 3631 VYLKPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMP 3810
VYL+P+V KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFV SYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200
Query: 3811 DEEIDPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILR 3990
DEEIDP+KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260
Query: 3991 IRIMNDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHE 4170
IRIMNDEAPKGELQDESAEDDVFLKK+E NMLTEMALRGIPDINKVFIKN KV KFDE+E
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320
Query: 4171 GFKTETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 4350
GFK E EWMLDTEGVNLLAV CHEDVD++RTTSNHLIEVIEVLGIEAVRKALLDELRVVI
Sbjct: 1321 GFKAENEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1380
Query: 4351 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYA 4530
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+A
Sbjct: 1381 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1440
Query: 4531 ESDYLRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSP 4710
E D LRGVTENIMLGQLAPIGTGDC L LNEEMLKQAIEI LPSYMEGGLEFGMTPGRSP
Sbjct: 1441 EMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP 1500
Query: 4711 ISGTPYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
++GTPYHDGMMSP+YLLSPN LR+SP+SDAQFSPYVGGMAF
Sbjct: 1501 VTGTPYHDGMMSPSYLLSPN-LRLSPVSDAQFSPYVGGMAF 1540
>XP_002285900.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2830 bits (7337), Expect = 0.0
Identities = 1390/1537 (90%), Positives = 1470/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ETTERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA +IRNPKN+LKK+ DACKNK+KCEGGDEI+ Q+ D++EP+KK+RGGCGAQQPK++I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM+AEYK+ +KKNDD EQLPEPVERKQQLSAERVL++LKR+SDEDC LGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIP PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLR SAWHS+SE+GFITPGDTQVRIEKGELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+GFSIGIGDTIADAATMEKINETIS AKN+VK+LIR QE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK+KK +F+R +KYEIDD+ W P YM E VEDLKTIRE R+VFDAEV KLEADR Q
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+NSWP+PVN+KRLIWNAQKTFK+D RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
P+V KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FV SYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
P KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGELQDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ KV KFDE EGFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCALYLN++ML+ AIE+ LPSYME GL+FGMTP RSPI+GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNYLLSPN LR+SP++DAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPN-LRLSPITDAQFSPYVGGMAF 1535
>XP_017252141.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2821 bits (7312), Expect = 0.0
Identities = 1380/1537 (89%), Positives = 1465/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEHGETTERGKPKP GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL+I+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA +IRNPKN+LKK+ D+CK+KTKCEGGDEI+ QSQDT+EP+KK+RGGCGAQQPKI+I
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM+AEYK+ KKKNDD EQLPEPVERKQQLSAERVL++LKR+SDEDC LGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL+KQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
L+R SAWH+D E+G ITPGDTQVRIEKGE+++GTLCKK LG S+GSLIHVIWEEVGPDAA
Sbjct: 601 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATMEKINETIS AKN VK+LIR Q+K L
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
EPEPGRTM +SFENKVNQVLNKARD+AGSSAEKSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK+KK++F++ ++YEIDD W P YM + VEDLKTIRE R+VFDAEV KLEADR Q
Sbjct: 901 LDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EI TTG+N+WP+PVN+KRLIWNAQKTFK+D RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
P V +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+I+EDV+FV SYYEMPDEEI
Sbjct: 1141 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
DP+KISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGELQDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK K +FDE+ GF T
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAV+CHE+VDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDC+LYLNE+MLKQAI+I LPSYM+ GL+FGMTP RSPISGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYHDGMMSPNY+LSPN LR+SP++DAQFSPYVGGM F
Sbjct: 1500 PYHDGMMSPNYMLSPN-LRLSPITDAQFSPYVGGMGF 1535
>XP_010266907.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2818 bits (7306), Expect = 0.0
Identities = 1389/1537 (90%), Positives = 1465/1537 (95%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MDTRFP+SPAEV+KVR VQFGILSPD IRQMSVV IEH ETTE+GKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA RIRNPKN+LKKV DACKNKTKCEGGDEI++Q QDT EPIKK RGGCGAQQPK++I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM+AEYK +KKNDDQEQLPEPVERKQQLSAERVLS+LKR+SDEDC LGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
+DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIP PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
L+R SAWHS+SE+GFITPGDTQVRIE+GELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+GFSIGIGDTIADAATMEKINETIS AKN+VK+LIR QE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
E EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK++K +F++ ++YEIDD+ W P YM E VEDLKTIRE R+VFDAEV KLEADR Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+N+WP+PVN+KRLIWNAQKTFK+D RR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEV KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FV SYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
P KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGELQDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ KV KFDE EGFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCALYLN++ML+QAIE+ LPSYME GL+FGMTP RSPI GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PY++GMMSP+YLLSPN R+SP++DAQFSPYVGGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPN-ARLSPITDAQFSPYVGGMAF 1535
>XP_008448514.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit 1 [Cucumis melo]
Length = 1838
Score = 2796 bits (7249), Expect = 0.0
Identities = 1379/1537 (89%), Positives = 1459/1537 (94%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHGETTERGKPK GLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLTI+R VCFNCSKIL DE+DPK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA+RI+NPKN+L+K+ DACKNKTKCEGGDEID+Q QD+++P+KK+RGGCGAQQPKI+I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKITI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM AEYK +KKNDDQEQLPEPVERKQ L+AERVL ILKR++D+DC LGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGILKRITDDDCKLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKIP PAILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
L R SAWHS+SE+G +TPGDT VRIEKGELLSGTLCKKALGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHVTPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+ FSIGIGDTIADAATMEKINETIS AKN+VK+LI++ QE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
EPEPGRTM DSFENKVNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK+KK +FER ++YE +D+ W+P+YM E VEDLKTIRE R+VF+AEV KLEADR Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTGENSWP+PVN+KRLI NAQKTFKID RRASDMHPMEIVEA+DKLQE+LKVV
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
G+D LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PE KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMST+IEED++FV SYYEMPDEEI
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
P KISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK KV KFDE+EGFK
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D+
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTG CALYLN+EMLK AIE+ LPSY++ GL+FGMTP RSPISGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGGCALYLNDEMLKNAIELQLPSYID-GLDFGMTPSRSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYH+GMMSPNYLLSPN LR+SP+SDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPNYLLSPN-LRLSPISDAQFSPYVGGMAF 1535
>XP_008806151.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Phoenix
dactylifera]
Length = 1842
Score = 2796 bits (7248), Expect = 0.0
Identities = 1377/1538 (89%), Positives = 1460/1538 (94%), Gaps = 1/1538 (0%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEHGET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHGETMERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL I+RCVCFNCSKILADEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDTR 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQ-DTEEPIKKTRGGCGAQQPKIS 759
KQA++IRNPK++LK++YDACK K KC GGD+ID+Q+Q D+EEPIKK+RGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 760 IDGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYA 939
IDGMKM+AEYK KKK+DDQEQLPEPVERKQ LSAERVLS+LKR+SDEDC LGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLDPKYA 240
Query: 940 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHII 1119
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1120 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1299
+EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1300 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1479
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1480 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1659
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1660 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1839
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1840 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQI 2019
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIP PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 2020 NLLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDA 2199
NL+R SAWHS++E+GFITPGDT VRIEKGELLSGTLCK+ LGTS+GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKRTLGTSTGSLIHVIWEEVGPDA 660
Query: 2200 ARKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQ 2379
ARKFLGHTQWLVNYWLLQ+GFSIGIGDTIADAATMEKINETIS AKN VK+LI+ QEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2380 LEPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQM 2559
LE EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2560 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGR 2739
TACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2740 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2919
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2920 PLESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRS 3099
L+SLK+KK +F++ +KYEIDD W P YM E VEDLKTIRE R+VFDAEV KLEADR
Sbjct: 901 KLDSLKMKKSEFDKGFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3100 QLGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVV 3279
QLG EIATTG+N+WPLPVN+KRLIWNAQKTFKID RR SDMHPMEIVEA+DKLQE+LKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3280 HGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAP 3459
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3460 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3639
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3640 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEE 3819
KPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMST+IEEDVEFV SYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3820 IDPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 3999
I P KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 4000 MNDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFK 4179
MNDEAPKGELQDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ KV +FD++EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDDNEGFK 1320
Query: 4180 TETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4359
+ EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4360 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 4539
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETD 1440
Query: 4540 YLRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISG 4719
YLRGVTENIMLGQLAPIGTGDCALYLN++ML+QAIE+ LPSYME GL+FGMTP RSPISG
Sbjct: 1441 YLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPISG 1499
Query: 4720 TPYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
TPYH+GMMSP+YLLSPN +R SP++DAQFSPYVGGMAF
Sbjct: 1500 TPYHEGMMSPSYLLSPN-VRSSPITDAQFSPYVGGMAF 1536
>XP_010935180.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Elaeis
guineensis]
Length = 1842
Score = 2795 bits (7245), Expect = 0.0
Identities = 1378/1538 (89%), Positives = 1458/1538 (94%), Gaps = 1/1538 (0%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR VQFGILSPDEIRQMSVV IEH ET ERGKPKPGGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMERGKPKPGGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGF+KTVL I+RCVCFNCSKILADEDD +
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLAIMRCVCFNCSKILADEDDAR 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQ-DTEEPIKKTRGGCGAQQPKIS 759
KQA++IRNPK++LK++YDACK K KC GGD+ID+Q+Q D+EEPIKK+RGGCGAQQP I+
Sbjct: 121 FKQALKIRNPKHRLKRIYDACKTKKKCAGGDDIDVQAQQDSEEPIKKSRGGCGAQQPNIT 180
Query: 760 IDGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYA 939
IDGMKM+AEYK KKK+DDQEQLPEPVERKQ LSAERVLS+LKR+SDEDC LGL+PKYA
Sbjct: 181 IDGMKMIAEYKAPKKKSDDQEQLPEPVERKQVLSAERVLSVLKRISDEDCLLLGLSPKYA 240
Query: 940 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHII 1119
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHII
Sbjct: 241 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 300
Query: 1120 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1299
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 301 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 360
Query: 1300 RTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 1479
RTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII
Sbjct: 361 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 420
Query: 1480 RDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1659
R+DGQRLDLRYLKKSSD HLELGYKVERHL DGD+VLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 421 REDGQRLDLRYLKKSSDHHLELGYKVERHLMDGDYVLFNRQPSLHKMSIMGHRIKIMPYS 480
Query: 1660 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1839
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 481 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 540
Query: 1840 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQI 2019
TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIP PAILKPRPLWTGKQVFNLIIPKQI
Sbjct: 541 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQI 600
Query: 2020 NLLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDA 2199
NL+R SAWHS++E+GFITPGDT VRIEKGELLSGTLCKK LGTS+GSLIHVIWEEVGPDA
Sbjct: 601 NLIRTSAWHSEAETGFITPGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDA 660
Query: 2200 ARKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQ 2379
ARKFLGHTQWLVNYWLLQ+GFSIGIGDTIADAATMEKINETIS AKN VK+LI+ QEKQ
Sbjct: 661 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNDVKELIKLAQEKQ 720
Query: 2380 LEPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQM 2559
LE EPGRTM +SFEN+VNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQM
Sbjct: 721 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 780
Query: 2560 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGR 2739
TACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 781 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 840
Query: 2740 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2919
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 900
Query: 2920 PLESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRS 3099
L+SLK+KK DF+R +KYEIDD W P YM E VEDLKTIRE R+VFDAEV KLEADR
Sbjct: 901 KLDSLKMKKSDFDRVFKYEIDDDNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRY 960
Query: 3100 QLGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVV 3279
QLG EIATTG+N+WPLPVN+KRLIWNAQKTFKID RR SDMHPMEIVEA+DKLQE+LKVV
Sbjct: 961 QLGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDMHPMEIVEAIDKLQERLKVV 1020
Query: 3280 HGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAP 3459
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WV+GEIESRFLQSLVAP
Sbjct: 1021 PGDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAP 1080
Query: 3460 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3639
GEMIGC+AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3640 KPEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEE 3819
KPEV K KE AKNVQCALEYTTLRSVT ATE+WYDPDPMST+IEEDVEFV SYYEMPDE+
Sbjct: 1141 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPMSTIIEEDVEFVKSYYEMPDED 1200
Query: 3820 IDPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 3999
I P KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNA+KLILRIRI
Sbjct: 1201 IAPEKISPWLLRIELNREMMVDKKLSMADIAEKINHEFADDLTCIFNDDNADKLILRIRI 1260
Query: 4000 MNDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFK 4179
MNDEAPKGELQDESAEDDVFLK+IE NMLTEMALRGIPDINKVFIK+ KV +FDE+EGFK
Sbjct: 1261 MNDEAPKGELQDESAEDDVFLKRIESNMLTEMALRGIPDINKVFIKSGKVNRFDENEGFK 1320
Query: 4180 TETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFD 4359
+ EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFD
Sbjct: 1321 ADVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4360 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD 4539
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD 1440
Query: 4540 YLRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISG 4719
+LRGVTENIMLGQLAPIGTGDCALYLN++ML+QAIE+ LPSYME GLEFGMTP RSPISG
Sbjct: 1441 HLRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLEFGMTPSRSPISG 1499
Query: 4720 TPYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
TPYH+GMMSP+YLLSPN +R SP++DAQFSPYVGGM F
Sbjct: 1500 TPYHEGMMSPSYLLSPN-VRSSPITDAQFSPYVGGMTF 1536
>XP_018807320.1 PREDICTED: DNA-directed RNA polymerase II subunit 1, partial [Juglans
regia]
Length = 1671
Score = 2794 bits (7243), Expect = 0.0
Identities = 1368/1537 (89%), Positives = 1459/1537 (94%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEH ET ERGKPK GLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETMERGKPKIAGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVL+I+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA++I+NPKN+LKK+ DACKNKTKCEGGDE+++Q QD+EEP+KK+RGGCGAQQPK++I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDELEVQGQDSEEPVKKSRGGCGAQQPKLTI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM+AEYK +KK+DDQEQLPEPVERKQ L+AERVL++LKR+SDEDC LGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLNVLKRISDEDCQLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+KQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDT I KDVFMNILMWWEDFDGKIP PAILKP P WTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTLISKDVFMNILMWWEDFDGKIPAPAILKPGPYWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
L R SAWH +SE+GFITPGDTQVRIE+GELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHLESETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGH QWLVNYWLLQ+GFSIGIGDTIADAATME INETIS AKN+VK+LIR+ Q ++L
Sbjct: 661 RKFLGHVQWLVNYWLLQNGFSIGIGDTIADAATMETINETISKAKNEVKELIRKAQAREL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
EPEPGRTM DSFENKVNQ LN+ARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQTLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIP+GFIDRTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQR 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK+KK +FER ++YE DD++W PDYM E +EDLKTIRE R+VFDAEV KLEADR Q
Sbjct: 901 LDSLKMKKTEFERVFRYEFDDEQWNPDYMMQEHIEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+NSWPLPVN+KRLIWNAQK FKIDPRR SDMHPMEIVEAVDKLQE+LKVV
Sbjct: 961 LGAEIATTGDNSWPLPVNLKRLIWNAQKIFKIDPRRHSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
G+D LS+EAQKNATLFF+ILLRS ASKRVL+EY+LTREAF+WV+GEIESRFLQSLVAPG
Sbjct: 1021 GEDLLSVEAQKNATLFFSILLRSTFASKRVLEEYKLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEV +TKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FV SYYEMPDEE+
Sbjct: 1141 PEVCRTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVRSYYEMPDEEV 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
P KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDEAPKGELQDESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK K+ KFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQCKINKFDENDGFKP 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
E EWMLDTEGVNLLAVMCHEDVD++RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAE+DY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCALYLN+EMLK AIE+ LPSYM+ GL+FGMTP SP+SGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMD-GLDFGMTPSHSPVSGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYH+G+MSP+YLLSPN LR+SP++DAQFSPYVGGMAF
Sbjct: 1500 PYHEGLMSPSYLLSPN-LRLSPITDAQFSPYVGGMAF 1535
>XP_010029631.1 PREDICTED: DNA-directed RNA polymerase II subunit 1 [Eucalyptus
grandis] KCW56573.1 hypothetical protein EUGRSUZ_I02304
[Eucalyptus grandis]
Length = 1852
Score = 2794 bits (7243), Expect = 0.0
Identities = 1374/1537 (89%), Positives = 1454/1537 (94%)
Frame = +1
Query: 223 MDTRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 402
MD RFPFSPAEVAKVRLVQFGILSPDEIRQMSVV IEHGETTERGKPK GLSDPRLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVQIEHGETTERGKPKIAGLSDPRLGTI 60
Query: 403 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLTILRCVCFNCSKILADEDDPK 582
DRKLKCETC ANMAECPGHFGHLELAKPMFHIGF+KTVL+I+RCVCFNCSKIL DEDD K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILTDEDDHK 120
Query: 583 MKQAMRIRNPKNKLKKVYDACKNKTKCEGGDEIDMQSQDTEEPIKKTRGGCGAQQPKISI 762
KQA+RIRNPKN+LKK+ DACKNK+KC+GGD++D + Q +EEP KK GGCGAQQPK++I
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCDGGDDVDTKGQGSEEPKKKNHGGCGAQQPKLTI 180
Query: 763 DGMKMVAEYKLTKKKNDDQEQLPEPVERKQQLSAERVLSILKRVSDEDCHSLGLNPKYAR 942
+GMKM+AEYK +KKNDDQ+Q+PEPVERKQ LSAERVLS+LKR+SDE C LGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQDQIPEPVERKQTLSAERVLSVLKRISDEHCQLLGLNPKYAR 240
Query: 943 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKKQERNGAPAHIIS 1122
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 1123 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1302
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1303 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 1482
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1483 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1662
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1663 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1842
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1843 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPQPAILKPRPLWTGKQVFNLIIPKQIN 2022
LLGCRKITKRDTFIEKDVFMN+LMWWEDFDGK+P PAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNVLMWWEDFDGKVPTPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2023 LLRNSAWHSDSESGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 2202
LLRNSAWHS++E+GFITPGDTQVRIEKGELLSGTLCKKALGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2203 RKFLGHTQWLVNYWLLQHGFSIGIGDTIADAATMEKINETISGAKNQVKDLIRQFQEKQL 2382
RKFLGHTQWLVNYWLLQ+GFSIGIGDTIADAATMEKINETIS AK++VK LI+ QEK+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISSAKDEVKRLIKDAQEKKL 720
Query: 2383 EPEPGRTMNDSFENKVNQVLNKARDEAGSSAEKSLAESNNLKAMVTAGSKGSFINISQMT 2562
EPEPGRTM +SFENKVNQVLNKARD+AGSSA+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2563 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDLGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2742
ACVGQQNVEGKRIPFGFI RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2743 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 2922
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2923 LESLKLKKDDFERKYKYEIDDQRWRPDYMSSEAVEDLKTIREIRSVFDAEVSKLEADRSQ 3102
L+SLK+KK +F+R ++YEIDD+ W PDYM E EDL++I E+R VFDAEV KLEADR Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEIDDENWNPDYMLPENAEDLRSIGELRDVFDAEVQKLEADRYQ 960
Query: 3103 LGKEIATTGENSWPLPVNIKRLIWNAQKTFKIDPRRASDMHPMEIVEAVDKLQEKLKVVH 3282
LG EIATTG+N+WPLPVN+KRLIWNAQKTFKID RR SD+HP+E+VEA+DKLQE+LKVV
Sbjct: 961 LGTEIATTGDNTWPLPVNLKRLIWNAQKTFKIDLRRPSDIHPVEVVEAIDKLQERLKVVP 1020
Query: 3283 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVVGEIESRFLQSLVAPG 3462
G+D LS+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFDWV+GEIESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3463 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3642
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3643 PEVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVSSYYEMPDEEI 3822
PEV KTKE AK VQCALEYTTLRSVTQATEVWYDPDP ST IEED++FV SY EMPDEEI
Sbjct: 1141 PEVSKTKENAKTVQCALEYTTLRSVTQATEVWYDPDPTSTRIEEDIDFVKSYIEMPDEEI 1200
Query: 3823 DPNKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 4002
P KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 4003 NDEAPKGELQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKVQKFDEHEGFKT 4182
NDE PKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKN KV KF+E++GFK
Sbjct: 1261 NDEVPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFNENDGFKP 1320
Query: 4183 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4362
ETEWMLDTEGVNLLAVMCHE VDA RTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDATRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4363 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 4542
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAVYAESDY
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 4543 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEISLPSYMEGGLEFGMTPGRSPISGT 4722
LRGVTENIMLGQLAPIGTGDCALYLN+EMLK AIE+ LPSYM+ GL+FGMTP RSPISGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 4723 PYHDGMMSPNYLLSPNHLRMSPMSDAQFSPYVGGMAF 4833
PYH+GMMSP+YLLSPN LR+SP +DAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPN-LRLSPTTDAQFSPYVGGMAF 1535