BLASTX nr result
ID: Lithospermum23_contig00001201
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum23_contig00001201
(1917 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVI03114.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 172 6e-46
XP_019185424.1 PREDICTED: THO complex subunit 4D [Ipomoea nil] 170 1e-44
CDP01629.1 unnamed protein product [Coffea canephora] 169 1e-44
XP_011097442.1 PREDICTED: THO complex subunit 4D isoform X5 [Ses... 166 7e-44
XP_011097440.1 PREDICTED: THO complex subunit 4D isoform X3 [Ses... 166 2e-43
XP_016572542.1 PREDICTED: THO complex subunit 4D isoform X2 [Cap... 162 9e-43
XP_015582551.1 PREDICTED: THO complex subunit 4C isoform X3 [Ric... 161 2e-42
XP_016572541.1 PREDICTED: THO complex subunit 4D isoform X1 [Cap... 163 4e-42
XP_002276497.1 PREDICTED: THO complex subunit 4D [Vitis vinifera... 162 5e-42
EOY14345.1 RNA-binding family protein, putative isoform 2, parti... 160 1e-41
XP_002531919.1 PREDICTED: THO complex subunit 4D isoform X2 [Ric... 161 1e-41
XP_012845095.1 PREDICTED: THO complex subunit 4D [Erythranthe gu... 162 1e-41
XP_015582550.1 PREDICTED: THO complex subunit 4D isoform X1 [Ric... 161 1e-41
OAY60513.1 hypothetical protein MANES_01G118500 [Manihot esculenta] 160 3e-41
XP_007022819.2 PREDICTED: THO complex subunit 4D [Theobroma cacao] 160 4e-41
EOY14344.1 RNA-binding family protein, putative isoform 1 [Theob... 160 4e-41
XP_006364627.1 PREDICTED: THO complex subunit 4D [Solanum tubero... 160 5e-41
XP_004250178.1 PREDICTED: THO complex subunit 4D [Solanum lycope... 160 5e-41
OAY57175.1 hypothetical protein MANES_02G076900 [Manihot esculenta] 159 1e-40
XP_015058414.1 PREDICTED: THO complex subunit 4D [Solanum pennel... 158 3e-40
>KVI03114.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 229
Score = 172 bits (435), Expect = 6e-46
Identities = 97/207 (46%), Positives = 125/207 (60%), Gaps = 1/207 (0%)
Frame = -2
Query: 941 YWVCLYQTMCGTENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSE 762
+ VC +Q+ +N P Q ++LE+ KA G G+++GAKL VSNL GV+NEDIRELFSE
Sbjct: 23 FLVCSHQSFRRPKNLPWQRDLLEESLKAAGLPGLDNGAKLYVSNLDIGVTNEDIRELFSE 82
Query: 761 IGELVRYGIHYDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAH 582
IGEL RY IHYDK+G P G+AEV++ARRSDAFQA+N+YNN Q GKPMKIE +GS
Sbjct: 83 IGELKRYAIHYDKSGRPNGTAEVMFARRSDAFQALNRYNNVQLDGKPMKIEIVGSKSEVP 142
Query: 581 VASRLNITGGANGRRSVLKTPRPRYLRNIDILDHGAGSLEHGRTCXXXXXXXXXXXXXXX 402
++ R+N+ GG NG R+V+ P R + +G G T
Sbjct: 143 LSPRVNVVGGVNGHRTVVMMPGGGRGRGAAAFNRASGQRSRGGTVNGRGGRGRGRGGRGR 202
Query: 401 XXXXRPE-EKSAKELGKELENDQAGTT 324
+ +KSA EL KELEN A T
Sbjct: 203 GRGRKAAVDKSADELDKELENYHAMQT 229
>XP_019185424.1 PREDICTED: THO complex subunit 4D [Ipomoea nil]
Length = 271
Score = 170 bits (430), Expect = 1e-44
Identities = 100/201 (49%), Positives = 126/201 (62%), Gaps = 5/201 (2%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVG-SSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIH 732
T+N P QN + ED +A G SSG+ESG+KL VSNL GV+NEDIRELFSEIGEL+RY IH
Sbjct: 70 TKNLPWQNGLFEDSLRAAGLSSGLESGSKLYVSNLDVGVTNEDIRELFSEIGELIRYAIH 129
Query: 731 YDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGG 552
YDKNG P GSAEVV+ARR+DAFQA+ +YNN Q G+PMKIE +G+ + +R+N+ GG
Sbjct: 130 YDKNGRPSGSAEVVFARRTDAFQALKRYNNVQLDGRPMKIEIVGTNSQIPMLARVNVVGG 189
Query: 551 ANGRRSVLKT--PRPRYLRNIDILDHGA-GSLEHGR-TCXXXXXXXXXXXXXXXXXXXRP 384
NGRR+V+ P R+ + GS + GR T +P
Sbjct: 190 TNGRRTVIMNAGQGPARTRSGGVTPAANWGSGQRGRGTRGRGGRGRGRGRGRGGQGRKKP 249
Query: 383 EEKSAKELGKELENDQAGTTQ 321
EKSA +L KEL+N A Q
Sbjct: 250 VEKSADDLDKELDNYHAEAMQ 270
>CDP01629.1 unnamed protein product [Coffea canephora]
Length = 268
Score = 169 bits (429), Expect = 1e-44
Identities = 86/152 (56%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T+N P Q+ + E+ KA G SG+++G KL VSNL GV+NEDIRELFSEIGEL+RY IHY
Sbjct: 57 TKNLPWQSGLFEESLKAAGLSGLDNGTKLYVSNLDVGVTNEDIRELFSEIGELIRYAIHY 116
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DK G P GSAEV++ARRSDAFQA+ +YNN Q GKPMKIE +G+ V++R+N+ GG+
Sbjct: 117 DKTGRPSGSAEVLFARRSDAFQALKRYNNVQLDGKPMKIEIVGTNAEVPVSARVNVVGGS 176
Query: 548 NG-RRSVLKTPRPRYLRNIDILDHGAGSLEHG 456
NG RR+V+ TP P R + GAG G
Sbjct: 177 NGRRRTVVVTPGPGRTRGPTAVTRGAGQRGRG 208
>XP_011097442.1 PREDICTED: THO complex subunit 4D isoform X5 [Sesamum indicum]
Length = 235
Score = 166 bits (421), Expect = 7e-44
Identities = 86/153 (56%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T+N P QN + ED KA G SG+E+G +L +SNL GV+NEDIRELFS+IGELVRY +H+
Sbjct: 30 TKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLEVGVTNEDIRELFSDIGELVRYAVHF 89
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DK G P GSAEVV+ARRSDAFQA+ +YNN Q GKPMKIE +G+ V++R+N+ GGA
Sbjct: 90 DKTGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGANAETPVSARVNVVGGA 149
Query: 548 NGR-RSVLKTPRPRYLRNIDILDHGAGSLEHGR 453
NGR R+V+ P P R GS + GR
Sbjct: 150 NGRKRTVVIAPGPGRSRG-GFASANRGSAQRGR 181
>XP_011097440.1 PREDICTED: THO complex subunit 4D isoform X3 [Sesamum indicum]
Length = 275
Score = 166 bits (421), Expect = 2e-43
Identities = 86/153 (56%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T+N P QN + ED KA G SG+E+G +L +SNL GV+NEDIRELFS+IGELVRY +H+
Sbjct: 70 TKNLPWQNGLFEDSLKAAGLSGLETGTRLYISNLEVGVTNEDIRELFSDIGELVRYAVHF 129
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DK G P GSAEVV+ARRSDAFQA+ +YNN Q GKPMKIE +G+ V++R+N+ GGA
Sbjct: 130 DKTGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGANAETPVSARVNVVGGA 189
Query: 548 NGR-RSVLKTPRPRYLRNIDILDHGAGSLEHGR 453
NGR R+V+ P P R GS + GR
Sbjct: 190 NGRKRTVVIAPGPGRSRG-GFASANRGSAQRGR 221
>XP_016572542.1 PREDICTED: THO complex subunit 4D isoform X2 [Capsicum annuum]
Length = 211
Score = 162 bits (411), Expect = 9e-43
Identities = 101/208 (48%), Positives = 124/208 (59%), Gaps = 10/208 (4%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGV-ESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIH 732
T+N P QN + ED +A G S V ESG KL VSNL GV+NEDIRELF+EIGELVR+ IH
Sbjct: 6 TKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDTGVTNEDIRELFTEIGELVRFAIH 65
Query: 731 YDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGG 552
+DKNG P G+AEVV+ARRSDAFQA+ +YNN Q GKPMKIE +GS +A+R+N+ GG
Sbjct: 66 FDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLAARVNVVGG 125
Query: 551 ANGRRSVLKTP-RPRYLRNIDILDHGAGSLEHGR--------TCXXXXXXXXXXXXXXXX 399
N RR+V+ P P R I G GS + GR
Sbjct: 126 TNRRRTVVMAPGGPARGRGGAI---GRGSSQRGRGGLRNAPGRGRGGGRGWGRGRGRGGR 182
Query: 398 XXXRPEEKSAKELGKELENDQAGTTQIE 315
R +KSA++L KELEN A +E
Sbjct: 183 GSNRGADKSAEDLDKELENYHANADAME 210
>XP_015582551.1 PREDICTED: THO complex subunit 4C isoform X3 [Ricinus communis]
Length = 205
Score = 161 bits (408), Expect = 2e-42
Identities = 97/198 (48%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Frame = -2
Query: 902 NSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDK 723
N P Q+++LED +A G +GVE G KL VSNL GVSNEDIRELF+EIG+L RY +HYDK
Sbjct: 8 NLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELFAEIGDLKRYAVHYDK 67
Query: 722 NGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGANG 543
NG GSAEVVY RRS+AF A+ KYNN GKPMKIE +G A +++R+N+T G NG
Sbjct: 68 NGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGEAPISARVNVT-GING 126
Query: 542 R--RSVLKTPRPRYLRNIDILDHGAGSLEHG--RTCXXXXXXXXXXXXXXXXXXXRPEEK 375
R R+V+ TP P R + GAG G R +P EK
Sbjct: 127 RRKRTVVMTPGPGRGRGFAPSNRGAGQRSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEK 186
Query: 374 SAKELGKELENDQAGTTQ 321
SA EL KEL+ A Q
Sbjct: 187 SADELDKELDTYHAEAMQ 204
>XP_016572541.1 PREDICTED: THO complex subunit 4D isoform X1 [Capsicum annuum]
Length = 280
Score = 163 bits (412), Expect = 4e-42
Identities = 102/213 (47%), Positives = 126/213 (59%), Gaps = 10/213 (4%)
Frame = -2
Query: 923 QTMCGTENSPGQNNVLEDRFKAVGSSGV-ESGAKLQVSNLSDGVSNEDIRELFSEIGELV 747
+T T+N P QN + ED +A G S V ESG KL VSNL GV+NEDIRELF+EIGELV
Sbjct: 70 KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDTGVTNEDIRELFTEIGELV 129
Query: 746 RYGIHYDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRL 567
R+ IH+DKNG P G+AEVV+ARRSDAFQA+ +YNN Q GKPMKIE +GS +A+R+
Sbjct: 130 RFAIHFDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLAARV 189
Query: 566 NITGGANGRRSVLKTP-RPRYLRNIDILDHGAGSLEHGR--------TCXXXXXXXXXXX 414
N+ GG N RR+V+ P P R I G GS + GR
Sbjct: 190 NVVGGTNRRRTVVMAPGGPARGRGGAI---GRGSSQRGRGGLRNAPGRGRGGGRGWGRGR 246
Query: 413 XXXXXXXXRPEEKSAKELGKELENDQAGTTQIE 315
R +KSA++L KELEN A +E
Sbjct: 247 GRGGRGSNRGADKSAEDLDKELENYHANADAME 279
>XP_002276497.1 PREDICTED: THO complex subunit 4D [Vitis vinifera] CBI33510.3
unnamed protein product, partial [Vitis vinifera]
Length = 269
Score = 162 bits (411), Expect = 5e-42
Identities = 93/195 (47%), Positives = 119/195 (61%), Gaps = 7/195 (3%)
Frame = -2
Query: 896 PGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDKNG 717
P Q+++ ED +A G G+E+G KL +SNL GV+NEDIRELFSEIG++ RY +HY+KNG
Sbjct: 74 PWQHDLFEDSLRAAGLPGLEAGTKLYISNLDYGVTNEDIRELFSEIGDIKRYAVHYEKNG 133
Query: 716 SPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGANG-- 543
P GSAEVVY RRSDAF AV +YNN GKPMKIE +GS V++R+N+ GG NG
Sbjct: 134 RPSGSAEVVYTRRSDAFAAVKRYNNVLLDGKPMKIEIIGSDSDMPVSARVNVIGGVNGKR 193
Query: 542 RRSVLKTPRPRYLRNIDILD-----HGAGSLEHGRTCXXXXXXXXXXXXXXXXXXXRPEE 378
RR+V+ TP + R ++ G G L +GR +P E
Sbjct: 194 RRTVVMTPGVGHARGSTAINRSSSRRGRGGLSNGR----GRGRAGSRGRGRGRGRKQPVE 249
Query: 377 KSAKELGKELENDQA 333
KSA EL KEL+N A
Sbjct: 250 KSAVELDKELDNYHA 264
>EOY14345.1 RNA-binding family protein, putative isoform 2, partial [Theobroma
cacao]
Length = 219
Score = 160 bits (404), Expect = 1e-41
Identities = 96/197 (48%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T ++P Q+++ ED +A G SGVE G KL VSNL GV+NEDIRELFSEIGEL RY +HY
Sbjct: 26 TRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVTNEDIRELFSEIGELKRYAVHY 85
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DKNG P GSAEVVY RRSDAF A+ +YNN GKPMKIE +G+ +++R+N+T G
Sbjct: 86 DKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKIEIVGANAEVPISARVNVT-GI 144
Query: 548 NGR--RSVLKTPRPRYLRNIDILDHG---AGSLEHGRTCXXXXXXXXXXXXXXXXXXXRP 384
NGR R+V+ TP P R+ + G + GR+ +P
Sbjct: 145 NGRRKRAVVLTPGPGQSRSSAGPNRSLNRRGGMRSGRS--------GSRGRGRGRGKKKP 196
Query: 383 EEKSAKELGKELENDQA 333
EKSA +L KELEN A
Sbjct: 197 IEKSADDLDKELENYHA 213
>XP_002531919.1 PREDICTED: THO complex subunit 4D isoform X2 [Ricinus communis]
EEF30463.1 RNA and export factor binding protein,
putative [Ricinus communis]
Length = 268
Score = 161 bits (408), Expect = 1e-41
Identities = 97/198 (48%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Frame = -2
Query: 902 NSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDK 723
N P Q+++LED +A G +GVE G KL VSNL GVSNEDIRELF+EIG+L RY +HYDK
Sbjct: 71 NLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELFAEIGDLKRYAVHYDK 130
Query: 722 NGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGANG 543
NG GSAEVVY RRS+AF A+ KYNN GKPMKIE +G A +++R+N+T G NG
Sbjct: 131 NGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGEAPISARVNVT-GING 189
Query: 542 R--RSVLKTPRPRYLRNIDILDHGAGSLEHG--RTCXXXXXXXXXXXXXXXXXXXRPEEK 375
R R+V+ TP P R + GAG G R +P EK
Sbjct: 190 RRKRTVVMTPGPGRGRGFAPSNRGAGQRSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEK 249
Query: 374 SAKELGKELENDQAGTTQ 321
SA EL KEL+ A Q
Sbjct: 250 SADELDKELDTYHAEAMQ 267
>XP_012845095.1 PREDICTED: THO complex subunit 4D [Erythranthe guttata] EYU30902.1
hypothetical protein MIMGU_mgv1a011416mg [Erythranthe
guttata]
Length = 282
Score = 162 bits (409), Expect = 1e-41
Identities = 80/133 (60%), Positives = 101/133 (75%), Gaps = 1/133 (0%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T+N P QN + ED KA G SG+++G KL +SNL GVSNEDIRELF+EIGEL+RY IH+
Sbjct: 75 TKNLPWQNGLFEDGLKAAGLSGLDAGTKLSISNLDVGVSNEDIRELFAEIGELIRYAIHF 134
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
D+NG P GSAEVV+ARRSDAFQA+ +YNN Q GKPMKIE +G +++R+NI G A
Sbjct: 135 DRNGRPSGSAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIIGGNTEIPLSARVNIVGAA 194
Query: 548 NGR-RSVLKTPRP 513
NGR R+V+ + P
Sbjct: 195 NGRKRTVVMSSGP 207
>XP_015582550.1 PREDICTED: THO complex subunit 4D isoform X1 [Ricinus communis]
Length = 275
Score = 161 bits (408), Expect = 1e-41
Identities = 97/198 (48%), Positives = 118/198 (59%), Gaps = 4/198 (2%)
Frame = -2
Query: 902 NSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDK 723
N P Q+++LED +A G +GVE G KL VSNL GVSNEDIRELF+EIG+L RY +HYDK
Sbjct: 78 NLPWQHDLLEDSIRAAGITGVEVGTKLYVSNLEYGVSNEDIRELFAEIGDLKRYAVHYDK 137
Query: 722 NGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGANG 543
NG GSAEVVY RRS+AF A+ KYNN GKPMKIE +G A +++R+N+T G NG
Sbjct: 138 NGRSTGSAEVVYTRRSEAFAALKKYNNVLLDGKPMKIEIVGVTGEAPISARVNVT-GING 196
Query: 542 R--RSVLKTPRPRYLRNIDILDHGAGSLEHG--RTCXXXXXXXXXXXXXXXXXXXRPEEK 375
R R+V+ TP P R + GAG G R +P EK
Sbjct: 197 RRKRTVVMTPGPGRGRGFAPSNRGAGQRSRGGLRNLGRGRGRGRGRGGHGGRGKKQPLEK 256
Query: 374 SAKELGKELENDQAGTTQ 321
SA EL KEL+ A Q
Sbjct: 257 SADELDKELDTYHAEAMQ 274
>OAY60513.1 hypothetical protein MANES_01G118500 [Manihot esculenta]
Length = 265
Score = 160 bits (405), Expect = 3e-41
Identities = 101/200 (50%), Positives = 118/200 (59%), Gaps = 8/200 (4%)
Frame = -2
Query: 896 PGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDKNG 717
P Q ++LED +A G +G E GAKL VSNL GVSNEDIRELFSEIG L RY +HYDKNG
Sbjct: 72 PWQYDLLEDSIRAAGITGAEGGAKLYVSNLDYGVSNEDIRELFSEIGGLKRYAVHYDKNG 131
Query: 716 SPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGANGR- 540
P GSAEVVY RRSDAF A KYNN GKPMKIE +G+ ++R+N+T G NGR
Sbjct: 132 RPSGSAEVVYTRRSDAFAAFKKYNNVLLDGKPMKIEIMGTSAEMPFSARVNVT-GINGRR 190
Query: 539 -RSVLKTPRPRYLR-NIDILDHGA-----GSLEHGRTCXXXXXXXXXXXXXXXXXXXRPE 381
R+V+ TP P R +HG+ G+L GR +P
Sbjct: 191 KRTVVMTPGPGRTRGTAPPTNHGSSQNRRGALRSGR------GRGRGSGRGRGRGRKQPF 244
Query: 380 EKSAKELGKELENDQAGTTQ 321
KSA EL KELEN A TQ
Sbjct: 245 LKSADELDKELENYHADATQ 264
>XP_007022819.2 PREDICTED: THO complex subunit 4D [Theobroma cacao]
Length = 262
Score = 160 bits (404), Expect = 4e-41
Identities = 96/197 (48%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T ++P Q+++ ED +A G SGVE G KL VSNL GV+NEDIRELFSEIGEL RY +HY
Sbjct: 69 TRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVTNEDIRELFSEIGELKRYAVHY 128
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DKNG P GSAEVVY RRSDAF A+ +YNN GKPMKIE +G+ +++R+N+T G
Sbjct: 129 DKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKIEIVGANAEVPISARVNVT-GI 187
Query: 548 NGR--RSVLKTPRPRYLRNIDILDHG---AGSLEHGRTCXXXXXXXXXXXXXXXXXXXRP 384
NGR R+V+ TP P R+ + G + GR+ +P
Sbjct: 188 NGRRKRAVVLTPGPGQSRSSAGPNRSLNRRGGMRSGRS--------GSRGRGRGRGKKKP 239
Query: 383 EEKSAKELGKELENDQA 333
EKSA +L KELEN A
Sbjct: 240 IEKSADDLDKELENYHA 256
>EOY14344.1 RNA-binding family protein, putative isoform 1 [Theobroma cacao]
Length = 262
Score = 160 bits (404), Expect = 4e-41
Identities = 96/197 (48%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Frame = -2
Query: 908 TENSPGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHY 729
T ++P Q+++ ED +A G SGVE G KL VSNL GV+NEDIRELFSEIGEL RY +HY
Sbjct: 69 TRSTPWQHDLFEDSLRAAGISGVEVGTKLYVSNLDLGVTNEDIRELFSEIGELKRYAVHY 128
Query: 728 DKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITGGA 549
DKNG P GSAEVVY RRSDAF A+ +YNN GKPMKIE +G+ +++R+N+T G
Sbjct: 129 DKNGRPSGSAEVVYLRRSDAFAALKRYNNVLLDGKPMKIEIVGANAEVPISARVNVT-GI 187
Query: 548 NGR--RSVLKTPRPRYLRNIDILDHG---AGSLEHGRTCXXXXXXXXXXXXXXXXXXXRP 384
NGR R+V+ TP P R+ + G + GR+ +P
Sbjct: 188 NGRRKRAVVLTPGPGQSRSSAGPNRSLNRRGGMRSGRS--------GSRGRGRGRGKKKP 239
Query: 383 EEKSAKELGKELENDQA 333
EKSA +L KELEN A
Sbjct: 240 IEKSADDLDKELENYHA 256
>XP_006364627.1 PREDICTED: THO complex subunit 4D [Solanum tuberosum]
XP_006364628.1 PREDICTED: THO complex subunit 4D
[Solanum tuberosum]
Length = 282
Score = 160 bits (405), Expect = 5e-41
Identities = 82/136 (60%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Frame = -2
Query: 923 QTMCGTENSPGQNNVLEDRFKAVGSSGV-ESGAKLQVSNLSDGVSNEDIRELFSEIGELV 747
+T T+N P QN + ED +A G S V ESG KL VSNL GV+NEDIRELFSE+GELV
Sbjct: 70 KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDIGVTNEDIRELFSEMGELV 129
Query: 746 RYGIHYDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRL 567
R+ IHYDKNG P G+AEVV+ARRSDAFQA+ +YNN Q GKPMKIE +GS +++R+
Sbjct: 130 RFAIHYDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLSARV 189
Query: 566 NITGGANGRRSVLKTP 519
N+ GG N RR+V+ P
Sbjct: 190 NVVGGTNRRRTVVMAP 205
>XP_004250178.1 PREDICTED: THO complex subunit 4D [Solanum lycopersicum]
Length = 283
Score = 160 bits (405), Expect = 5e-41
Identities = 82/136 (60%), Positives = 101/136 (74%), Gaps = 1/136 (0%)
Frame = -2
Query: 923 QTMCGTENSPGQNNVLEDRFKAVGSSGV-ESGAKLQVSNLSDGVSNEDIRELFSEIGELV 747
+T T+N P QN + ED +A G S V ESG KL VSNL GV+NEDIRELFSE+GELV
Sbjct: 70 KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDVGVTNEDIRELFSEMGELV 129
Query: 746 RYGIHYDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRL 567
R+ IHYDKNG P G+AEVV+ARRSDAFQA+ +YNN Q GKPMKIE +GS +++R+
Sbjct: 130 RFAIHYDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLSARV 189
Query: 566 NITGGANGRRSVLKTP 519
N+ GG N RR+V+ P
Sbjct: 190 NVVGGTNRRRTVVMAP 205
>OAY57175.1 hypothetical protein MANES_02G076900 [Manihot esculenta]
Length = 268
Score = 159 bits (401), Expect = 1e-40
Identities = 95/198 (47%), Positives = 118/198 (59%), Gaps = 6/198 (3%)
Frame = -2
Query: 896 PGQNNVLEDRFKAVGSSGVESGAKLQVSNLSDGVSNEDIRELFSEIGELVRYGIHYDKNG 717
P Q+++LED +A G +GVE G KL VSNL GVSNEDIRELFSEIG+L RY +HYDKNG
Sbjct: 72 PWQHDLLEDSIRAAGITGVEIGTKLYVSNLDYGVSNEDIRELFSEIGDLKRYAVHYDKNG 131
Query: 716 SPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRLNITG-GANGR 540
P GSAEVVY RRSDAF A+ KYNN GKPMKIE +G+ ++R+N+TG +
Sbjct: 132 RPSGSAEVVYTRRSDAFAALKKYNNVLLDGKPMKIEIVGASAEMPFSARVNVTGVDGRRK 191
Query: 539 RSVLKTPRPRYLRNIDILDHGA-----GSLEHGRTCXXXXXXXXXXXXXXXXXXXRPEEK 375
R+V+ TP P +R + G+ G L +GR +P K
Sbjct: 192 RTVVMTPGPGRVRAAAPSNRGSGQNRRGGLRNGR--GRGQGQGQGRGRGRGRGKKQPFVK 249
Query: 374 SAKELGKELENDQAGTTQ 321
SA +L KELEN A Q
Sbjct: 250 SADDLDKELENYHAEAMQ 267
>XP_015058414.1 PREDICTED: THO complex subunit 4D [Solanum pennellii]
Length = 282
Score = 158 bits (399), Expect = 3e-40
Identities = 81/133 (60%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
Frame = -2
Query: 923 QTMCGTENSPGQNNVLEDRFKAVGSSGV-ESGAKLQVSNLSDGVSNEDIRELFSEIGELV 747
+T T+N P QN + ED +A G S V ESG KL VSNL GV+NEDIRELFSE+GELV
Sbjct: 70 KTFRRTKNLPWQNGLFEDSLRAAGLSSVLESGTKLYVSNLDVGVTNEDIRELFSEMGELV 129
Query: 746 RYGIHYDKNGSPCGSAEVVYARRSDAFQAVNKYNNTQFHGKPMKIENLGSIVMAHVASRL 567
R+ IHYDKNG P G+AEVV+ARRSDAFQA+ +YNN Q GKPMKIE +GS +++R+
Sbjct: 130 RFAIHYDKNGRPSGAAEVVFARRSDAFQALKRYNNVQLDGKPMKIEIVGSNPEIPLSARV 189
Query: 566 NITGGANGRRSVL 528
N+ GG N RR+V+
Sbjct: 190 NVVGGTNRRRTVV 202