BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum23_contig00000236
         (1531 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017980817.1 PREDICTED: RNA-binding protein 24 [Theobroma cacao]    252   3e-77
OMP01237.1 hypothetical protein COLO4_12046 [Corchorus olitorius]     249   5e-76
OMO94466.1 hypothetical protein CCACVL1_05994 [Corchorus capsula...   249   5e-76
XP_011074197.1 PREDICTED: RNA-binding protein 38 [Sesamum indicum]    242   2e-73
CDP01070.1 unnamed protein product [Coffea canephora]                 242   3e-73
XP_019175416.1 PREDICTED: RNA-binding protein 24-A [Ipomoea nil]      240   3e-72
XP_010664338.1 PREDICTED: RNA-binding protein 38 isoform X2 [Vit...   239   3e-72
XP_003634414.1 PREDICTED: RNA-binding protein 38 isoform X1 [Vit...   239   3e-72
KJB59019.1 hypothetical protein B456_009G236000 [Gossypium raimo...   239   4e-72
XP_016687168.1 PREDICTED: RNA-binding protein 38-like [Gossypium...   239   5e-72
XP_012446741.1 PREDICTED: RNA-binding protein 38 isoform X1 [Gos...   239   5e-72
XP_012446742.1 PREDICTED: RNA-binding protein 38 isoform X2 [Gos...   237   1e-71
KJB59021.1 hypothetical protein B456_009G236000 [Gossypium raimo...   236   2e-71
KJB59015.1 hypothetical protein B456_009G236000 [Gossypium raimo...   236   2e-71
XP_017627570.1 PREDICTED: RNA-binding protein 38 [Gossypium arbo...   236   4e-71
KJB59018.1 hypothetical protein B456_009G236000 [Gossypium raimo...   235   2e-70
XP_016748828.1 PREDICTED: RNA-binding protein 38-like isoform X3...   234   2e-70
XP_010098613.1 RNA-binding protein 24 [Morus notabilis] EXB75352...   228   1e-67
XP_009372873.1 PREDICTED: RNA-binding protein 38 isoform X2 [Pyr...   226   7e-67
XP_019244929.1 PREDICTED: RNA-binding protein 38-like [Nicotiana...   224   2e-66

>XP_017980817.1 PREDICTED: RNA-binding protein 24 [Theobroma cacao]
          Length = 265

 Score =  252 bits (644), Expect = 3e-77
 Identities = 145/260 (55%), Positives = 166/260 (63%), Gaps = 14/260 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++SYFEQFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRSYFEQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVIDGRRANCNIA+LG     PP GRNQ       G  P+QGV+  
Sbjct: 65   RDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQ-------GSSPYQGVAQQ 117

Query: 771  SSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXYX 592
               S+SGVA P+ PP  P  P+IYPPYGY  YSP+Y YH                   Y 
Sbjct: 118  GGPSYSGVAAPVPPPPPPPPPVIYPPYGYPTYSPDYGYH-------QALYNPQIQQPQYY 170

Query: 591  XXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSSY 430
                         PY +G  YS++A P+G F   Q QR       YYP  TQ++GSFS+Y
Sbjct: 171  HQLYGSSSTTMGSPYYYG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--TQMEGSFSTY 225

Query: 429  PRRNPIPFE-PRNTLPSSSD 373
            P   P PF   R   PSS+D
Sbjct: 226  P---PPPFHLTRYPFPSSTD 242


>OMP01237.1 hypothetical protein COLO4_12046 [Corchorus olitorius]
          Length = 269

 Score =  249 bits (636), Expect = 5e-76
 Identities = 145/267 (54%), Positives = 167/267 (62%), Gaps = 16/267 (5%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA   +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YFEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAAFPHYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGEILEAVIITDKNTGKSKGY 60

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RAC DP PVIDGRRANCNIA+LG     PP GRNQV         P+Q
Sbjct: 61   GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQVSS-------PYQ 113

Query: 780  GVS----SSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXX 613
            GV+     + S+SGVA  + PP  P  P+IYPPYGY  YSP Y YH              
Sbjct: 114  GVAQQQQGAPSYSGVAAAVPPPPPPPPPVIYPPYGYPTYSPEYGYH------QALYNPQI 167

Query: 612  XXXXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQL 451
                 Y              PY +G  YS++A P+G F   Q QR       YYP  TQ+
Sbjct: 168  QQPQYYHQMYGSSSSTTMGSPYYYG--YSLQA-PRGTFSAAQAQRIPGPSYLYYP--TQM 222

Query: 450  DGSFSSYPRRNPIPFE-PRNTLPSSSD 373
            +GSFS+YP   P PF   R+  PSS+D
Sbjct: 223  EGSFSTYP---PPPFHLTRHPFPSSTD 246


>OMO94466.1 hypothetical protein CCACVL1_05994 [Corchorus capsularis]
          Length = 269

 Score =  249 bits (636), Expect = 5e-76
 Identities = 145/267 (54%), Positives = 167/267 (62%), Gaps = 16/267 (5%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA   +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YFEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAAFPHYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGEILEAVIITDKNTGKSKGY 60

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RAC DP PVIDGRRANCNIA+LG     PP GRNQV         P+Q
Sbjct: 61   GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQVSS-------PYQ 113

Query: 780  GVS----SSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXX 613
            GV+     + S+SGVA  + PP  P  P+IYPPYGY  YSP Y YH              
Sbjct: 114  GVAQQQQGAPSYSGVAAAVPPPPPPPPPVIYPPYGYPTYSPEYGYH------QALYNPQI 167

Query: 612  XXXXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQL 451
                 Y              PY +G  YS++A P+G F   Q QR       YYP  TQ+
Sbjct: 168  QQPQYYHQMYGSSSSTTMGSPYYYG--YSLQA-PRGTFSAAQAQRIPSPSYLYYP--TQM 222

Query: 450  DGSFSSYPRRNPIPFE-PRNTLPSSSD 373
            +GSFS+YP   P PF   R+  PSS+D
Sbjct: 223  EGSFSTYP---PPPFHLTRHPFPSSTD 246


>XP_011074197.1 PREDICTED: RNA-binding protein 38 [Sesamum indicum]
          Length = 267

 Score =  242 bits (618), Expect = 2e-73
 Identities = 141/263 (53%), Positives = 162/263 (61%), Gaps = 12/263 (4%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MAHQ +YRSPFGDTT TKVFVGGLAWETPTDV++ YFEQFGEILEAVII DK TGKSKGY
Sbjct: 1    MAHQ-HYRSPFGDTTLTKVFVGGLAWETPTDVMRGYFEQFGEILEAVIINDKTTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGK-FEGGGVVPH 784
            GFVTFRDPESA RACADP PVIDGRRANCNIA+LG     PP GRNQVG  ++GGG    
Sbjct: 60   GFVTFRDPESAKRACADPNPVIDGRRANCNIASLGRPRPSPPRGRNQVGSLYQGGG---- 115

Query: 783  QGVSSSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXX 604
                 S+SF  +  P  PP+ P  P++YPPYGY  Y P+Y Y                  
Sbjct: 116  -----SSSFPSLPPPPPPPLPPPPPVMYPPYGYATYPPDYGYQ-------QTMYNPQVQQ 163

Query: 603  XXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQRF------YYPTTTQLDGS 442
              Y              PY +G  YS++A P+G FP    QRF      YYP  TQ++ S
Sbjct: 164  AQYYNQVYGASSSTMGAPYYYG--YSVQA-PRGTFPIPPAQRFQGPSYVYYP--TQVEAS 218

Query: 441  FSSYPRRNPIPFEPRNTLPSSSD 373
              +YP   P+    R T P S+D
Sbjct: 219  SPTYPPPLPLLQPRRLTFPPSTD 241


>CDP01070.1 unnamed protein product [Coffea canephora]
          Length = 280

 Score =  242 bits (618), Expect = 3e-73
 Identities = 141/254 (55%), Positives = 160/254 (62%), Gaps = 12/254 (4%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+Q +YRSPFGDTTYTKVFVGGLAWETPTDV++ +FEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAYQ-HYRSPFGDTTYTKVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGK-FEGGGVVPH 784
            GFVTFRDPESA RACADP P+IDGRRANCNIA+LG     PP GR Q G  ++GG V+  
Sbjct: 60   GFVTFRDPESARRACADPNPMIDGRRANCNIASLGRPRPSPPRGRTQGGNPYQGGPVMAQ 119

Query: 783  QGVSSSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXX 604
            QG SS  S+SGV  P   P  P    +YPPYGY  Y P Y Y                  
Sbjct: 120  QGASS--SYSGVPTPTPLPPPPPPAYVYPPYGYATYPPEYGY-------PQGIYNPQLQQ 170

Query: 603  XXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGS 442
              Y              PY +G  YSM+AS +G FP N  QR       YYP   Q++GS
Sbjct: 171  PQYYHQVYGPSSSGMGSPYFYG--YSMQAS-RGTFPANPAQRIQGPSYLYYP--PQMEGS 225

Query: 441  FSSYPRRNPIPFEP 400
            FS+YP   P P  P
Sbjct: 226  FSTYPPPPPPPPPP 239


>XP_019175416.1 PREDICTED: RNA-binding protein 24-A [Ipomoea nil]
          Length = 292

 Score =  240 bits (613), Expect = 3e-72
 Identities = 154/280 (55%), Positives = 178/280 (63%), Gaps = 27/280 (9%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+Q +YRSPFGDTTYTKVFVGGLAWETPTDV++ YFEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAYQ-HYRSPFGDTTYTKVFVGGLAWETPTDVMRRYFEQFGEILEAVIITDKNTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RAC +P PVIDGRRANCNIA+LG     PP GR Q G      VVP Q
Sbjct: 60   GFVTFRDPESARRACDNPNPVIDGRRANCNIASLGRPRPSPPRGRAQGGSPYQANVVPPQ 119

Query: 780  GVSSSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXX 601
            G SSS S+SGVA PL PP  P  P+IYPPYGY AY P+Y+YH                  
Sbjct: 120  GASSS-SYSGVAAPLPPP--PPPPVIYPPYGYAAYPPDYAYHQGIYNPQFQQAAAAQYYP 176

Query: 600  XYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQRF-------YYPTTTQLD-- 448
             +           G+ PY +G  YS+ AS +G F    +QRF       YYP T Q+D  
Sbjct: 177  HHHVYGSSSSSGMGS-PYGYG--YSLPAS-RGTFSAT-SQRFHGGPSYLYYP-TPQMDAA 230

Query: 447  ------GSFS--SYPRRNPIP----FEPRNTLP-SSSDPR 367
                   SFS  +YP  +P+P      PR+  P SSS+P+
Sbjct: 231  AVAAAAASFSPTAYP-PSPLPPLLQPAPRHPFPTSSSEPQ 269


>XP_010664338.1 PREDICTED: RNA-binding protein 38 isoform X2 [Vitis vinifera]
          Length = 275

 Score =  239 bits (611), Expect = 3e-72
 Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 24/275 (8%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+Q +YRSPFGDTT+TKVFVGGLAWETPTDV++ +FEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAYQ-HYRSPFGDTTFTKVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RAC DP PVIDGRRANCNIA+LG     PP GRNQ      GG   H 
Sbjct: 60   GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQ------GGNPYHA 113

Query: 780  GVS-SSTSFSGVAGPLI------PPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXX 622
            G S  ++SFSGV  PL       PP  P  P+IYPPYGY  Y+P+Y YH           
Sbjct: 114  GASQGASSFSGVPAPLAPPPPPPPPPPPPPPVIYPPYGYATYTPDYGYHQSLYNPQLQQP 173

Query: 621  XXXXXXXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTT 460
                                   PY +G  YS++AS +G F   Q  R       YYP  
Sbjct: 174  YYHQLYGASSSTVAS--------PYYYG--YSLQAS-RGTFSGPQAHRVQGPSYLYYP-- 220

Query: 459  TQLDGSFSSYPRRNPIPFEP------RNTLPSSSD 373
            TQ++GSF +YP   P P  P      R   PSS+D
Sbjct: 221  TQMEGSFPTYP---PPPVPPTLQPTSRPPFPSSTD 252


>XP_003634414.1 PREDICTED: RNA-binding protein 38 isoform X1 [Vitis vinifera]
            CBI19171.3 unnamed protein product, partial [Vitis
            vinifera]
          Length = 276

 Score =  239 bits (611), Expect = 3e-72
 Identities = 145/275 (52%), Positives = 166/275 (60%), Gaps = 24/275 (8%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+Q +YRSPFGDTT+TKVFVGGLAWETPTDV++ +FEQFGEILEAVIITDK+TGKSKGY
Sbjct: 1    MAYQ-HYRSPFGDTTFTKVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RAC DP PVIDGRRANCNIA+LG     PP GRNQ      GG   H 
Sbjct: 60   GFVTFRDPESARRACVDPNPVIDGRRANCNIASLGRPRPSPPRGRNQ------GGNPYHA 113

Query: 780  GVS-SSTSFSGVAGPLI------PPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXX 622
            G S  ++SFSGV  PL       PP  P  P+IYPPYGY  Y+P+Y YH           
Sbjct: 114  GASQGASSFSGVPAPLAPPPPPPPPPPPPPPVIYPPYGYATYTPDYGYHQQSLYNPQLQQ 173

Query: 621  XXXXXXXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTT 460
                                   PY +G  YS++AS +G F   Q  R       YYP  
Sbjct: 174  PYYHQLYGASSSTVAS-------PYYYG--YSLQAS-RGTFSGPQAHRVQGPSYLYYP-- 221

Query: 459  TQLDGSFSSYPRRNPIPFEP------RNTLPSSSD 373
            TQ++GSF +YP   P P  P      R   PSS+D
Sbjct: 222  TQMEGSFPTYP---PPPVPPTLQPTSRPPFPSSTD 253


>KJB59019.1 hypothetical protein B456_009G236000 [Gossypium raimondii]
          Length = 258

 Score =  239 bits (609), Expect = 4e-72
 Identities = 140/261 (53%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QAVYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+ +PS +D
Sbjct: 226  YP---PPPFHPTRHPIPSPAD 243


>XP_016687168.1 PREDICTED: RNA-binding protein 38-like [Gossypium hirsutum]
          Length = 266

 Score =  239 bits (609), Expect = 5e-72
 Identities = 140/261 (53%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QALYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+ +PS +D
Sbjct: 226  YP---PPPFHPTRHPIPSPAD 243


>XP_012446741.1 PREDICTED: RNA-binding protein 38 isoform X1 [Gossypium raimondii]
            KJB59016.1 hypothetical protein B456_009G236000
            [Gossypium raimondii]
          Length = 266

 Score =  239 bits (609), Expect = 5e-72
 Identities = 140/261 (53%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QAVYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+ +PS +D
Sbjct: 226  YP---PPPFHPTRHPIPSPAD 243


>XP_012446742.1 PREDICTED: RNA-binding protein 38 isoform X2 [Gossypium raimondii]
            KJB59017.1 hypothetical protein B456_009G236000
            [Gossypium raimondii] KJB59020.1 hypothetical protein
            B456_009G236000 [Gossypium raimondii]
          Length = 245

 Score =  237 bits (605), Expect = 1e-71
 Identities = 139/261 (53%), Positives = 164/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QAVYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+ +PS ++
Sbjct: 226  YP---PPPFHPTRHPIPSPAE 243


>KJB59021.1 hypothetical protein B456_009G236000 [Gossypium raimondii]
          Length = 244

 Score =  236 bits (603), Expect = 2e-71
 Identities = 139/258 (53%), Positives = 162/258 (62%), Gaps = 15/258 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QAVYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPS 382
            YP   P PF P R+ +PS
Sbjct: 226  YP---PPPFHPTRHPIPS 240


>KJB59015.1 hypothetical protein B456_009G236000 [Gossypium raimondii]
          Length = 246

 Score =  236 bits (603), Expect = 2e-71
 Identities = 139/258 (53%), Positives = 162/258 (62%), Gaps = 15/258 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QAVYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPS 382
            YP   P PF P R+ +PS
Sbjct: 226  YP---PPPFHPTRHPIPS 240


>XP_017627570.1 PREDICTED: RNA-binding protein 38 [Gossypium arboreum] KHG16788.1
            RNA-binding 38 [Gossypium arboreum]
          Length = 266

 Score =  236 bits (603), Expect = 4e-71
 Identities = 139/261 (53%), Positives = 163/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIIT+K+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITEKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QALYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+  PS +D
Sbjct: 226  YP---PPPFHPTRHPFPSPAD 243


>KJB59018.1 hypothetical protein B456_009G236000 [Gossypium raimondii]
          Length = 284

 Score =  235 bits (600), Expect = 2e-70
 Identities = 139/272 (51%), Positives = 164/272 (60%), Gaps = 26/272 (9%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIITDK+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITDKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNIA+LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                    
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYHQQRVEATIFGKGMLKMGMQA 177

Query: 594  XXXXXXXXXXXGNY-----------PYNFGGYYSMEASPKGAFPTNQTQR------FYYP 466
                        +            PY FG  YS++A P+G F   Q QR       YYP
Sbjct: 178  VYNPQIQQAQYYHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP 234

Query: 465  TTTQLDGSFSSYPRRNPIPFEP-RNTLPSSSD 373
              +Q++GSFS+YP   P PF P R+ +PS +D
Sbjct: 235  --SQMEGSFSTYP---PPPFHPTRHPIPSPAD 261


>XP_016748828.1 PREDICTED: RNA-binding protein 38-like isoform X3 [Gossypium
            hirsutum]
          Length = 245

 Score =  234 bits (596), Expect = 2e-70
 Identities = 137/261 (52%), Positives = 163/261 (62%), Gaps = 15/261 (5%)
 Frame = -2

Query: 1110 YYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGYGFVTF 931
            +YRSPFGDTT+TKVFVGGLAWETPT+ ++ YF+QFGEILEAVIIT+K+TGKSKGYGFVTF
Sbjct: 5    HYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITEKNTGKSKGYGFVTF 64

Query: 930  RDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQGVS-- 772
            RDPESA RAC DP PVI GRRANCNI++LG     PP GRNQ       G  P QGV+  
Sbjct: 65   RDPESARRACVDPNPVIGGRRANCNISSLGRPRPSPPRGRNQ-------GSSPFQGVAQQ 117

Query: 771  SSTSFSGVAGPL-IPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXXXXXY 595
             + S+SGVA  +  PP  P  P+IYPPYG+  YSP Y YH                   Y
Sbjct: 118  GTPSYSGVAAAVPPPPPPPLPPVIYPPYGFPTYSPEYGYH-------QALYNPQIQQAQY 170

Query: 594  XXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLDGSFSS 433
                          PY FG  YS++A P+G F   Q QR       YYP  +Q++GSFS+
Sbjct: 171  YHQLYGSSSTSMGSPYYFG--YSLQA-PRGTFSAPQAQRIPGPSYLYYP--SQMEGSFST 225

Query: 432  YPRRNPIPFEP-RNTLPSSSD 373
            YP   P PF P R+  PS ++
Sbjct: 226  YP---PPPFHPTRHPFPSPAE 243


>XP_010098613.1 RNA-binding protein 24 [Morus notabilis] EXB75352.1 RNA-binding
            protein 24 [Morus notabilis]
          Length = 274

 Score =  228 bits (580), Expect = 1e-67
 Identities = 139/260 (53%), Positives = 158/260 (60%), Gaps = 21/260 (8%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+  +YRS FGDTT+TKVFVGGLAWETPTD ++SYFEQFG+ILEAVIITDK+TGKSKGY
Sbjct: 1    MANYPHYRSQFGDTTFTKVFVGGLAWETPTDEMRSYFEQFGDILEAVIITDKNTGKSKGY 60

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGK-FEGGGVVPH 784
            GFVTFRDPESA RACA+P PVIDGRRANCNIA+LG     PP GRNQ G  F+GG    H
Sbjct: 61   GFVTFRDPESARRACANPNPVIDGRRANCNIASLGRPRPSPPRGRNQGGSPFQGGSPQGH 120

Query: 783  QGVSSSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSP-NYSYHXXXXXXXXXXXXXXXX 607
               S S S   V  PL PP  P  P+IY PY Y  Y+P +Y YH                
Sbjct: 121  AVPSYSGS---VPAPLPPPPPPPPPVIYQPYAYPTYTPADYGYHQAMYNPQVQQPAQYYH 177

Query: 606  XXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPT-NQTQRF-------YYPTTTQ- 454
                            N PY +G  YS++ SP+G F T  Q QR        YYP     
Sbjct: 178  QLYGTASSSTM-----NTPYYYG--YSLQ-SPRGPFSTVPQPQRIAGPPSYLYYPNPPHH 229

Query: 453  LDGSFSSYP-----RRNPIP 409
            L+GSFSSYP      R+P P
Sbjct: 230  LEGSFSSYPFQPTTTRHPFP 249


>XP_009372873.1 PREDICTED: RNA-binding protein 38 isoform X2 [Pyrus x bretschneideri]
          Length = 298

 Score =  226 bits (577), Expect = 7e-67
 Identities = 138/278 (49%), Positives = 159/278 (57%), Gaps = 25/278 (8%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MAH  +YRS FGDTT+TKVFVGGLAWETPTD ++ YFEQFGEILEAVII DK+TGKSKGY
Sbjct: 18   MAHP-HYRSQFGDTTFTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIIADKNTGKSKGY 76

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGKFEGGGVVPHQ 781
            GFVTFRDPESA RACA+P PVIDGRRANCNIA+LG     PP GRNQ       G  P+Q
Sbjct: 77   GFVTFRDPESARRACANPNPVIDGRRANCNIASLGRPRPSPPRGRNQ-------GATPYQ 129

Query: 780  G--VSSSTSFSGVAGPLIPPVQPASPIIYPPYGYMAYSP-NYSYHXXXXXXXXXXXXXXX 610
            G    ++ S+ GV  PL PP+ P++PIIYP Y Y  Y+P +Y YH               
Sbjct: 130  GNAPQAAQSYGGVP-PLPPPLPPSAPIIYPSYSYPTYTPADYGYH-----QAMYNPQVHQ 183

Query: 609  XXXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQR------FYYPTTTQLD 448
                Y              PY + GY     SP+G F T Q  R       YYPT     
Sbjct: 184  QPQYYPQVYGSSPSSPMGTPYYYHGYSFQSPSPRGTFSTPQAHRMPGPSYLYYPTHNMEP 243

Query: 447  GSFSSYP-----------RRNPIPFEPRNTLPSSSDPR 367
               SSYP           R NP  F   + LP S +P+
Sbjct: 244  SFSSSYPNPPLLQPPPTSRHNPPNF--TSPLPDSQNPQ 279


>XP_019244929.1 PREDICTED: RNA-binding protein 38-like [Nicotiana attenuata]
            OIT03981.1 putative rna-binding protein arp1 [Nicotiana
            attenuata]
          Length = 281

 Score =  224 bits (572), Expect = 2e-66
 Identities = 137/256 (53%), Positives = 160/256 (62%), Gaps = 19/256 (7%)
 Frame = -2

Query: 1125 MAHQNYYRSPFGDTTYTKVFVGGLAWETPTDVLKSYFEQFGEILEAVIITDKHTGKSKGY 946
            MA+Q +YRSPFGDTTYTKVFVGGLAWETPTD+++ YFEQFGEILEAVII DK+TGKSKGY
Sbjct: 1    MAYQ-HYRSPFGDTTYTKVFVGGLAWETPTDIMRRYFEQFGEILEAVIIADKNTGKSKGY 59

Query: 945  GFVTFRDPESATRACADPRPVIDGRRANCNIAALG-----PPPGRNQVGK-FEGGGVVPH 784
            GFVT+RDPESA RAC +P PVIDGRRANCNIA+LG     PP GR Q G  ++GGG+   
Sbjct: 60   GFVTYRDPESARRACENPNPVIDGRRANCNIASLGRPRPSPPRGRGQGGNPYQGGGI--P 117

Query: 783  QGVSSSTSFSGV-AGPLIPPVQPASPIIYPPYGYMAYSPNYSYHXXXXXXXXXXXXXXXX 607
            QG +SS S+SGV A PL  P  PA+P+IY PYGY  Y P+Y YH                
Sbjct: 118  QGPTSS-SYSGVAAAPLPLPPPPATPMIYSPYGYATYPPDY-YH-----------QGMYN 164

Query: 606  XXXYXXXXXXXXXXXGNYPYNFGGYYSMEASPKGAFPTNQTQRF---------YYPTT-- 460
                            + PY +G  YSM+ S +G F     QRF         YYPTT  
Sbjct: 165  QQYQQAQYYQQMYGSSSSPYYYG--YSMQGS-RGTFSAAHPQRFQGGPAASYLYYPTTPL 221

Query: 459  -TQLDGSFSSYPRRNP 415
               +  SFSS+    P
Sbjct: 222  PADVAASFSSFTSPPP 237