BLASTX nr result

ID: Lithospermum22_contig00047830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047830
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318017.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002336688.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-contain...    98   8e-19
ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...    93   2e-17

>ref|XP_002318017.1| predicted protein [Populus trichocarpa] gi|222858690|gb|EEE96237.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/76 (69%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   VYTGSADKKIKVWKKHSEETKHCLVATLNGHSFGINALALSTDESQLYSGHSDGAIVVWG 181
           VYTGSADK IKVW+K S+E+KH LVATL  H+ GINALALSTD S LYSG  D +IVVWG
Sbjct: 189 VYTGSADKNIKVWRKSSKESKHSLVATLEKHNSGINALALSTDGSVLYSGACDRSIVVWG 248

Query: 182 RSNYSNMVVSGALLGH 229
           +    NMVV GAL GH
Sbjct: 249 KDGGGNMVVVGALRGH 264


>ref|XP_002336688.1| predicted protein [Populus trichocarpa] gi|222836528|gb|EEE74935.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/76 (69%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   VYTGSADKKIKVWKKHSEETKHCLVATLNGHSFGINALALSTDESQLYSGHSDGAIVVWG 181
           VYTGSADK IKVW+K S+E+KH LVATL  H+ GINALALSTD S LYSG  D +IVVWG
Sbjct: 81  VYTGSADKNIKVWRKSSKESKHSLVATLEKHNSGINALALSTDGSVLYSGACDRSIVVWG 140

Query: 182 RSNYSNMVVSGALLGH 229
           +    NMVV GAL GH
Sbjct: 141 KDGGGNMVVVGALRGH 156


>ref|XP_002321562.1| predicted protein [Populus trichocarpa] gi|222868558|gb|EEF05689.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  104 bits (260), Expect = 7e-21
 Identities = 54/76 (71%), Positives = 58/76 (76%)
 Frame = +2

Query: 2   VYTGSADKKIKVWKKHSEETKHCLVATLNGHSFGINALALSTDESQLYSGHSDGAIVVWG 181
           VYTGSADKKIKVW+K SEE KH LVATL  H  GINALALSTD S LYSG  D +IVVW 
Sbjct: 189 VYTGSADKKIKVWRKSSEENKHSLVATLEKHMSGINALALSTDGSVLYSGACDRSIVVWE 248

Query: 182 RSNYSNMVVSGALLGH 229
           + +  NMVV GAL GH
Sbjct: 249 KDDDGNMVVLGALRGH 264


>ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 409

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/76 (65%), Positives = 56/76 (73%)
 Frame = +2

Query: 2   VYTGSADKKIKVWKKHSEETKHCLVATLNGHSFGINALALSTDESQLYSGHSDGAIVVWG 181
           +YTGSADK IKVW+K  E+ KH  VATL  H+ GINALALSTD S LYSG SD +IVVW 
Sbjct: 248 IYTGSADKTIKVWRKAPEDKKHSQVATLEKHNSGINALALSTDGSVLYSGASDRSIVVWE 307

Query: 182 RSNYSNMVVSGALLGH 229
           +    NMVV GAL GH
Sbjct: 308 KDYSGNMVVVGALRGH 323


>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/79 (62%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
 Frame = +2

Query: 2   VYTGSADKKIKVWKKHSEETKHCLVATLNGHSFGINALALSTDESQLYSGHSDGAIVVWG 181
           VYTGSAD+KIKVWKKH  E KH LVATL  H   +NALALS D S LYSG  D +I+VW 
Sbjct: 259 VYTGSADRKIKVWKKHEGEKKHRLVATLEKHKSAVNALALSPDGSVLYSGACDRSIIVWE 318

Query: 182 R---SNYSNMVVSGALLGH 229
           +   S+  +MVV+GAL GH
Sbjct: 319 KDTSSSGGHMVVAGALRGH 337


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