BLASTX nr result

ID: Lithospermum22_contig00047761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047761
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...    42   2e-08
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    47   3e-07
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        42   4e-07
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    46   6e-07

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   INTVLFGSSNYWAQCVLLSMKMCYKIEQLIKAFLWSSTS-DKYKFKISWNQV 153
           + +V+F ++NYW QC+ L   +  +IE + ++FLW+  S    K  ++WN+V
Sbjct: 93  LRSVIFATANYWMQCLPLPKGVIRRIEAVCRSFLWTGKSCVTKKSPVAWNKV 144



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 179 LGIKKLHEWNLACMAYHIWNICCNKETLWVRWLH-FYRRG 295
           L +     WN AC+   +WN+   +++LW++W+H +Y RG
Sbjct: 153 LNVINFQSWNKACLIKLLWNLYKKEDSLWIQWVHTYYTRG 192


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +2

Query: 158  RTKK*RRLGIKKLHEWNLACMAYHIWNICCNKETLWVRWLHFY 286
            R K    +GI  L  WN+  +   +WNIC N E LWV W+H Y
Sbjct: 1059 RNKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVMWVHTY 1101



 Score = 32.3 bits (72), Expect(2) = 3e-07
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 1    INTVLFGSSNYWAQCVLLSMKMCYKIEQLIKAFLWSSTSD-KYKFKISWNQVGKNK 165
            + ++    + YW QC  L   +  KI  + ++F+W+   +   K  ++W+ + +NK
Sbjct: 1006 VKSITSAIAMYWMQCFPLPQFVLRKINDICRSFVWTGKQEISKKSLVAWDTMCRNK 1061


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 41.6 bits (96), Expect(2) = 4e-07
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +1

Query: 1   INTVLFGSSNYWAQCVLLSMKMCYKIEQLIKAFLWSSTSDKYK-FKISW 144
           I++V+FGS N+W    LL      +IE L   FLWS   ++ K  K+SW
Sbjct: 807 ISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSW 855



 Score = 37.0 bits (84), Expect(2) = 4e-07
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +2

Query: 179 LGIKKLHEWNLACMAYHIWNICCNKETLWVRWLHFYRRGR 298
           LG+++L EWN       IW +   K++LW  W H +   R
Sbjct: 867 LGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSR 906


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 46.2 bits (108), Expect(2) = 6e-07
 Identities = 19/43 (44%), Positives = 24/43 (55%)
 Frame = +2

Query: 158  RTKK*RRLGIKKLHEWNLACMAYHIWNICCNKETLWVRWLHFY 286
            R K    +GI  L  WN+  +   +WNIC N E LWV W+H Y
Sbjct: 1176 RNKSQGGVGIINLQVWNIVSLMKCLWNICRNSENLWVLWVHTY 1218



 Score = 32.0 bits (71), Expect(2) = 6e-07
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 1    INTVLFGSSNYWAQCVLLSMKMCYKIEQLIKAFLWSSTSD-KYKFKISWNQVGKNK 165
            + ++    + YW QC  L   +  KI  + ++F+W+   +   K  ++W+ + +NK
Sbjct: 1123 VKSITSAIAMYWMQCFPLPQFVLRKINAICRSFVWTGKQEISKKSLVAWDTMCRNK 1178


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