BLASTX nr result

ID: Lithospermum22_contig00047729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047729
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804...    56   3e-06
gb|AAD17416.1| putative non-LTR retroelement reverse transcripta...    54   1e-05

>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
            predicted protein [Populus trichocarpa]
          Length = 819

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
 Frame = -2

Query: 375  KPFKYQHFWSHHVRFTSIVSECWEQEVIGHGLFAFHSKMKNVRGALKC--------LRSR 220
            KPF++   W  H  F  +V + W+Q   G  ++    K++ ++  LK         +  R
Sbjct: 620  KPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPMYQLCCKLRKLKQELKLFNMAHFSNISDR 679

Query: 219  VKEKQIELDEVNCKIYGGCIEPSILAKASNLNIEYKQLCDAERQLYKSKARMQWYKDADA 40
            V++ + ++D+    ++     P +  +  ++  +Y     AE   +K KAR+QW    D 
Sbjct: 680  VRDAKNKMDKAQQALHTAHENPILCMRERDVVHKYASTVRAEESFFKQKARIQWLSLGDQ 739

Query: 39   SASYFHKNMSMHQ 1
            + SYFHK+++  Q
Sbjct: 740  NTSYFHKSVNGRQ 752


>ref|XP_003530391.1| PREDICTED: uncharacterized protein LOC100804594 [Glycine max]
          Length = 4413

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 9/135 (6%)
 Frame = -2

Query: 378  PKPFKYQHFWSHHVRFTSIVSECWEQEVIGH-GLFAFHSKMKNVRGALK--------CLR 226
            PKPF+    W  H  + +++ E W  ++ G  G  A  +K++N+R A+K           
Sbjct: 885  PKPFRVMDCWLTHKGYQAMIKEAWNSDMQGGWGGIALKNKLRNLRHAIKQWCKDQGDIKA 944

Query: 225  SRVKEKQIELDEVNCKIYGGCIEPSILAKASNLNIEYKQLCDAERQLYKSKARMQWYKDA 46
            S+++  + +L ++  +     +  S       L  E   +  A   L + K+R +W K+ 
Sbjct: 945  SKIQSLKQKLSDLENQDAHRALSDSEALTKKTLQQELWDISIAYESLLRQKSRAKWIKEG 1004

Query: 45   DASASYFHKNMSMHQ 1
            D +++YFH++++  +
Sbjct: 1005 DRNSAYFHRDINFRR 1019


>gb|AAD17416.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 444

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
 Frame = -2

Query: 375 KPFKYQHFWSHHVRFTSIVSECW-EQEVIGHGLFAFHSKMKNVRGALKCLRSRVKEKQIE 199
           +PFK+ +F  ++  F ++V E W    V+G  +F    K+K ++  +K   SR+    IE
Sbjct: 73  RPFKFYNFLLNNEEFLNVVIENWYSTNVVGSHMFRVSKKLKALKKPIKDF-SRLNYSGIE 131

Query: 198 LDEVNCKIYGGCIEPSILAKASNLNI--------EYKQLCDAERQLYKSKARMQWYKDAD 43
           L       +    +   LA AS+LN         ++  L  AE   +  ++R+ W+ + D
Sbjct: 132 LRTKEAHEWFLRRQDLTLANASDLNAALELEAQRKWLLLSSAEESFFHQRSRVSWFAEGD 191

Query: 42  ASASYFHK 19
           ++ SYFH+
Sbjct: 192 SNTSYFHR 199


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