BLASTX nr result

ID: Lithospermum22_contig00047716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047716
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cuc...   188   3e-46
ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus ...   183   1e-44
ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   181   5e-44
ref|XP_002326613.1| predicted protein [Populus trichocarpa] gi|2...   181   7e-44
ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...   180   1e-43

>ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cucumis sativus]
           gi|449524196|ref|XP_004169109.1| PREDICTED: F-box
           protein At5g07670-like [Cucumis sativus]
          Length = 526

 Score =  188 bits (478), Expect = 3e-46
 Identities = 88/111 (79%), Positives = 97/111 (87%)
 Frame = -2

Query: 333 VAEECPILQELELHRCNDQVLRGIGACSNLQILKLIGNVEGLYGSVVSDVGLTILAQGCS 154
           VAEEC  LQELELH+CND +LRGI AC NLQILKLIGNV+GLY SVV+D+GLTILAQGC 
Sbjct: 234 VAEECETLQELELHKCNDNLLRGIAACENLQILKLIGNVDGLYSSVVTDIGLTILAQGCK 293

Query: 153 RLVKLELSACEGGFEGIKAIGQCCLMLEELILAHHRMEDGWLPALSYCENL 1
           RLVKLEL+ CEG F+GIKAIGQCC MLEEL +  HRM+DGWL ALSYCENL
Sbjct: 294 RLVKLELNGCEGSFDGIKAIGQCCQMLEELTICDHRMDDGWLAALSYCENL 344


>ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550085|gb|EEF51572.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 531

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/111 (78%), Positives = 95/111 (85%)
 Frame = -2

Query: 333 VAEECPILQELELHRCNDQVLRGIGACSNLQILKLIGNVEGLYGSVVSDVGLTILAQGCS 154
           VAEEC  LQELELH+CND VLRGI AC NLQILKL+GNV GLY S+VSD+GLTILAQG  
Sbjct: 227 VAEECLTLQELELHKCNDNVLRGIAACENLQILKLVGNVGGLYSSLVSDIGLTILAQGSK 286

Query: 153 RLVKLELSACEGGFEGIKAIGQCCLMLEELILAHHRMEDGWLPALSYCENL 1
           RLVKLELS CEG F+GIKAIGQCC MLEEL  + HRM+DGWL A+SYCENL
Sbjct: 287 RLVKLELSGCEGSFDGIKAIGQCCQMLEELTFSDHRMDDGWLSAISYCENL 337


>ref|XP_003540579.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g07670-like
           [Glycine max]
          Length = 497

 Score =  181 bits (459), Expect = 5e-44
 Identities = 85/111 (76%), Positives = 95/111 (85%)
 Frame = -2

Query: 333 VAEECPILQELELHRCNDQVLRGIGACSNLQILKLIGNVEGLYGSVVSDVGLTILAQGCS 154
           VAEEC  LQELEL RC+D VLRGI AC NLQILKL+G+V+G Y SVVSD+GLTILAQGC 
Sbjct: 212 VAEECSTLQELELQRCSDNVLRGIAACGNLQILKLVGHVDGFYDSVVSDIGLTILAQGCK 271

Query: 153 RLVKLELSACEGGFEGIKAIGQCCLMLEELILAHHRMEDGWLPALSYCENL 1
           RLVKLELS CEG F+GIKAIG+CC MLEEL  + HRM+DGWL A+SYCENL
Sbjct: 272 RLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMDDGWLAAISYCENL 322


>ref|XP_002326613.1| predicted protein [Populus trichocarpa] gi|222833935|gb|EEE72412.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/110 (76%), Positives = 93/110 (84%)
 Frame = -2

Query: 330 AEECPILQELELHRCNDQVLRGIGACSNLQILKLIGNVEGLYGSVVSDVGLTILAQGCSR 151
           AE+C  LQELELH+CND  LRGI AC NLQILKL+GNV+G YGS+VSD+GLTILAQGC R
Sbjct: 58  AEDCLTLQELELHKCNDDALRGIAACMNLQILKLVGNVDGFYGSLVSDIGLTILAQGCKR 117

Query: 150 LVKLELSACEGGFEGIKAIGQCCLMLEELILAHHRMEDGWLPALSYCENL 1
           LVKLELS CEG F+GIKAIGQCC MLEEL +  HRM+ GWL  LSYCENL
Sbjct: 118 LVKLELSGCEGSFDGIKAIGQCCQMLEELTICDHRMDCGWLAGLSYCENL 167


>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
           gi|222840928|gb|EEE78475.1| f-box family protein
           [Populus trichocarpa]
          Length = 551

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/111 (74%), Positives = 95/111 (85%)
 Frame = -2

Query: 333 VAEECPILQELELHRCNDQVLRGIGACSNLQILKLIGNVEGLYGSVVSDVGLTILAQGCS 154
           VAEEC  LQELELHRCND +LRGI AC NLQILKL+GNV+G YGS+VSD+GLTILAQG  
Sbjct: 233 VAEECLTLQELELHRCNDNLLRGIAACGNLQILKLVGNVDGFYGSLVSDIGLTILAQGSK 292

Query: 153 RLVKLELSACEGGFEGIKAIGQCCLMLEELILAHHRMEDGWLPALSYCENL 1
           RLVK+EL+ CEG F+G+KAIGQCC MLEEL +  HRM++GWL  LSYCENL
Sbjct: 293 RLVKIELNGCEGSFDGMKAIGQCCQMLEELTICDHRMDNGWLAGLSYCENL 343


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