BLASTX nr result

ID: Lithospermum22_contig00047702 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047702
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]     62   5e-08
dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]    62   5e-08
ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp....    62   5e-08
dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]                       62   5e-08
dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]    62   5e-08

>gb|AAO30095.1| splicing factor-like protein [Arabidopsis thaliana]
          Length = 527

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -1

Query: 214 IFEAFGPVELIQLPLDPETGHCKGFGFVQ 128
           IFEAFGPVEL+QLPLDPETG CKGFGF+Q
Sbjct: 284 IFEAFGPVELVQLPLDPETGQCKGFGFIQ 312


>dbj|BAB09409.1| splicing factor-like protein [Arabidopsis thaliana]
          Length = 604

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -1

Query: 214 IFEAFGPVELIQLPLDPETGHCKGFGFVQ 128
           IFEAFGPVEL+QLPLDPETG CKGFGF+Q
Sbjct: 284 IFEAFGPVELVQLPLDPETGQCKGFGFIQ 312


>ref|XP_002873428.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319265|gb|EFH49687.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -1

Query: 214 IFEAFGPVELIQLPLDPETGHCKGFGFVQ 128
           IFEAFGPVEL+QLPLDPETG CKGFGF+Q
Sbjct: 277 IFEAFGPVELVQLPLDPETGQCKGFGFIQ 305


>dbj|BAH57172.1| AT5G09880 [Arabidopsis thaliana]
          Length = 505

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -1

Query: 214 IFEAFGPVELIQLPLDPETGHCKGFGFVQ 128
           IFEAFGPVEL+QLPLDPETG CKGFGF+Q
Sbjct: 262 IFEAFGPVELVQLPLDPETGQCKGFGFIQ 290


>dbj|BAD93824.1| splicing factor-like protein [Arabidopsis thaliana]
          Length = 308

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = -1

Query: 214 IFEAFGPVELIQLPLDPETGHCKGFGFVQ 128
           IFEAFGPVEL+QLPLDPETG CKGFGF+Q
Sbjct: 65  IFEAFGPVELVQLPLDPETGQCKGFGFIQ 93


Top