BLASTX nr result

ID: Lithospermum22_contig00047574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047574
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas...    60   2e-11
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]    60   4e-10
emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]    56   9e-10
emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]    56   1e-09
emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera]    56   2e-09

>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
           x hybrida]
          Length = 389

 Score = 60.5 bits (145), Expect(3) = 2e-11
 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
 Frame = -2

Query: 177 FHERTKHIEIDCHFTRHKLLESLLHLVHMSTDGQVVDIMTK-----IHNYLVSNLGL 22
           FHERTKHIE+DCHF R KLL+ L+ L  + +  Q+ DI TK     +H  L+  LG+
Sbjct: 323 FHERTKHIELDCHFVREKLLDGLISLSFVPSSSQIADIFTKSLTGPLHRSLMGKLGV 379



 Score = 29.6 bits (65), Expect(3) = 2e-11
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = -3

Query: 230 VHLHCDNMSAMYIAKNHV 177
           V +HCDN SA++IAKN V
Sbjct: 305 VSVHCDNQSAIHIAKNPV 322



 Score = 23.1 bits (48), Expect(3) = 2e-11
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = -1

Query: 310 KHNAMAQASSKVVWIVRLLTELGV 239
           ++ ++ +  +++ WIVRLL +L V
Sbjct: 276 EYRSLRRLVAEIAWIVRLLHDLSV 299


>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
          Length = 1450

 Score = 59.7 bits (143), Expect(3) = 4e-10
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
 Frame = -2

Query: 177  FHERTKHIEIDCHFTRHKLLESLLHLVHMSTDGQVVDIMTKI-----HNYLVSNLGLLRP 13
            FHERTKHIE+DCHF R  + + L+ L ++ T  Q+ DI TK       +YL++ LG+  P
Sbjct: 1387 FHERTKHIEVDCHFIRDAITDGLIALSYVPTVTQLADIFTKALRKKQFDYLLAKLGIFEP 1446

Query: 12   STP 4
              P
Sbjct: 1447 HAP 1449



 Score = 26.6 bits (57), Expect(3) = 4e-10
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 236  RAVHLHCDNMSAMYIAKNHV 177
            +A+ L CD+ SA+++AKN V
Sbjct: 1367 KAIKLFCDSQSALHMAKNPV 1386



 Score = 21.9 bits (45), Expect(3) = 4e-10
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 310  KHNAMAQASSKVVWIVRLLTELGV 239
            ++ AMA  + ++ W+  LL  LGV
Sbjct: 1340 EYRAMAAVTCELKWLKGLLLSLGV 1363


>emb|CAN71132.1| hypothetical protein VITISV_007235 [Vitis vinifera]
          Length = 1259

 Score = 56.2 bits (134), Expect(2) = 9e-10
 Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
 Frame = -2

Query: 177  FHERTKHIEIDCHFTRHKLLESLLHLVHMSTDGQVVDIMTKIHN-----YLVSNLGLLRP 13
            +HERTKHIE+DCHF R K+ E+L+ + ++ T  Q+ DI TK  N     Y  + LG++  
Sbjct: 1196 YHERTKHIEVDCHFIREKIEENLVSIGYVKTGEQLRDIFTKALNGTPVEYFCNKLGMINI 1255

Query: 12   STP 4
              P
Sbjct: 1256 YAP 1258



 Score = 31.6 bits (70), Expect(2) = 9e-10
 Identities = 12/25 (48%), Positives = 21/25 (84%)
 Frame = -1

Query: 310  KHNAMAQASSKVVWIVRLLTELGVK 236
            ++ AMAQA+ +++WI +LL E+G+K
Sbjct: 1149 EYRAMAQATCEIIWIHQLLCEVGMK 1173


>emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
          Length = 1248

 Score = 56.2 bits (134), Expect(2) = 1e-09
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = -2

Query: 177  FHERTKHIEIDCHFTRHKLLESLLHLVHMSTDGQVVDIMTKIHN-----YLVSNLGLLRP 13
            +HERTKHIE+DCHF R K+ E+L+   ++ T  Q+ DI TK  N     Y  + LG++  
Sbjct: 1185 YHERTKHIEVDCHFIREKIQENLISTSYVKTGEQLGDIFTKALNGTRVEYFCNKLGMINI 1244

Query: 12   STP 4
              P
Sbjct: 1245 YAP 1247



 Score = 31.2 bits (69), Expect(2) = 1e-09
 Identities = 11/25 (44%), Positives = 20/25 (80%)
 Frame = -1

Query: 310  KHNAMAQASSKVVWIVRLLTELGVK 236
            ++ AMAQA+ +++W+  LL E+G+K
Sbjct: 1138 ENRAMAQATCEIMWLYHLLIEIGIK 1162


>emb|CAN69344.1| hypothetical protein VITISV_006017 [Vitis vinifera]
          Length = 383

 Score = 55.8 bits (133), Expect(3) = 2e-09
 Identities = 33/64 (51%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
 Frame = -2

Query: 177 FHERTKHIEIDCHFTRHKLLESLLHLVHMSTDGQVVDIMTKI-----HNYLVSNLGLLRP 13
           FHERTKHIEIDCHF R+ LL   L L  +S+  Q+ DI TK         LV NL L+  
Sbjct: 322 FHERTKHIEIDCHFIRYHLLHGALKLFSVSSKDQLADIFTKSLPKRRTRNLVDNLKLV-- 379

Query: 12  STPP 1
           S PP
Sbjct: 380 SHPP 383



 Score = 26.2 bits (56), Expect(3) = 2e-09
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -3

Query: 233 AVHLHCDNMSAMYIAKNHV 177
           A  L+CDN SA++IA N V
Sbjct: 303 ATPLYCDNQSAIHIAHNDV 321



 Score = 24.3 bits (51), Expect(3) = 2e-09
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 310 KHNAMAQASSKVVWIVRLLTELGV 239
           ++ A+A  +S+++W+  LL +LGV
Sbjct: 275 EYRALADTTSELLWLRWLLKDLGV 298


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