BLASTX nr result

ID: Lithospermum22_contig00047555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047555
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40523.2| Mutator transposable element, putative [Solanum d...    71   1e-10
gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group...    69   3e-10
gb|ABI34394.1| Mutator transposable element-related protein, put...    69   4e-10
gb|EEC73151.1| hypothetical protein OsI_07183 [Oryza sativa Indi...    68   9e-10
ref|XP_002462032.1| hypothetical protein SORBIDRAFT_02g013090 [S...    67   2e-09

>gb|AAT40523.2| Mutator transposable element, putative [Solanum demissum]
          Length = 626

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 NMCEVFNSFILEARDKPILTLVAMVKDLIMVRIQVNRDKADKWK-GKLCPKPRLKLTQNV 53
           N CEVFN FIL+ARDKPI+ L+  ++ L+M RI   R+KA+KW    +CP  + KL + +
Sbjct: 445 NQCEVFNKFILDARDKPIVKLLETIRHLLMTRINSIREKAEKWNLNDICPTIKKKLAKTM 504

Query: 52  KDASACMPTKSDRAHFQ 2
           K A+  +P +S+  +++
Sbjct: 505 KKAANYIPQRSNMWNYE 521


>gb|AAR00617.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|108709800|gb|ABF97595.1| transposon protein,
           putative, Mutator sub-class [Oryza sativa Japonica
           Group]
          Length = 981

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/76 (42%), Positives = 47/76 (61%)
 Frame = -3

Query: 229 NMCEVFNSFILEARDKPILTLVAMVKDLIMVRIQVNRDKADKWKGKLCPKPRLKLTQNVK 50
           N CEVFN +ILEAR+ PILT++  +K  +M R    + +A KW+G +CPK R KL +  +
Sbjct: 641 NSCEVFNKYILEAREMPILTMLEKIKGQLMTRFFNKQKEAQKWQGPICPKIRKKLLKIAE 700

Query: 49  DASACMPTKSDRAHFQ 2
            A+ C    + +  FQ
Sbjct: 701 QANICYVLPAGKGVFQ 716


>gb|ABI34394.1| Mutator transposable element-related protein, putative [Solanum
           tuberosum]
          Length = 616

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
 Frame = -3

Query: 229 NMCEVFNSFILEARDKPILTLVAMVKDLIMVRIQVNRDKADKWKGK-LCPKPRLKLTQNV 53
           N+CEVFNS I +ARDKPI+TL+  ++ L+M R+  NR+KA KW    +CPK +  L +N 
Sbjct: 133 NICEVFNSMIFDARDKPIVTLLEKLRYLLMARMLANREKAHKWSSNDVCPKIKDILHKNQ 192

Query: 52  KDASACMPTKSDRAHFQ 2
             A   +P KS++  ++
Sbjct: 193 TAAGEYIPRKSNQRKYE 209


>gb|EEC73151.1| hypothetical protein OsI_07183 [Oryza sativa Indica Group]
          Length = 388

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -3

Query: 229 NMCEVFNSFILEARDKPILTLVAMVKDLIMVRIQVNRDKADKWKGKLCPKPRLKLTQNVK 50
           N CEVFN +ILEAR+ PIL+++  +K  +M R    + +A+KW+G  CPK   KL +N +
Sbjct: 40  NSCEVFNKYILEARELPILSMLEKIKGQLMSRFYNKQKEAEKWEGPFCPKIGKKLLKNAE 99

Query: 49  DASACMPTKSDRAHFQ 2
            A+ C    + +  FQ
Sbjct: 100 HANICYVLPAGKGIFQ 115


>ref|XP_002462032.1| hypothetical protein SORBIDRAFT_02g013090 [Sorghum bicolor]
           gi|241925409|gb|EER98553.1| hypothetical protein
           SORBIDRAFT_02g013090 [Sorghum bicolor]
          Length = 849

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/66 (43%), Positives = 43/66 (65%)
 Frame = -3

Query: 229 NMCEVFNSFILEARDKPILTLVAMVKDLIMVRIQVNRDKADKWKGKLCPKPRLKLTQNVK 50
           NMCE FN  I+EAR  P++++   ++  +MVRIQ NR +ADKW G +CP    KL  N++
Sbjct: 529 NMCESFNHSIMEARFYPVISMCEAIRKKLMVRIQENRARADKWTGNICPNVFKKLKMNIE 588

Query: 49  DASACM 32
            +  C+
Sbjct: 589 LSGKCI 594


Top