BLASTX nr result
ID: Lithospermum22_contig00047548
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00047548
(442 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ... 147 7e-34
gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula] 147 7e-34
ref|XP_002521663.1| pentatricopeptide repeat-containing protein,... 145 4e-33
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi... 143 1e-32
gb|ABR17838.1| unknown [Picea sitchensis] 125 4e-27
>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 622
Score = 147 bits (372), Expect = 7e-34
Identities = 74/144 (51%), Positives = 99/144 (68%)
Frame = -3
Query: 434 GSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSI 255
G +K+GKEIHGYAFRRG DS S ALI+ Y EC ++L IF S +D+V+WSSI
Sbjct: 287 GFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSI 346
Query: 254 IKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSG 75
I SY++ + +++A+ LFN+M+ PN VT+LAVISAC+ LSS HGY++K G
Sbjct: 347 IGSYAR-RGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG 405
Query: 74 FRSLIFIQNSLINMYSKCGSLSDA 3
IF+ N+LINMY+KCGSL D+
Sbjct: 406 IGFSIFVCNALINMYAKCGSLDDS 429
Score = 74.3 bits (181), Expect = 9e-12
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = -3
Query: 419 GKEIHGYAFRRG---MDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSIIK 249
G++IHG G + LS+A + Y C ++L R +F + K+ V W+++I
Sbjct: 188 GRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMA-RSVFDEMEVKNEVSWTAVIS 246
Query: 248 SYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGFR 69
+ +++ + A+ + MQ+ G+ PN VT++A+++AC++ + + HGY + GF
Sbjct: 247 GCANNQD-YDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFD 305
Query: 68 SLIFIQNSLINMYSKCG 18
S +LI +Y +CG
Sbjct: 306 SCHSFSPALIYLYCECG 322
Score = 72.4 bits (176), Expect = 4e-11
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Frame = -3
Query: 437 IGSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSS 258
+ S KHG IHGY + G+ + +ALI+ Y++C +L R IF +D V W+S
Sbjct: 388 LSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKC-GSLDDSRKIFLEMPSRDSVTWNS 446
Query: 257 IIKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKS 78
+I +Y G E+A+ F M+ G++ + VT LAV+SAC+ + + Q V +
Sbjct: 447 MISAYGLHGYG-EQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQV-NA 504
Query: 77 GFRSLIFIQN--SLINMYSKCGSLSDA 3
I I++ LI+++ + G L DA
Sbjct: 505 DCEIPITIEHYACLIDLHGRSGKLEDA 531
>gb|ABN05862.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 460
Score = 147 bits (372), Expect = 7e-34
Identities = 74/144 (51%), Positives = 99/144 (68%)
Frame = -3
Query: 434 GSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSI 255
G +K+GKEIHGYAFRRG DS S ALI+ Y EC ++L IF S +D+V+WSSI
Sbjct: 287 GFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSI 346
Query: 254 IKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSG 75
I SY++ + +++A+ LFN+M+ PN VT+LAVISAC+ LSS HGY++K G
Sbjct: 347 IGSYAR-RGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFG 405
Query: 74 FRSLIFIQNSLINMYSKCGSLSDA 3
IF+ N+LINMY+KCGSL D+
Sbjct: 406 IGFSIFVCNALINMYAKCGSLDDS 429
Score = 74.3 bits (181), Expect = 9e-12
Identities = 39/137 (28%), Positives = 74/137 (54%), Gaps = 3/137 (2%)
Frame = -3
Query: 419 GKEIHGYAFRRG---MDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSIIK 249
G++IHG G + LS+A + Y C ++L R +F + K+ V W+++I
Sbjct: 188 GRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMA-RSVFDEMEVKNEVSWTAVIS 246
Query: 248 SYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGFR 69
+ +++ + A+ + MQ+ G+ PN VT++A+++AC++ + + HGY + GF
Sbjct: 247 GCANNQD-YDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFD 305
Query: 68 SLIFIQNSLINMYSKCG 18
S +LI +Y +CG
Sbjct: 306 SCHSFSPALIYLYCECG 322
>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 578
Score = 145 bits (365), Expect = 4e-33
Identities = 73/141 (51%), Positives = 92/141 (65%)
Frame = -3
Query: 440 EIGSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWS 261
E+G K GKEIHGYAFR G D D S+LIH Y +E L+ +L F RS KD+VMWS
Sbjct: 241 ELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWS 300
Query: 260 SIIKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIK 81
SII SY +S + EA+ LF M+ G PN VT+LAVI+AC+ L+S+ HGY++K
Sbjct: 301 SIIGSYCRSADSI-EALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVK 359
Query: 80 SGFRSLIFIQNSLINMYSKCG 18
G +I N+LINMYSKCG
Sbjct: 360 CGLNFDTYIGNALINMYSKCG 380
Score = 82.4 bits (202), Expect = 3e-14
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 1/144 (0%)
Frame = -3
Query: 431 SIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSII 252
S+K+G HGY + G++ D + +ALI+ YS+C + + + IF KD V WS++I
Sbjct: 346 SLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQ-IFKEMHIKDSVSWSTLI 404
Query: 251 KSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGF 72
+Y +G +EA+ LF+ MQ+ G+ P+ +T LAV+SAC+ + + Q V K G
Sbjct: 405 TAYGLHGHG-KEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGK 463
Query: 71 RSLIFIQNS-LINMYSKCGSLSDA 3
SL + L+++ K G + DA
Sbjct: 464 VSLTVEHYACLVDLLGKSGKVDDA 487
Score = 67.8 bits (164), Expect = 9e-10
Identities = 38/139 (27%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = -3
Query: 437 IGSIKHGKEIHGYAFRRG-MDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWS 261
+G +K G+ IH G + + + ++L+ Y + ++L +R +F + + K++V W+
Sbjct: 140 LGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALR-VFDQIEVKNVVSWT 198
Query: 260 SIIKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIK 81
+++ S + + A+ F MQI G+RPN VT++A++ A ++L + HGY +
Sbjct: 199 ALVSGCSANLD-YNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFR 257
Query: 80 SGFRSLIFIQNSLINMYSK 24
GF +SLI++Y +
Sbjct: 258 HGFDLDHHFLSSLIHIYCR 276
Score = 57.8 bits (138), Expect = 9e-07
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Frame = -3
Query: 419 GKEIHGYAFRRGMDSDFRLSSALIHTY--SECKE-ALRTIRLIFTRSKKKDIVMWSSIIK 249
G +++ + G+DSDF + ++ I Y S C E AL+ +F KD + W+ II
Sbjct: 45 GIQLYSIVLKSGLDSDFVICNSFISFYAKSSCTESALK----VFDTMPLKDPISWNCIIN 100
Query: 248 SYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSG-F 72
Y Q+ T + +F M GI P + +V+S C +L + + H V+ G
Sbjct: 101 GYFQNGYFT-QGFIMFKEMYECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRI 159
Query: 71 RSLIFIQNSLINMYSKCG 18
IF+ SL++ Y K G
Sbjct: 160 AKEIFVLTSLVDWYFKSG 177
>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 143 bits (361), Expect = 1e-32
Identities = 73/144 (50%), Positives = 98/144 (68%)
Frame = -3
Query: 440 EIGSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWS 261
E G +KHGKEIHGYAFR G +S SSAL++ Y +C E + LIF S +D+V+WS
Sbjct: 266 EPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWS 325
Query: 260 SIIKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIK 81
SII S+S+ + + +A+ LFN+M+ I PN VT+LAVISAC+ LSS+ HGY+ K
Sbjct: 326 SIIGSFSR-RGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFK 384
Query: 80 SGFRSLIFIQNSLINMYSKCGSLS 9
GF I + N+LINMY+KCG L+
Sbjct: 385 FGFCFSISVGNALINMYAKCGCLN 408
Score = 80.5 bits (197), Expect = 1e-13
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = -3
Query: 425 KHGKEIHGYAF-RRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSIIK 249
K G++IH + LS+AL+ Y C ++L +R +F + K++V W+++I
Sbjct: 169 KIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALR-VFDGMEVKNVVSWTTMIS 227
Query: 248 SYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGFR 69
++ +EA F MQ G+ PN VT +A++SAC++ + + HGY + GF
Sbjct: 228 GCIAHQD-YDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFE 286
Query: 68 SLIFIQNSLINMYSKCG 18
S ++L+NMY +CG
Sbjct: 287 SCPSFSSALVNMYCQCG 303
Score = 74.3 bits (181), Expect = 9e-12
Identities = 39/111 (35%), Positives = 63/111 (56%)
Frame = -3
Query: 437 IGSIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSS 258
+ S+KHG +HGY F+ G + +ALI+ Y++C L R +F +D V WSS
Sbjct: 369 LSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCG-CLNGSRKMFLEMPNRDNVTWSS 427
Query: 257 IIKSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQ 105
+I +Y G E+A+ +F M G++P+ +T LAV+SAC+ + + Q
Sbjct: 428 LISAYGLHGCG-EQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQ 477
Score = 54.7 bits (130), Expect = 8e-06
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Frame = -3
Query: 419 GKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSIIKSYS 240
G ++H A + G S+ +S+++I Y + + + + R +F +D + W+S+I Y
Sbjct: 70 GTQLHCLALKTGSHSETVVSNSIITMYFKFSD-VGSARQVFDTMPHRDPITWNSLINGYL 128
Query: 239 QSKNG-TEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHG-YVIKSGFRS 66
NG EEA+ N + + G+ P + +V+S C + + H V+
Sbjct: 129 H--NGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQ 186
Query: 65 LIFIQNSLINMYSKCG 18
+F+ +L++ Y +CG
Sbjct: 187 SMFLSTALVDFYFRCG 202
>gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 125 bits (314), Expect = 4e-27
Identities = 58/143 (40%), Positives = 95/143 (66%)
Frame = -3
Query: 431 SIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSII 252
+++ GK+IH YA R G++SD + + L++ Y++C + T +F R +D+ W++II
Sbjct: 236 ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGN-VNTAHKLFERMPIRDVASWNAII 294
Query: 251 KSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGF 72
YS + EA+ FNRMQ+ GI+PN +TM++V+ AC+ L ++ Q Q HGY I+SGF
Sbjct: 295 GGYSLNSQH-HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF 353
Query: 71 RSLIFIQNSLINMYSKCGSLSDA 3
S + N+L+NMY+KCG+++ A
Sbjct: 354 ESNDVVGNALVNMYAKCGNVNSA 376
Score = 112 bits (281), Expect = 2e-23
Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Frame = -3
Query: 428 IKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSIIK 249
++ G+++H RG +SD + +AL Y++C +L R +F R K+D+V W++II
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCG-SLENARQVFDRMPKRDVVSWNAIIA 194
Query: 248 SYSQSKNGTE-EAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGF 72
YSQ NG EA+ LF+ MQ+ GI+PN T+++V+ C+ L ++ Q + H Y I+SG
Sbjct: 195 GYSQ--NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252
Query: 71 RSLIFIQNSLINMYSKCGSLSDA 3
S + + N L+NMY+KCG+++ A
Sbjct: 253 ESDVLVVNGLVNMYAKCGNVNTA 275
Score = 111 bits (278), Expect = 5e-23
Identities = 52/143 (36%), Positives = 92/143 (64%)
Frame = -3
Query: 431 SIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSII 252
+++ G++IHGYA R G +S+ + +AL++ Y++C +L F R KK++V W++II
Sbjct: 337 ALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKL-FERMPKKNVVAWNAII 395
Query: 251 KSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQAQNFHGYVIKSGF 72
YSQ + EA+ LF MQ GI+P+ +++V+ AC+ ++ Q + HGY I+SGF
Sbjct: 396 SGYSQHGH-PHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 71 RSLIFIQNSLINMYSKCGSLSDA 3
S + + L+++Y+KCG+++ A
Sbjct: 455 ESNVVVGTGLVDIYAKCGNVNTA 477
Score = 73.9 bits (180), Expect = 1e-11
Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 1/144 (0%)
Frame = -3
Query: 431 SIKHGKEIHGYAFRRGMDSDFRLSSALIHTYSECKEALRTIRLIFTRSKKKDIVMWSSII 252
+++ GK+IHGY R G +S+ + + L+ Y++C + T + +F R ++D+V W+++I
Sbjct: 438 ALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGN-VNTAQKLFERMPEQDVVSWTTMI 496
Query: 251 KSYSQSKNGTEEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQA-QNFHGYVIKSG 75
+Y +G E+A+ LF++MQ G + + + A+++ACS ++Q Q F G
Sbjct: 497 LAYGIHGHG-EDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYG 555
Query: 74 FRSLIFIQNSLINMYSKCGSLSDA 3
+ L+++ + G L +A
Sbjct: 556 LAPKLEHYACLVDLLGRAGHLDEA 579
Score = 63.5 bits (153), Expect = 2e-08
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = -3
Query: 284 KKDIVMWSSIIKSYSQSKNGT-EEAMHLFNRMQIGGIRPNDVTMLAVISACSKLSSINQA 108
+ + V+W I Y KNG +A+ L+ +MQ GI P+ + L+VI AC S +
Sbjct: 82 RNNAVVWKETIIGYV--KNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAG 139
Query: 107 QNFHGYVIKSGFRSLIFIQNSLINMYSKCGSLSDA 3
+ H +I GF S + + +L +MY+KCGSL +A
Sbjct: 140 RKVHEDIIARGFESDVIVGTALASMYTKCGSLENA 174