BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047536
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   99   2e-37
gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca]          87   1e-26
emb|CAN67041.1| hypothetical protein VITISV_030416 [Vitis vinifera]    80   4e-26
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            75   1e-25
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       79   6e-25

>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 99.0 bits (245), Expect(2) = 2e-37
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = -1

Query: 193  KDCKPISTPLPINLKSSSSMCPSNEEERKEMSHVPYASAVGSLIFAMICTRPDIAQVVGA 14
            +D  PISTPLP+N K SSSM PS+E ER EMS VPYASAVGSL++AMICTRPDIAQ VG 
Sbjct: 1053 QDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGT 1112

Query: 13   VSRY 2
            VSR+
Sbjct: 1113 VSRF 1116



 Score = 82.0 bits (201), Expect(2) = 2e-37
 Identities = 36/43 (83%), Positives = 41/43 (95%)
 Frame = -2

Query: 321  DMKDLGPANKILGIQIHRDKNNKKIWLSQKNYLNKILRRFNMQ 193
            DMKDLGPANKILG+QIHRD+ ++KIWLSQKNYL K+LRRFNMQ
Sbjct: 1011 DMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQ 1053


>gb|AAF65309.1|AF229252_1 reverse transcriptase [Picea glauca]
          Length = 542

 Score = 86.7 bits (213), Expect(2) = 1e-26
 Identities = 37/61 (60%), Positives = 48/61 (78%)
 Frame = -1

Query: 184 KPISTPLPINLKSSSSMCPSNEEERKEMSHVPYASAVGSLIFAMICTRPDIAQVVGAVSR 5
           KP+  P+PI +  S+  CP  +EE ++MSHVPYASAVGSL++AM+CTRPDIA  VG +SR
Sbjct: 338 KPVKVPIPIGVNLSADQCPKIQEEEEDMSHVPYASAVGSLMYAMVCTRPDIAHAVGFLSR 397

Query: 4   Y 2
           Y
Sbjct: 398 Y 398



 Score = 58.2 bits (139), Expect(2) = 1e-26
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = -2

Query: 321 DMKDLGPANKILGIQIHRDKNNKKIWLSQKNYLNKILRRFNM 196
           DMKDLG AN ILG+ I RD+ N+K+WL+Q+ Y+  IL+RFN+
Sbjct: 293 DMKDLGAANFILGMDIKRDRANRKLWLNQRKYVETILQRFNI 334


>emb|CAN67041.1| hypothetical protein VITISV_030416 [Vitis vinifera]
          Length = 509

 Score = 80.1 bits (196), Expect(2) = 4e-26
 Identities = 38/61 (62%), Positives = 49/61 (80%)
 Frame = -1

Query: 184 KPISTPLPINLKSSSSMCPSNEEERKEMSHVPYASAVGSLIFAMICTRPDIAQVVGAVSR 5
           KP+S+PL  +LK SS   PS+E+E+KEM  VPYAS VGSL++A++CTR DIA VVG VSR
Sbjct: 441 KPVSSPLRSHLKLSSKQSPSSEKEKKEMRKVPYASVVGSLMYAIVCTRLDIAHVVGVVSR 500

Query: 4   Y 2
           +
Sbjct: 501 F 501



 Score = 62.8 bits (151), Expect(2) = 4e-26
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -2

Query: 321 DMKDLGPANKILGIQIHRDKNNKKIWLSQKNYLNKILRRFNMQKIVSQFLPL 166
           +MKDLG A++ILGI+I RD+ N K+WLSQK+Y+ K+L +FNM K      PL
Sbjct: 396 EMKDLGSASQILGIKISRDRTNGKLWLSQKSYIEKVLDKFNMGKAKPVSSPL 447


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 75.5 bits (184), Expect(2) = 1e-25
 Identities = 33/61 (54%), Positives = 46/61 (75%)
 Frame = -1

Query: 184  KPISTPLPINLKSSSSMCPSNEEERKEMSHVPYASAVGSLIFAMICTRPDIAQVVGAVSR 5
            K +S PL  + + S+   PS ++ER++M  +PYASAVGSL++AM+CTRPDIA  VG VSR
Sbjct: 1080 KAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSR 1139

Query: 4    Y 2
            +
Sbjct: 1140 F 1140



 Score = 65.9 bits (159), Expect(2) = 1e-25
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = -2

Query: 318  MKDLGPANKILGIQIHRDKNNKKIWLSQKNYLNKILRRFNMQKIVSQFLPL 166
            MKDLGPA +ILG++I RD+  KK+WLSQ+ Y+ K+L+RFNM+K  +   PL
Sbjct: 1036 MKDLGPAKQILGMRIMRDREAKKLWLSQEKYIEKVLQRFNMEKTKAVSCPL 1086


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 79.0 bits (193), Expect(2) = 6e-25
 Identities = 36/64 (56%), Positives = 48/64 (75%)
 Frame = -1

Query: 193  KDCKPISTPLPINLKSSSSMCPSNEEERKEMSHVPYASAVGSLIFAMICTRPDIAQVVGA 14
            ++ K +STPL  + K S+   PS E E+ +M  +PYASAVGSL++AM+CTRPDIA VVG 
Sbjct: 1020 ENAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIAHVVGT 1079

Query: 13   VSRY 2
            VSR+
Sbjct: 1080 VSRF 1083



 Score = 60.1 bits (144), Expect(2) = 6e-25
 Identities = 27/48 (56%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = -2

Query: 318  MKDLGPANKILGIQIHRDKNNKKIWLSQKNYLNKILRRFNMQ--KIVS 181
            MKD+G A +ILGI+I RD+  KK+WLSQ+NY+ ++L+RF M+  K+VS
Sbjct: 979  MKDMGAAKQILGIRIMRDRQEKKLWLSQENYVKRVLQRFQMENAKVVS 1026