BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047496
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]                57   2e-12
gb|AFH01598.1| hypothetical chloroplast RF19 (chloroplast) [Nelu...    51   1e-10
gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelu...    51   1e-10
ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucife...    51   1e-10
ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]...    51   1e-10

>gb|ADD30905.1| putative RF1 protein [Ehretia acuminata]
          Length = 1814

 Score = 57.0 bits (136), Expect(2) = 2e-12
 Identities = 31/58 (53%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = +3

Query: 75   EFFYSRVXXXXXXXXEEPLGQGDLGLNVKNQGNLGSVLSNQQKGIEE-YDAESNSKSK 245
            +FF S          EEP+ QGDLG NV+NQGN GSVL+NQQK IEE Y   +  K K
Sbjct: 1494 DFFISSNKKIKHRNQEEPIDQGDLGSNVQNQGNFGSVLANQQKDIEEDYVGSAMKKGK 1551



 Score = 39.7 bits (91), Expect(2) = 2e-12
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 1    LLLNSNKNENIGASANKNINEKQKRNFFI 87
            LLLN N+NEN+GA  NKNIN KQ+ +FFI
Sbjct: 1471 LLLNWNRNENVGA--NKNINGKQRVDFFI 1497


>gb|AFH01598.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo lutea]
          Length = 1839

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 126  PLGQGDLGLNVKNQGNLGSVLSNQQKGIEEYDAESNSKS 242
            P GQGDLG + +NQ NLGS+LSNQQ  ++EY AES+ K+
Sbjct: 1535 PPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 1    LLLNSNKNENIGASANKNINEKQKRNFFI 87
            LLLN N+NEN+  S NKNINEKQK++F I
Sbjct: 1486 LLLNWNRNENV--SENKNINEKQKKDFRI 1512


>gb|AFH01508.1| hypothetical chloroplast RF19 (chloroplast) [Nelumbo nucifera]
          Length = 1839

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 126  PLGQGDLGLNVKNQGNLGSVLSNQQKGIEEYDAESNSKS 242
            P GQGDLG + +NQ NLGS+LSNQQ  ++EY AES+ K+
Sbjct: 1535 PPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 1    LLLNSNKNENIGASANKNINEKQKRNFFI 87
            LLLN N+NEN+  S NKNINEKQK++F I
Sbjct: 1486 LLLNWNRNENV--SENKNINEKQKKDFRI 1512


>ref|YP_004564161.1| hypothetical chloroplast RF1 [Nelumbo nucifera]
            gi|224474281|gb|ACN49467.1| hypothetical chloroplast RF1
            [Nelumbo nucifera]
          Length = 1839

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 126  PLGQGDLGLNVKNQGNLGSVLSNQQKGIEEYDAESNSKS 242
            P GQGDLG + +NQ NLGS+LSNQQ  ++EY AES+ K+
Sbjct: 1535 PPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 1    LLLNSNKNENIGASANKNINEKQKRNFFI 87
            LLLN N+NEN+  S NKNINEKQK++F I
Sbjct: 1486 LLLNWNRNENV--SENKNINEKQKKDFRI 1512


>ref|YP_004563925.1| hypothetical chloroplast RF1 [Nelumbo lutea]
            gi|224474194|gb|ACN49383.1| hypothetical chloroplast RF1
            [Nelumbo lutea]
          Length = 1839

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 24/39 (61%), Positives = 31/39 (79%)
 Frame = +3

Query: 126  PLGQGDLGLNVKNQGNLGSVLSNQQKGIEEYDAESNSKS 242
            P GQGDLG + +NQ NLGS+LSNQQ  ++EY AES+ K+
Sbjct: 1535 PPGQGDLGPDAQNQENLGSILSNQQNDLKEYYAESDIKN 1573



 Score = 39.3 bits (90), Expect(2) = 1e-10
 Identities = 20/29 (68%), Positives = 24/29 (82%)
 Frame = +1

Query: 1    LLLNSNKNENIGASANKNINEKQKRNFFI 87
            LLLN N+NEN+  S NKNINEKQK++F I
Sbjct: 1486 LLLNWNRNENV--SENKNINEKQKKDFRI 1512