BLASTX nr result

ID: Lithospermum22_contig00047467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047467
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    70   1e-10
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/75 (46%), Positives = 56/75 (74%)
 Frame = -3

Query: 238 SSQIHTKLNPNMVYSVLVKIQSLNTINPRKVLDFFRFSNQLMGMPQKIESFSIVLLVLCN 59
           SS I +KLNP+++ +VL + Q     +P+++LDFF +S   MG+PQ ++SFSI+ + LCN
Sbjct: 60  SSHIPSKLNPDVIRAVLHQNQ---VGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCN 116

Query: 58  AKLYGLCNGVIDEMI 14
           ++L+GL NGV+ +MI
Sbjct: 117 SELFGLANGVLTQMI 131


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/75 (46%), Positives = 56/75 (74%)
 Frame = -3

Query: 238 SSQIHTKLNPNMVYSVLVKIQSLNTINPRKVLDFFRFSNQLMGMPQKIESFSIVLLVLCN 59
           SS I +KLNP+++ +VL + Q     +P+++LDFF +S   MG+PQ ++SFSI+ + LCN
Sbjct: 62  SSHIPSKLNPDVIRAVLHQNQ---VGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCN 118

Query: 58  AKLYGLCNGVIDEMI 14
           ++L+GL NGV+ +MI
Sbjct: 119 SELFGLANGVLTQMI 133


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 51/74 (68%)
 Frame = -3

Query: 229 IHTKLNPNMVYSVLVKIQSLNTINPRKVLDFFRFSNQLMGMPQKIESFSIVLLVLCNAKL 50
           +  KL+P++V+SV+ K       +P+++LDFF +    MG  QK++SFSI+ L+LCN++L
Sbjct: 61  VSNKLSPDVVHSVITK----QVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRL 116

Query: 49  YGLCNGVIDEMICM 8
           +   + V+++MI M
Sbjct: 117 FSRADSVVNQMIMM 130


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