BLASTX nr result

ID: Lithospermum22_contig00047385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047385
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|43780...   131   7e-29
emb|CAN70508.1| hypothetical protein VITISV_027902 [Vitis vinifera]   127   1e-27
emb|CAN70566.1| hypothetical protein VITISV_010970 [Vitis vinifera]   125   3e-27
emb|CAN75011.1| hypothetical protein VITISV_003559 [Vitis vinifera]   125   3e-27
emb|CAN73649.1| hypothetical protein VITISV_036843 [Vitis vinifera]   125   3e-27

>gb|AAD27571.1|AF114171_12 polyprotein [Sorghum bicolor] gi|4378066|gb|AAD19359.1| polyprotein
            [Sorghum bicolor]
          Length = 1877

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/132 (47%), Positives = 86/132 (65%)
 Frame = -3

Query: 398  FPFAMWGMNLVGKLPRAKGGVEFAIVAVDYFSK*VEAVPLKKTKGENLAHFLWKNILTRF 219
            +P   WGM+LVG +P A+GG +FA+VA++YF++ +EA PL     E +  F W+NI+ RF
Sbjct: 1597 WPLQRWGMDLVGPMPTAQGGNKFAVVAIEYFTRWIEAKPLTTITSETIRKFFWQNIVCRF 1656

Query: 218  GIPKVLVSDNGLQFEGHILADFCEKFGIKHRFAHVYYPQSNGQVKVMNRIIFNGIKKNLL 39
            G+P++L  DNG QF+     +FC   G K  FA VY+P+SNG V+  NR IF+ I K LL
Sbjct: 1657 GVPRLLTVDNGKQFDSDNFKEFCHLIGTKIAFASVYHPESNGAVERANRTIFSAISKTLL 1716

Query: 38   *SGKSGGDWVEE 3
               K  G WVEE
Sbjct: 1717 NLRK--GKWVEE 1726


>emb|CAN70508.1| hypothetical protein VITISV_027902 [Vitis vinifera]
          Length = 932

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/132 (44%), Positives = 86/132 (65%)
 Frame = -3

Query: 398  FPFAMWGMNLVGKLPRAKGGVEFAIVAVDYFSK*VEAVPLKKTKGENLAHFLWKNILTRF 219
            +PFA WGM++VG LP A    +F +VA DYFSK VEA      K +++  F+WKNI+ RF
Sbjct: 647  WPFAQWGMDIVGPLPAAPAQKKFLLVATDYFSKWVEAEAYASIKDKDVTKFVWKNIVCRF 706

Query: 218  GIPKVLVSDNGLQFEGHILADFCEKFGIKHRFAHVYYPQSNGQVKVMNRIIFNGIKKNLL 39
            GIP+++++DNG QF+     +FC +  I++ ++   YPQSNGQ K  N+ + N +KK L 
Sbjct: 707  GIPQIIIADNGPQFDSIAFRNFCSELSIRNSYSTPRYPQSNGQAKATNKTLINALKKRL- 765

Query: 38   *SGKSGGDWVEE 3
               ++ G WVEE
Sbjct: 766  --EQAKGKWVEE 775


>emb|CAN70566.1| hypothetical protein VITISV_010970 [Vitis vinifera]
          Length = 1027

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/132 (43%), Positives = 86/132 (65%)
 Frame = -3

Query: 398  FPFAMWGMNLVGKLPRAKGGVEFAIVAVDYFSK*VEAVPLKKTKGENLAHFLWKNILTRF 219
            +PFA WGM++VG LP A    +F +VA DYFSK VEA      K +++  F+WKNI+ RF
Sbjct: 742  WPFAQWGMDIVGPLPAAPAQKKFLLVATDYFSKWVEAEAYASIKDKDVTKFVWKNIVCRF 801

Query: 218  GIPKVLVSDNGLQFEGHILADFCEKFGIKHRFAHVYYPQSNGQVKVMNRIIFNGIKKNLL 39
            GIP+++++DNG QF+     +FC +  I++ ++   YPQSNGQ +  N+ + N +KK L 
Sbjct: 802  GIPQIIIADNGPQFDSIAFRNFCSELNIRNSYSTXRYPQSNGQAEATNKTLINALKKRL- 860

Query: 38   *SGKSGGDWVEE 3
               ++ G WVEE
Sbjct: 861  --EQAKGKWVEE 870


>emb|CAN75011.1| hypothetical protein VITISV_003559 [Vitis vinifera]
          Length = 984

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/132 (43%), Positives = 86/132 (65%)
 Frame = -3

Query: 398  FPFAMWGMNLVGKLPRAKGGVEFAIVAVDYFSK*VEAVPLKKTKGENLAHFLWKNILTRF 219
            +PFA WGM++VG LP A    +F +VA DYFSK VEA      K +++  F+WKNI+ RF
Sbjct: 699  WPFAQWGMDIVGPLPAAPAQKKFLLVATDYFSKWVEAEAYASIKDKDVTKFVWKNIVCRF 758

Query: 218  GIPKVLVSDNGLQFEGHILADFCEKFGIKHRFAHVYYPQSNGQVKVMNRIIFNGIKKNLL 39
            GIP+++++DNG QF+     +FC +  I++ ++   YPQSNGQ +  N+ + N +KK L 
Sbjct: 759  GIPQIIIADNGPQFDSMAFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINALKKRL- 817

Query: 38   *SGKSGGDWVEE 3
               ++ G WVEE
Sbjct: 818  --EQAKGKWVEE 827


>emb|CAN73649.1| hypothetical protein VITISV_036843 [Vitis vinifera]
          Length = 996

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/132 (43%), Positives = 85/132 (64%)
 Frame = -3

Query: 398  FPFAMWGMNLVGKLPRAKGGVEFAIVAVDYFSK*VEAVPLKKTKGENLAHFLWKNILTRF 219
            +PFA WGM++VG LP A    +F +VA DYFSK VEA      K  ++  F+WKNI+ RF
Sbjct: 711  WPFAQWGMDIVGPLPAAPAQKKFLLVATDYFSKWVEAEAYASIKDRDVTKFVWKNIICRF 770

Query: 218  GIPKVLVSDNGLQFEGHILADFCEKFGIKHRFAHVYYPQSNGQVKVMNRIIFNGIKKNLL 39
            GIP+ +++DNG QF+  +  +FC +  I++ ++   YPQSNGQ +  N+ + N +KK L 
Sbjct: 771  GIPQTIIADNGPQFDSIVFRNFCSELNIRNSYSTPRYPQSNGQAEATNKTLINALKKRL- 829

Query: 38   *SGKSGGDWVEE 3
               ++ G WVEE
Sbjct: 830  --EQAKGKWVEE 839


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