BLASTX nr result

ID: Lithospermum22_contig00047346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047346
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat...    57   1e-06
ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat...    56   3e-06

>ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Vitis vinifera]
          Length = 670

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/47 (51%), Positives = 32/47 (68%)
 Frame = +1

Query: 7   EKEVKKTTGCSWIHIGERVHTFTSSDRSHSEIDAIYFVISCLIQELD 147
           E E+KK  GCSW+++  RVH FTS D SHS  +AIY ++  L  EL+
Sbjct: 620 ENEIKKFAGCSWVYVENRVHIFTSGDSSHSSAEAIYSILLILTAELN 666


>ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g18840-like [Glycine max]
          Length = 681

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/59 (44%), Positives = 38/59 (64%)
 Frame = +1

Query: 13  EVKKTTGCSWIHIGERVHTFTSSDRSHSEIDAIYFVISCLIQELDAIRLTEERILEESQ 189
           E KK  GCSWI++   +H FTS DRSHS+ +A+Y  ++CL  +L  +   E++ L E Q
Sbjct: 619 EAKKLAGCSWIYVENGIHVFTSGDRSHSKAEAVYSTLTCLNGKL-YLSFKEQKQLYEIQ 676


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