BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047328
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521663.1| pentatricopeptide repeat-containing protein,...    99   3e-19
ref|XP_003593286.1| Pentatricopeptide repeat-containing protein ...    94   1e-17
ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15
sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-c...    80   2e-13
ref|NP_194836.1| pentatricopeptide repeat-containing protein [Ar...    80   2e-13

>ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539054|gb|EEF40650.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 578

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +3

Query: 3   KLEDVIDIVRKMPIKPSTKVWSSLVSACKLHERMEIAETLARELIKEEPDNDTNYKLLSM 182
           K++D  DI+R MP+KPST +WSSLVSACK+H R+EIAE LA+ELIK EP N  N+ LLSM
Sbjct: 483 KVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSM 542

Query: 183 VKAERDNWHGVQKV 224
           + AE  NW  V+ V
Sbjct: 543 IYAESGNWFAVEDV 556


>ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482334|gb|AES63537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 622

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/74 (54%), Positives = 60/74 (81%)
 Frame = +3

Query: 3   KLEDVIDIVRKMPIKPSTKVWSSLVSACKLHERMEIAETLARELIKEEPDNDTNYKLLSM 182
           KLED ++I+R MP+KPS ++WSSLVS+CKLH R++IAE+L+ +LI+ EP+N  +Y LLSM
Sbjct: 527 KLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSM 586

Query: 183 VKAERDNWHGVQKV 224
           + AE+  W  +++V
Sbjct: 587 IHAEKGRWLDIEQV 600


>ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = +3

Query: 3   KLEDVIDIVRKMPIKPSTKVWSSLVSACKLHERMEIAETLARELIKEEPDNDTNYKLLSM 182
           KLE  ++I R MP+KPS ++WSSLVSACKLH R++IAE LA +LI+ EP+N  NY LL+ 
Sbjct: 508 KLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSEPNNAGNYTLLNT 567

Query: 183 VKAERDNWHGVQKV 224
           + AE  +W   ++V
Sbjct: 568 IYAEHGHWLDTEQV 581


>sp|O65543.2|PP343_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31070, mitochondrial; Flags: Precursor
          Length = 624

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   KLEDVIDIVRKMPIKPSTKVWSSLVSACKLHERMEIA-ETLARELIKEEPDNDTNYKLLS 179
           K++D  ++   MP+KPS ++WSSL+SAC+ H R+++A + +A EL+K EPDN  NY LLS
Sbjct: 515 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 574

Query: 180 MVKAERDNWHGVQKV 224
            +  E  N+H  ++V
Sbjct: 575 KIHTESGNYHAAEEV 589


>ref|NP_194836.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|2980759|emb|CAA18186.1| putative protein [Arabidopsis
           thaliana] gi|7270009|emb|CAB79825.1| putative protein
           [Arabidopsis thaliana] gi|332660453|gb|AEE85853.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 613

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/75 (45%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   KLEDVIDIVRKMPIKPSTKVWSSLVSACKLHERMEIA-ETLARELIKEEPDNDTNYKLLS 179
           K++D  ++   MP+KPS ++WSSL+SAC+ H R+++A + +A EL+K EPDN  NY LLS
Sbjct: 504 KIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLS 563

Query: 180 MVKAERDNWHGVQKV 224
            +  E  N+H  ++V
Sbjct: 564 KIHTESGNYHAAEEV 578