BLASTX nr result

ID: Lithospermum22_contig00047325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047325
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_003627527.1| Pentatricopeptide repeat-containing protein ...   200   1e-49

>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/120 (78%), Positives = 106/120 (88%)
 Frame = -2

Query: 363 LACTHGGMVKRGRELFKSMEARFSVTPKLEHYGCMVDLLGRAGELEEAYNLIQRMPMKPD 184
           LACTHGG+V +G +LF+SME  FS+ PKLEHYGCMVDLLGRAGEL+EAY+L++ MPMKPD
Sbjct: 253 LACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPD 312

Query: 183 SVIWGTLLGACSFHGNVEFAEIAAEHLFDLEPRNPGNYVILSNIYARKARWDGVAKMRKI 4
           SVIWGTLLGACSFH NVEFAEIAAE LF +EP NPGNYVIL NIYA   RWDGVAK+RK+
Sbjct: 313 SVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQRWDGVAKLRKL 372


>ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 512

 Score =  202 bits (514), Expect = 2e-50
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = -2

Query: 363 LACTHGGMVKRGRELFKSMEARFSVTPKLEHYGCMVDLLGRAGELEEAYNLIQRMPMKPD 184
           LACTHGGMV  GR+LF+SME++F V PKLEHYGC+VDLLGRAGEL+EAYNLIQ MPM PD
Sbjct: 325 LACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPD 384

Query: 183 SVIWGTLLGACSFHGNVEFAEIAAEHLFDLEPRNPGNYVILSNIYARKARWDGVAKMRKI 4
           SVIWGTLLGACSFHGNVE  E+AAE LF LEP NPGNYVILSNIYA    W GVA++RK+
Sbjct: 385 SVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKM 444


>ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Cucumis sativus]
          Length = 589

 Score =  202 bits (514), Expect = 2e-50
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = -2

Query: 363 LACTHGGMVKRGRELFKSMEARFSVTPKLEHYGCMVDLLGRAGELEEAYNLIQRMPMKPD 184
           LACTHGGMV  GR+LF+SME++F V PKLEHYGC+VDLLGRAGEL+EAYNLIQ MPM PD
Sbjct: 325 LACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPD 384

Query: 183 SVIWGTLLGACSFHGNVEFAEIAAEHLFDLEPRNPGNYVILSNIYARKARWDGVAKMRKI 4
           SVIWGTLLGACSFHGNVE  E+AAE LF LEP NPGNYVILSNIYA    W GVA++RK+
Sbjct: 385 SVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKM 444


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  202 bits (514), Expect = 2e-50
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = -2

Query: 363 LACTHGGMVKRGRELFKSMEARFSVTPKLEHYGCMVDLLGRAGELEEAYNLIQRMPMKPD 184
           LACTHGGMV++GR +FKSM   F++ PKLEHYGCMVDLLGRAG+L EAY +IQRMPMKPD
Sbjct: 326 LACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPD 385

Query: 183 SVIWGTLLGACSFHGNVEFAEIAAEHLFDLEPRNPGNYVILSNIYARKARWDGVAKMRKI 4
           SVIWG LLGACSFH NVE AEIAAE LF LEP NPGNYVILSNIYA   +WDGVAK+RK+
Sbjct: 386 SVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKV 445


>ref|XP_003627527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355521549|gb|AET02003.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  200 bits (508), Expect = 1e-49
 Identities = 92/120 (76%), Positives = 105/120 (87%)
 Frame = -2

Query: 363 LACTHGGMVKRGRELFKSMEARFSVTPKLEHYGCMVDLLGRAGELEEAYNLIQRMPMKPD 184
           LACTHGGMV++G+ +F+SM   F++ PKLEHYGCMVDLLGRAG L EAY +I+RMPMKPD
Sbjct: 366 LACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPD 425

Query: 183 SVIWGTLLGACSFHGNVEFAEIAAEHLFDLEPRNPGNYVILSNIYARKARWDGVAKMRKI 4
           SVIWGTLLGACSFHGNVE AE+AAE LF LEP NPGNYVILSNIYA   +WDGVAK+RK+
Sbjct: 426 SVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLRKV 485


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