BLASTX nr result

ID: Lithospermum22_contig00047287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047287
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    78   9e-13
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11

>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/86 (48%), Positives = 57/86 (66%)
 Frame = -2

Query: 259 KDVDFYPXXXXXXXXXXXXXXXNRMDLFWKVYEGMVDRKMDIDIYTYNTVISAHCKVGNV 80
           K+ +F P               N+++LFWKV++GM   K+  D+YTY  +ISAHCKVGNV
Sbjct: 172 KNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNV 231

Query: 79  DESKNMLSKMGEKGCFPNAVTYNVVI 2
            ++K +L +MGEKGC PN VTYNV+I
Sbjct: 232 KDAKRVLLEMGEKGCSPNLVTYNVII 257


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/63 (55%), Positives = 49/63 (77%)
 Frame = -2

Query: 190 RMDLFWKVYEGMVDRKMDIDIYTYNTVISAHCKVGNVDESKNMLSKMGEKGCFPNAVTYN 11
           R++LFWKVY+GM+   +  D+YTY  +I+A+C+VG V+E K++L  M EKGC PN VTY+
Sbjct: 213 RVELFWKVYKGMLGAIVP-DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271

Query: 10  VVI 2
           VVI
Sbjct: 272 VVI 274


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/63 (49%), Positives = 45/63 (71%)
 Frame = -2

Query: 190 RMDLFWKVYEGMVDRKMDIDIYTYNTVISAHCKVGNVDESKNMLSKMGEKGCFPNAVTYN 11
           +++LFW+ Y GM++  +  D+YTY  +I+AH + GN  E K +L +M EKGC P+ VTYN
Sbjct: 216 KLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYN 275

Query: 10  VVI 2
           VVI
Sbjct: 276 VVI 278


>ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/62 (58%), Positives = 43/62 (69%)
 Frame = -2

Query: 187 MDLFWKVYEGMVDRKMDIDIYTYNTVISAHCKVGNVDESKNMLSKMGEKGCFPNAVTYNV 8
           M LFWKVY  MV+ K+  D+YTY  VI AHCKVG+V + K +LS+M EK C PN  TYN 
Sbjct: 223 MGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNA 281

Query: 7   VI 2
            I
Sbjct: 282 FI 283


>ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/62 (58%), Positives = 43/62 (69%)
 Frame = -2

Query: 187 MDLFWKVYEGMVDRKMDIDIYTYNTVISAHCKVGNVDESKNMLSKMGEKGCFPNAVTYNV 8
           M LFWKVY  MV+ K+  D+YTY  VI AHCKVG+V + K +LS+M EK C PN  TYN 
Sbjct: 223 MGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNA 281

Query: 7   VI 2
            I
Sbjct: 282 FI 283


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