BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047247
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago t...   152   2e-35
emb|CBI36977.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CBI35966.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   105   4e-21
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21

>ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355501015|gb|AES82218.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 607

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/117 (60%), Positives = 93/117 (79%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           +TL+NGY+KN ++++A   F++MSE++V SWTAMI G VQ+++F DA  LFV M K+E R
Sbjct: 207 TTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETR 266

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           PNH+TFSS LDAC+G SSLIMG Q+H CI+K G   DVI  TSL+DMYAKCGD++ A
Sbjct: 267 PNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAA 323



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 36/107 (33%), Positives = 57/107 (53%)
 Frame = +2

Query: 8   LINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVRPN 187
           ++  YL++N++      F++M  KD  SW  M+ G  ++R  E  +  F+ M ++ V PN
Sbjct: 46  VMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPN 105

Query: 188 HYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYA 328
            YT S+ L A       ++  QVHA    LG  L+V + +SLI  YA
Sbjct: 106 DYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYA 152


>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/117 (55%), Positives = 87/117 (74%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           +TL+NGY+ N +   A   F+ M+E++V SWT MI G VQ+ KF DA  LF+ M++S  +
Sbjct: 219 TTLVNGYIGNKKTSAARSVFDRMTERNVVSWTVMISGYVQNGKFVDALRLFLLMLRSGTQ 278

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
            NH+T SS L+AC+GCSSL++G QVH  +LK G P DVIL+TSL+DMYAKCGD+E A
Sbjct: 279 GNHFTLSSVLEACAGCSSLLLGKQVHLNVLKSGIPDDVILSTSLVDMYAKCGDIEAA 335



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/113 (28%), Positives = 61/113 (53%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           +T+I+ Y++N+E   A   F+EM ++D+ SW   + G  + +  E  +  F+ M +  ++
Sbjct: 56  NTIISAYIQNDEPHNAQNLFDEMPDRDIVSWNTALSGLKKIKNPEGVYLCFLKMRRVGLK 115

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGD 340
           PN +T S  + A       ++  Q+HA ++ LG    V + ++L+  YA  GD
Sbjct: 116 PNEFTLSIMISAILDTVFNVLTPQIHAVVVSLGFNSSVFVGSALMRGYAHVGD 168


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/118 (43%), Positives = 77/118 (65%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           + LI+ Y K  ++++AW  F+ +S K++ SW A+I GCVQ    E+A DL+  M    V+
Sbjct: 267 TALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVK 326

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETAC 355
           PN  T  + L AC+G  +L +G +VH  + + G  L+VILAT+L+DMYAKCG ++ AC
Sbjct: 327 PNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDAC 384



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMS-EKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKS-- 172
           +++I+GY++  ++++A   F EM   ++V  WTAMI G  +   F +   LF  M+ S  
Sbjct: 163 NSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSAD 222

Query: 173 EVRPNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           EV+PN  T    L ACS   +  +G  +   I     PL+ IL T+LIDMY+KCGDVE A
Sbjct: 223 EVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKA 282



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/115 (31%), Positives = 65/115 (56%)
 Frame = +2

Query: 8   LINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVRPN 187
           LI   +  + +D A F  ++      FSW ++I+        +++  L++ M++S  +P+
Sbjct: 33  LIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPS 92

Query: 188 HYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           ++TF   L ACS   S++ G Q+H  +L+LG   D+ +  SLIDMY KC  +++A
Sbjct: 93  NFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSA 147


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/117 (38%), Positives = 75/117 (64%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           + L++ +++   L  AW+ F +MSE+DVFSW  ++ G  ++  F++A +L+  M+ +E+R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           PN YTF S L  C+G S +  G ++HA +++ G   DV +  +LI MY KCGD+  A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGC-VQSRKFEDAFDLFVAMMKSEV 178
           ++LI+ Y K   +D A   F  +S K+V SWT++I G  + +R FE    LF   MK  +
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL--LFFRQMKESM 496

Query: 179 RPNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCG 337
           +PN  T  S L AC+   +L+ G ++HA  L+ G   D  L  +++DMY +CG
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/117 (35%), Positives = 61/117 (52%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           ++LI  Y     L++A   F+ M  KDV SWTAMI   V  +    A + +  M    + 
Sbjct: 338 NSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGIL 397

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           P+  T  S L AC+    L +G ++H   +K G    VI++ SLIDMY+KC  V+ A
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNA 454



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/117 (29%), Positives = 59/117 (50%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           + LI  Y+K  ++  A   F++M ++D  SW AMI G  ++    +  +LF  M +  V 
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           P+  T ++   AC    +  +G  VH  ++K     D+ +  SLI MY+  G +E A
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEA 353


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  105 bits (262), Expect = 4e-21
 Identities = 45/117 (38%), Positives = 75/117 (64%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           + L++ +++   L  AW+ F +MSE+DVFSW  ++ G  ++  F++A +L+  M+ +E+R
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           PN YTF S L  C+G S +  G ++HA +++ G   DV +  +LI MY KCGD+  A
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNA 252



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 42/113 (37%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGC-VQSRKFEDAFDLFVAMMKSEV 178
           ++LI+ Y K   +D A   F  +S K+V SWT++I G  + +R FE    LF   MK  +
Sbjct: 439 NSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL--LFFRQMKESM 496

Query: 179 RPNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCG 337
           +PN  T  S L AC+   +L+ G ++HA  L+ G   D  L  +++DMY +CG
Sbjct: 497 KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/117 (35%), Positives = 61/117 (52%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           ++LI  Y     L++A   F+ M  KDV SWTAMI   V  +    A + +  M    + 
Sbjct: 338 NSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGIL 397

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           P+  T  S L AC+    L +G ++H   +K G    VI++ SLIDMY+KC  V+ A
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNA 454



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/117 (29%), Positives = 59/117 (50%)
 Frame = +2

Query: 2   STLINGYLKNNELDQAWFAFNEMSEKDVFSWTAMIKGCVQSRKFEDAFDLFVAMMKSEVR 181
           + LI  Y+K  ++  A   F++M ++D  SW AMI G  ++    +  +LF  M +  V 
Sbjct: 237 NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVD 296

Query: 182 PNHYTFSSALDACSGCSSLIMGNQVHACILKLGTPLDVILATSLIDMYAKCGDVETA 352
           P+  T ++   AC    +  +G  VH  ++K     D+ +  SLI MY+  G +E A
Sbjct: 297 PDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEA 353