BLASTX nr result

ID: Lithospermum22_contig00047135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047135
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308498.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002322844.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002308498.1| predicted protein [Populus trichocarpa] gi|222854474|gb|EEE92021.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
 Frame = +3

Query: 12  SRESKVDDQSLNSSN----EEHKNNGEDNEGIDNVDCSMALVPVDFPKTAELARDVVVHA 179
           S++SK DDQS +S      E   N G +++  D VD S+ALVP+  P + +     +V+ 
Sbjct: 192 SQDSKADDQSSSSIKASVAEMETNAGIESDNEDYVDDSLALVPMSLPASTKKNELKIVNR 251

Query: 180 ASVKEALDSLQQIKEKIQISMEQRRIVRVG 269
            SV E LD+L+  +E+IQ SME R ++RVG
Sbjct: 252 -SVIEVLDALRHAREQIQSSMENRHMIRVG 280


>ref|XP_002322844.1| predicted protein [Populus trichocarpa] gi|222867474|gb|EEF04605.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
 Frame = +3

Query: 12  SRESKVDDQSLNSSN----EEHKNNGEDNEGIDNVDCSMALVPVDFPKTAELARDVVVHA 179
           S++SK+DDQS  S      E  KN G +++    V+ S+ALVP+  P + + +   VV+ 
Sbjct: 208 SQDSKIDDQSSASIKASVVEMEKNAGNESDNEAYVNNSLALVPLSLPASTKKSELKVVNR 267

Query: 180 ASVKEALDSLQQIKEKIQISMEQRRIVRV 266
            SV E LD+L+  +E+IQ SME+R ++RV
Sbjct: 268 -SVIEVLDALRHAREQIQSSMERRHMIRV 295


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