BLASTX nr result

ID: Lithospermum22_contig00047106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047106
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS99719.1| At2g22620 [Arabidopsis thaliana] gi|51970438|dbj|...   119   3e-25
ref|NP_001189578.1| rhamnogalacturonate lyase-like protein [Arab...   119   3e-25
ref|NP_179847.1| rhamnogalacturonate lyase-like protein [Arabido...   119   3e-25
ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arab...   117   1e-24
ref|XP_002527229.1| lyase, putative [Ricinus communis] gi|223533...   117   1e-24

>gb|AAS99719.1| At2g22620 [Arabidopsis thaliana] gi|51970438|dbj|BAD43911.1|
           unknown protein [Arabidopsis thaliana]
          Length = 677

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   DYKYEKNVEIKSGSNMALGDLAYIPPRSGPTIWEIGISDRTAAEFFIPDPAPGF---IYT 173
           DYKYE+N+ I  GS M +G L Y PPR+GPT+WEIG+ DRTA EF+IPDP P     +Y 
Sbjct: 453 DYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYV 512

Query: 174 N-LNDKYRQYGLWDRYTDLYPKDDLV 248
           N L D++RQYGLWDRY DLYP++DLV
Sbjct: 513 NPLQDRFRQYGLWDRYADLYPQNDLV 538


>ref|NP_001189578.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|330252236|gb|AEC07330.1| rhamnogalacturonate
           lyase-like protein [Arabidopsis thaliana]
          Length = 597

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   DYKYEKNVEIKSGSNMALGDLAYIPPRSGPTIWEIGISDRTAAEFFIPDPAPGF---IYT 173
           DYKYE+N+ I  GS M +G L Y PPR+GPT+WEIG+ DRTA EF+IPDP P     +Y 
Sbjct: 373 DYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYV 432

Query: 174 N-LNDKYRQYGLWDRYTDLYPKDDLV 248
           N L D++RQYGLWDRY DLYP++DLV
Sbjct: 433 NPLQDRFRQYGLWDRYADLYPQNDLV 458


>ref|NP_179847.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|4314359|gb|AAD15570.1| unknown protein [Arabidopsis
           thaliana] gi|330252235|gb|AEC07329.1|
           rhamnogalacturonate lyase-like protein [Arabidopsis
           thaliana]
          Length = 677

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   DYKYEKNVEIKSGSNMALGDLAYIPPRSGPTIWEIGISDRTAAEFFIPDPAPGF---IYT 173
           DYKYE+N+ I  GS M +G L Y PPR+GPT+WEIG+ DRTA EF+IPDP P     +Y 
Sbjct: 453 DYKYEQNITITPGSEMNVGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYV 512

Query: 174 N-LNDKYRQYGLWDRYTDLYPKDDLV 248
           N L D++RQYGLWDRY DLYP++DLV
Sbjct: 513 NPLQDRFRQYGLWDRYADLYPQNDLV 538


>ref|XP_002880453.1| hypothetical protein ARALYDRAFT_481121 [Arabidopsis lyrata subsp.
           lyrata] gi|297326292|gb|EFH56712.1| hypothetical protein
           ARALYDRAFT_481121 [Arabidopsis lyrata subsp. lyrata]
          Length = 681

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/86 (61%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   DYKYEKNVEIKSGSNMALGDLAYIPPRSGPTIWEIGISDRTAAEFFIPDPAPGF---IYT 173
           DYKYE+N+ I  GS M +G + Y PPR+GPT+WEIG+ DRTA EF+IPDP P     +Y 
Sbjct: 457 DYKYEQNIIITPGSEMNVGPIVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYV 516

Query: 174 N-LNDKYRQYGLWDRYTDLYPKDDLV 248
           N L D++RQYGLWDRY DLYP++DLV
Sbjct: 517 NPLQDRFRQYGLWDRYADLYPQNDLV 542


>ref|XP_002527229.1| lyase, putative [Ricinus communis] gi|223533405|gb|EEF35155.1|
           lyase, putative [Ricinus communis]
          Length = 676

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   DYKYEKNVEIKSGSNMALGDLAYIPPRSGPTIWEIGISDRTAAEFFIPDPAPGF---IYT 173
           D+KY+ +V +K GS + LG L Y PPR+GPT+WEIGI DRTAAEFF+PD  P     +Y+
Sbjct: 447 DWKYDVDVLVKPGSEIELGVLVYKPPRNGPTLWEIGIPDRTAAEFFVPDTCPTLENKLYS 506

Query: 174 NLNDKYRQYGLWDRYTDLYPKDDLV 248
           N  DK+RQYGLWDRYTDLYP+ DL+
Sbjct: 507 NHPDKFRQYGLWDRYTDLYPEHDLI 531


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