BLASTX nr result

ID: Lithospermum22_contig00047083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047083
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...    71   8e-11
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...    70   2e-10
ref|NP_176514.1| putative DEAD-box ATP-dependent RNA helicase 48...    69   3e-10

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = -3

Query: 127 NKWQWKRMHQKKASQKEQRLLDQEKQIYQARIRSQMRANLS 5
           NKWQWKR+H+KKA +KE+RLLD EKQ+Y+ARIRSQ+RA L+
Sbjct: 38  NKWQWKRLHEKKAREKEKRLLDHEKQLYEARIRSQIRAKLA 78


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 29/41 (70%), Positives = 39/41 (95%)
 Frame = -3

Query: 127 NKWQWKRMHQKKASQKEQRLLDQEKQIYQARIRSQMRANLS 5
           NKWQWKR+H+KKA +KE+RLLDQEKQ++Q R+RSQ+R+NL+
Sbjct: 37  NKWQWKRLHEKKAKEKEKRLLDQEKQLFQDRMRSQIRSNLA 77


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/41 (70%), Positives = 38/41 (92%)
 Frame = -3

Query: 127 NKWQWKRMHQKKASQKEQRLLDQEKQIYQARIRSQMRANLS 5
           NKWQWKR+H+KKA +KE+RLLDQEKQ+YQAR+RS +R+ L+
Sbjct: 37  NKWQWKRLHEKKAKEKEKRLLDQEKQLYQARMRSNIRSKLA 77


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = -3

Query: 127 NKWQWKRMHQKKASQKEQRLLDQEKQIYQARIRSQMRANL 8
           NKWQWKRMH+K+A +KE+RLL+QEKQ+YQARIRS +R+ L
Sbjct: 38  NKWQWKRMHEKRAKEKEKRLLEQEKQLYQARIRSDIRSKL 77


>ref|NP_176514.1| putative DEAD-box ATP-dependent RNA helicase 48 [Arabidopsis
           thaliana] gi|75333533|sp|Q9C8S9.1|RH48_ARATH RecName:
           Full=Probable DEAD-box ATP-dependent RNA helicase 48
           gi|12324351|gb|AAG52143.1|AC022355_4 putative RNA
           helicase; 42376-45543 [Arabidopsis thaliana]
           gi|332195955|gb|AEE34076.1| putative DEAD-box
           ATP-dependent RNA helicase 48 [Arabidopsis thaliana]
          Length = 798

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 28/40 (70%), Positives = 37/40 (92%)
 Frame = -3

Query: 127 NKWQWKRMHQKKASQKEQRLLDQEKQIYQARIRSQMRANL 8
           NKWQWKRMH+KKA +KE +LLDQEKQ+Y+ARIR+++RA +
Sbjct: 38  NKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKM 77


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