BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047056
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   105   3e-21
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   103   1e-20
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   102   3e-20
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript...   101   7e-20
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...   101   7e-20

>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/101 (48%), Positives = 70/101 (69%)
 Frame = +1

Query: 4   VSIVSYSFLINGAPRGYICPTREIHQGDPLSPYIFLLCTEGLTCMLWDVEESHALSVVKV 183
           V  V Y  LING P G I P+R + QGDPLSPY+F++CTE L  ML   E+ + ++ +KV
Sbjct: 610 VKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKV 669

Query: 184 ARDCPSISHILFADDTMIFCRAVEKEWRKLIKILGEYEVAS 306
           AR  P ISH+LFADD+M +C+  ++   ++I+I+ EY +AS
Sbjct: 670 ARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYSLAS 710


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/101 (49%), Positives = 69/101 (68%)
 Frame = +1

Query: 4   VSIVSYSFLINGAPRGYICPTREIHQGDPLSPYIFLLCTEGLTCMLWDVEESHALSVVKV 183
           V  VSYSFLING+P+G + P+R + QGDPLSPY+F+LCTE L+ +    +E   +  ++V
Sbjct: 551 VCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRV 610

Query: 184 ARDCPSISHILFADDTMIFCRAVEKEWRKLIKILGEYEVAS 306
           AR  P ++H+LFADDTM FC+        L  IL +YE+AS
Sbjct: 611 ARGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELAS 651


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +1

Query: 4    VSIVSYSFLINGAPRGYICPTREIHQGDPLSPYIFLLCTEGLTCMLWDVEESHALSVVKV 183
            V+ VSY  LING+P G I P+R I QGDPLSPY+FL C E L+ ML   E +  +  +K+
Sbjct: 972  VTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKI 1031

Query: 184  ARDCPSISHILFADDTMIFCRAVEKEWRKLIKILGEYEVAS 306
             +DC +ISH+LFADD++ FCRA  +   +L  I  +YE AS
Sbjct: 1032 TKDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEAS 1072


>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 400

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/101 (46%), Positives = 70/101 (69%)
 Frame = +1

Query: 4   VSIVSYSFLINGAPRGYICPTREIHQGDPLSPYIFLLCTEGLTCMLWDVEESHALSVVKV 183
           +S VSY  L+NG+P+G+I P+R I QGDP+SP++F+LCTE L   L D E    +  +++
Sbjct: 191 ISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQI 250

Query: 184 ARDCPSISHILFADDTMIFCRAVEKEWRKLIKILGEYEVAS 306
           +R  PS SH+LFADD++ FC+A   + +++I IL  Y  AS
Sbjct: 251 SRASPSTSHLLFADDSLFFCKADPLQGKEIIDILRLYGEAS 291


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/101 (46%), Positives = 70/101 (69%)
 Frame = +1

Query: 4   VSIVSYSFLINGAPRGYICPTREIHQGDPLSPYIFLLCTEGLTCMLWDVEESHALSVVKV 183
           +S VSY  L+NG+P+G+I P+R I QGDP+SP++F+LCTE L   L D E    +  +++
Sbjct: 557 ISSVSYKILLNGSPKGFIKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGLQI 616

Query: 184 ARDCPSISHILFADDTMIFCRAVEKEWRKLIKILGEYEVAS 306
           +R  PS SH+LFADD++ FC+A   + +++I IL  Y  AS
Sbjct: 617 SRASPSTSHLLFADDSLFFCKADPLQGKEIIDILRLYGEAS 657