BLASTX nr result

ID: Lithospermum22_contig00047051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047051
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB71564.1| squamosa promoter binding protein-like protein [S...    77   1e-12
emb|CAB56568.1| squamosa promoter binding protein-homologue 3 [A...    76   3e-12
ref|XP_003626693.1| Squamosa promoter binding protein [Medicago ...    66   3e-09
gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula ...    64   2e-08
emb|CBI16614.3| unnamed protein product [Vitis vinifera]               63   3e-08

>gb|AEB71564.1| squamosa promoter binding protein-like protein [Solanum chacoense]
          Length = 293

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/72 (61%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SEFDNGKRSCRKRLADHNKRRRKSSHQQTNQENANKSQL-NXXXXXXXXXXXXXXXSGVQ 39
           SEFDNGKRSCRKRLADHN+RRRK  +QQ N EN+NKSQL +               SG  
Sbjct: 214 SEFDNGKRSCRKRLADHNRRRRK--NQQANLENSNKSQLDSTRNSPSHTLARSPADSGAH 271

Query: 38  TSSVTVAVSPPR 3
            SSVTVA+SPPR
Sbjct: 272 CSSVTVAISPPR 283


>emb|CAB56568.1| squamosa promoter binding protein-homologue 3 [Antirrhinum majus]
          Length = 305

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/76 (55%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
 Frame = -1

Query: 215 SEFDNGKRSCRKRLADHNKRRRKSSHQQTNQENANKSQLN-----XXXXXXXXXXXXXXX 51
           SEFDNGKRSCR+RLADHN+RRRKSS Q  +QEN+ KSQL                     
Sbjct: 199 SEFDNGKRSCRRRLADHNRRRRKSSQQANSQENSGKSQLQGNNAAAPNSSSENLPRSPPD 258

Query: 50  SGVQTSSVTVAVSPPR 3
           SG  +SSVT  VSPPR
Sbjct: 259 SGAHSSSVTAGVSPPR 274


>ref|XP_003626693.1| Squamosa promoter binding protein [Medicago truncatula]
           gi|355520715|gb|AET01169.1| Squamosa promoter binding
           protein [Medicago truncatula]
          Length = 327

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 39/71 (54%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
 Frame = -1

Query: 215 SEFDNGKRSCRKRLADHNKRRRKSSHQQTNQENANKSQLNXXXXXXXXXXXXXXXSGVQ- 39
           SEFDNGKRSCRKRLADHN+RRRK+ H  T   + + + L+               SG Q 
Sbjct: 238 SEFDNGKRSCRKRLADHNRRRRKTQHPNTQDIHKSHNTLD------SSATRSPPESGTQS 291

Query: 38  TSSVTVAVSPP 6
           TSSVTVAVSPP
Sbjct: 292 TSSVTVAVSPP 302


>gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula platyphylla]
          Length = 309

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/72 (54%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 SEFDNGKRSCRKRLADHNKRRRKSSHQQTNQENANKSQLNXXXXXXXXXXXXXXXSGV-Q 39
           SEFDNGKRSCRKRLADHN+RRRK     T+Q N  + +                 SG   
Sbjct: 215 SEFDNGKRSCRKRLADHNRRRRK-----THQPNPEQLKSQPDNARNPSSERSPPDSGAHS 269

Query: 38  TSSVTVAVSPPR 3
           TSSVTVAVSPPR
Sbjct: 270 TSSVTVAVSPPR 281


>emb|CBI16614.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/75 (56%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
 Frame = -1

Query: 215 SEFDNGKRSCRKRLADHNKRRRKSSHQQTNQENANKSQ---LNXXXXXXXXXXXXXXXSG 45
           SEFDNGKRSCRKRLADHN+RRRKS  QQ  Q+N    Q    N               SG
Sbjct: 288 SEFDNGKRSCRKRLADHNRRRRKS--QQPIQDNHKLHQHHLENARNSSSDNITRSPPDSG 345

Query: 44  V-QTSSVTVAVSPPR 3
              +SSVTVAVSPPR
Sbjct: 346 AHSSSSVTVAVSPPR 360


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