BLASTX nr result

ID: Lithospermum22_contig00047012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00047012
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...   111   7e-23
emb|CBI32139.3| unnamed protein product [Vitis vinifera]              111   7e-23
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    89   5e-16
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...    87   2e-15

>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2060

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
 Frame = -2

Query: 342 CSHDGSEMYTK-------KFINLGSLSKFSHSAVPNNIPYVIDGDVSFKATCETLVKWLG 184
           C HD  +++T           ++GSL+KF +   P NIP  I  D     +C+ L+KWL 
Sbjct: 391 CKHDLDQIWTPYATLNADAAASIGSLAKFCNFCGPINIPCCIQNDSVLDTSCDALIKWLD 450

Query: 183 EDRFGLDVEFVQEIIEHLPRVAACTEYKNLKERTENPTPQTVGSGFFVAQRNN 25
           +DRFGLDVEFVQEIIEHLP V AC+EY+ L  RT N TPQT  SGF +A+R +
Sbjct: 451 QDRFGLDVEFVQEIIEHLPGVHACSEYEFLNRRTHNSTPQTFRSGFLLAKRKS 503


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/113 (49%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
 Frame = -2

Query: 342 CSHDGSEMYTK-------KFINLGSLSKFSHSAVPNNIPYVIDGDVSFKATCETLVKWLG 184
           C HD  +++T           ++GSL+KF +   P NIP  I  D     +C+ L+KWL 
Sbjct: 258 CKHDLDQIWTPYATLNADAAASIGSLAKFCNFCGPINIPCCIQNDSVLDTSCDALIKWLD 317

Query: 183 EDRFGLDVEFVQEIIEHLPRVAACTEYKNLKERTENPTPQTVGSGFFVAQRNN 25
           +DRFGLDVEFVQEIIEHLP V AC+EY+ L  RT N TPQT  SGF +A+R +
Sbjct: 318 QDRFGLDVEFVQEIIEHLPGVHACSEYEFLNRRTHNSTPQTFRSGFLLAKRKS 370


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Vitis vinifera]
          Length = 2164

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/89 (49%), Positives = 57/89 (64%)
 Frame = -2

Query: 291 SLSKFSHSAVPNNIPYVIDGDVSFKATCETLVKWLGEDRFGLDVEFVQEIIEHLPRVAAC 112
           SL KF  S     +P VI G+   +  CE L KWL +DRFGLDVEFVQE++E LP V AC
Sbjct: 555 SLDKFCSSPGSVCMPSVIQGENELQTQCEVLAKWLDQDRFGLDVEFVQEMLEQLPGVCAC 614

Query: 111 TEYKNLKERTENPTPQTVGSGFFVAQRNN 25
           ++YK L  R+ + T  TVG+G  +A+  N
Sbjct: 615 SQYKLLNNRSYHSTLLTVGNGLLLAETEN 643


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/89 (49%), Positives = 57/89 (64%)
 Frame = -2

Query: 291 SLSKFSHSAVPNNIPYVIDGDVSFKATCETLVKWLGEDRFGLDVEFVQEIIEHLPRVAAC 112
           SL KF  S     +P VI G+   +  CE L KWL +DRFGLDVEFVQE++E LP V AC
Sbjct: 493 SLDKFCSSPGSVCMPSVIQGENELQTQCEVLAKWLDQDRFGLDVEFVQEMLEQLPGVCAC 552

Query: 111 TEYKNLKERTENPTPQTVGSGFFVAQRNN 25
           ++YK L  R+ + T  TVG+G  +A+  N
Sbjct: 553 SQYKLLNNRSYHSTLLTVGNGLLLAETEN 581


>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
           gi|223535313|gb|EEF36988.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 1794

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/91 (43%), Positives = 62/91 (68%)
 Frame = -2

Query: 303 INLGSLSKFSHSAVPNNIPYVIDGDVSFKATCETLVKWLGEDRFGLDVEFVQEIIEHLPR 124
           I+  SL+KF H + P N+ + ++ +     +CE LV+WLG+DRFGLD++FVQEIIE LP 
Sbjct: 288 ISPDSLAKFCHLSGPFNVLHHVESNDDLANSCEALVEWLGQDRFGLDIDFVQEIIEQLPG 347

Query: 123 VAACTEYKNLKERTENPTPQTVGSGFFVAQR 31
           V +C++Y  L +R+     QTV +G+ + +R
Sbjct: 348 VQSCSDYTFLDKRSNQSKLQTVQNGYLLVKR 378


Top