BLASTX nr result
ID: Lithospermum22_contig00046990
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Lithospermum22_contig00046990 (318 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002523525.1| protein with unknown function [Ricinus commu... 59 4e-07 ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l... 56 4e-06 ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2... 55 8e-06 >ref|XP_002523525.1| protein with unknown function [Ricinus communis] gi|223537232|gb|EEF38864.1| protein with unknown function [Ricinus communis] Length = 530 Score = 58.9 bits (141), Expect = 4e-07 Identities = 43/104 (41%), Positives = 57/104 (54%), Gaps = 5/104 (4%) Frame = +1 Query: 10 KRQQI---KSYKLSPEKKQ-KREEPVVLRRSSRIRGVKPDASTVGGLPDDFHETPH-NMR 174 KRQ+I KSYK SPEKK+ K + P+V+R+S RIRG+ P++ GL DF P N Sbjct: 42 KRQRIGSSKSYKASPEKKKPKNDSPIVIRQSLRIRGMPPNSI---GLDHDFSGMPSVNAA 98 Query: 175 PKRGFEPASRGLCRESEPFSMSDAYRGEGSSKEITDLIRSFLIK 306 + S R P SM+DAY G GS + + D + S K Sbjct: 99 TTSAVQKPSP---RVMGPLSMTDAYSGTGSFRALIDTVVSLETK 139 >ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera] Length = 489 Score = 55.8 bits (133), Expect = 4e-06 Identities = 27/53 (50%), Positives = 38/53 (71%) Frame = +1 Query: 1 SKCKRQQIKSYKLSPEKKQKREEPVVLRRSSRIRGVKPDASTVGGLPDDFHET 159 +K +R + KS K+SP+KK K E P+V+RRS R RG+ PD S+ GL D+F E+ Sbjct: 40 AKRRRVESKSNKVSPKKKPKTESPIVIRRSLRTRGLPPDFSSGNGLKDEFVES 92 >ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1| predicted protein [Populus trichocarpa] Length = 513 Score = 54.7 bits (130), Expect = 8e-06 Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Frame = +1 Query: 25 KSYKLSPEKKQKREE-PVVLRRSSRIRGVKPDASTVGGLPDDFHETPHNMRPKRGFEPAS 201 KSYK+SPEKK K+ E P+V+RRS R RG+ PD++ L D +E + Sbjct: 49 KSYKVSPEKKPKKAETPIVIRRSLRTRGMPPDSNC---LDADSNENSDKTTLNQTSISRE 105 Query: 202 RGLCRESEPFSMSDAYRGEGSSKEITDLIRSF 297 + P M DA+ G GS +E D + SF Sbjct: 106 KPSPCVMGPLKMKDAHDGTGSDREFIDTLLSF 137