BLASTX nr result

ID: Lithospermum22_contig00046947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046947
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634252.1| PREDICTED: uncharacterized protein LOC100854...   114   8e-24
ref|XP_002527914.1| conserved hypothetical protein [Ricinus comm...   112   2e-23
ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|NP_001077508.1| poor homologous synapsis 1 [Arabidopsis thal...    94   1e-17
ref|NP_172541.2| poor homologous synapsis 1 [Arabidopsis thalian...    94   1e-17

>ref|XP_003634252.1| PREDICTED: uncharacterized protein LOC100854468 [Vitis vinifera]
           gi|297733727|emb|CBI14974.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  114 bits (285), Expect = 8e-24
 Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = -3

Query: 477 WQVEYARFVATPPRESLRPT-HPRLVAGNNRTHSLYDGGQWLKNSTTSAVAKITYSSYYD 301
           W+++Y+RF   P   S  P   P       RTH     G W+ +S T+++  +++    +
Sbjct: 24  WEIQYSRFFNYPCISSTSPILRPLPTTKRIRTH-----GTWV-SSPTASLHLLSHHFSAE 77

Query: 300 AVLIISLNHRIMEEHSVMKLHFSWAQMSCASRTAVRGSRAIFASFKDPAGQIQKFAMRFL 121
            VL+ISL  +I EEH + KLHFSW Q+SC +   VRGSR IFAS+ D  GQIQKFAMRF 
Sbjct: 78  LVLVISLQEKIHEEHFISKLHFSWPQVSCVNECPVRGSRVIFASYSDCVGQIQKFAMRFS 137

Query: 120 DASESQSFINTLKRSLKYNSTVGTLSNNS 34
            ASESQSF++++K ++K       L  +S
Sbjct: 138 AASESQSFMDSVKATMKPERNSSELGKSS 166


>ref|XP_002527914.1| conserved hypothetical protein [Ricinus communis]
           gi|223532689|gb|EEF34471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score =  112 bits (281), Expect = 2e-23
 Identities = 67/158 (42%), Positives = 96/158 (60%), Gaps = 4/158 (2%)
 Frame = -3

Query: 477 WQ-VEYARFVATPPRESLRPTHPRLVAGNNRTHSLYDGGQWLKNSTTSAVAKI-TYSSYY 304
           WQ V Y+RF+  P   SL  THP L+  +N        G WL + + +A  +I  Y S  
Sbjct: 24  WQKVSYSRFITYP---SLPSTHPSLIPFSNSCRYKGTRGTWLSSHSPTASLQIRNYKSIS 80

Query: 303 DAVLIISLNHRIMEEHSVMKLHFSWAQMSCASRTAVRGSRAIFASFKDPAGQIQKFAMRF 124
            AVL + L+  I+EEH V KLHF+W  +SC S    RGSR++F S+KD  GQIQKFA+RF
Sbjct: 81  HAVLTVCLHGNILEEHYVSKLHFTWPLVSCLSGYPPRGSRSLFVSYKDSLGQIQKFALRF 140

Query: 123 LDASESQSFINTLKRSLKYNSTVGTLSNN--SSMNMQS 16
              SE+++FIN LK  LK ++    L+++  S ++++S
Sbjct: 141 SVISEAETFINALKDILKDSTETEPLNSDIRSEISLES 178


>ref|XP_002314603.1| predicted protein [Populus trichocarpa] gi|222863643|gb|EEF00774.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 2/137 (1%)
 Frame = -3

Query: 486 TMTWQVEYARFVATPPRESLRPTHPRLVAGNNRTHSLYDGGQWLKN-STTSAVAKITY-S 313
           T  WQV ++RF+  P   SL  T P L+   +        G W+ + S T+++  + Y S
Sbjct: 27  TDQWQVTFSRFINYP---SLPSTCPSLIPLPHNRKCRPTRGTWISSVSATASLQLLNYQS 83

Query: 312 SYYDAVLIISLNHRIMEEHSVMKLHFSWAQMSCASRTAVRGSRAIFASFKDPAGQIQKFA 133
           +  DA+L +SLN  ++EEH V KLHFSW Q+SC S    RG+RA+F +FKD   +IQKF 
Sbjct: 84  NSKDAILGLSLNGTVLEEHYVWKLHFSWPQVSCVSGYPSRGTRAVFVTFKDSLDEIQKFG 143

Query: 132 MRFLDASESQSFINTLK 82
            RF   SE+++FIN LK
Sbjct: 144 FRFSTFSEAEAFINALK 160


>ref|NP_001077508.1| poor homologous synapsis 1 [Arabidopsis thaliana]
           gi|71905395|gb|AAZ52675.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|332190511|gb|AEE28632.1| poor homologous synapsis 1
           [Arabidopsis thaliana]
          Length = 349

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
 Frame = -3

Query: 477 WQVEYARFVATPPRESLRPTHPRLVAGNNRTHSLYDGGQWLK-NSTTSAVAKITYSSYYD 301
           W + +ARFV  P   S    HP L     R       G WL  +S+T ++  +   +  D
Sbjct: 23  WTIGFARFVHYPSSPS---PHPVLKPLGKREQYHSPHGTWLSASSSTVSLHIVDELNRSD 79

Query: 300 AVLIISLNHRIMEEHSVMKLHFSWAQMSCASRTAVRGSRAIFASFKDPAGQIQKFAMRFL 121
            +L + L  +++EEH + KL+F+W QMSC S    RGSRAIF ++ D A QIQKFA+RF 
Sbjct: 80  VILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQIQKFALRFS 139

Query: 120 DASESQSFINTLKRSLK 70
               +  F+  LK  +K
Sbjct: 140 TCDAALEFVEALKEKIK 156


>ref|NP_172541.2| poor homologous synapsis 1 [Arabidopsis thaliana]
           gi|60547545|gb|AAX23736.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|71905393|gb|AAZ52674.1| hypothetical protein
           At1g10710 [Arabidopsis thaliana]
           gi|332190510|gb|AEE28631.1| poor homologous synapsis 1
           [Arabidopsis thaliana]
          Length = 410

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
 Frame = -3

Query: 477 WQVEYARFVATPPRESLRPTHPRLVAGNNRTHSLYDGGQWLK-NSTTSAVAKITYSSYYD 301
           W + +ARFV  P   S    HP L     R       G WL  +S+T ++  +   +  D
Sbjct: 23  WTIGFARFVHYPSSPS---PHPVLKPLGKREQYHSPHGTWLSASSSTVSLHIVDELNRSD 79

Query: 300 AVLIISLNHRIMEEHSVMKLHFSWAQMSCASRTAVRGSRAIFASFKDPAGQIQKFAMRFL 121
            +L + L  +++EEH + KL+F+W QMSC S    RGSRAIF ++ D A QIQKFA+RF 
Sbjct: 80  VILSVKLGQKVLEEHYISKLNFTWPQMSCVSGFPSRGSRAIFVTYMDSANQIQKFALRFS 139

Query: 120 DASESQSFINTLKRSLK 70
               +  F+  LK  +K
Sbjct: 140 TCDAALEFVEALKEKIK 156


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