BLASTX nr result

ID: Lithospermum22_contig00046937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046937
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519113.1| pentatricopeptide repeat-containing protein,...    82   6e-14
ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
emb|CBI32533.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11

>ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541776|gb|EEF43324.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/62 (61%), Positives = 48/62 (77%)
 Frame = -1

Query: 304 KSYELVIEGLCAKGKVDDALKLQVDMVAQGYEPDSKIYDVFIHGYMDQGNQEMAQKLRRE 125
           KSYEL+I+GLC  GK+D+ALKLQ +MV  G+EP+ +IY  FI GYM  GN+EMA  LR+E
Sbjct: 416 KSYELLIKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDGYMKLGNEEMAAMLRKE 475

Query: 124 FS 119
            S
Sbjct: 476 MS 477


>ref|XP_002306075.1| predicted protein [Populus trichocarpa] gi|222849039|gb|EEE86586.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/62 (58%), Positives = 48/62 (77%)
 Frame = -1

Query: 304 KSYELVIEGLCAKGKVDDALKLQVDMVAQGYEPDSKIYDVFIHGYMDQGNQEMAQKLRRE 125
           KSYEL+I GLC  GK+++ALKLQ +MV +G++P+S IY  FI GY+  GN+EMA  LR+E
Sbjct: 424 KSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAMLRKE 483

Query: 124 FS 119
            S
Sbjct: 484 MS 485


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 31/60 (51%), Positives = 49/60 (81%)
 Frame = -1

Query: 304 KSYELVIEGLCAKGKVDDALKLQVDMVAQGYEPDSKIYDVFIHGYMDQGNQEMAQKLRRE 125
           KSYE +I+GLC  G++++ALK+Q +MV +G++P+S+IY  F+ GY+  GN+EMA+ LR+E
Sbjct: 420 KSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSEIYGAFVDGYVRHGNEEMAEALRKE 479


>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/60 (53%), Positives = 47/60 (78%)
 Frame = -1

Query: 304 KSYELVIEGLCAKGKVDDALKLQVDMVAQGYEPDSKIYDVFIHGYMDQGNQEMAQKLRRE 125
           KSYE +I+G C +GK+++A KLQ +MV +G++P  +IY  FI GYM QGN+E+A+ LR+E
Sbjct: 229 KSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIAETLRKE 288


>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/60 (53%), Positives = 47/60 (78%)
 Frame = -1

Query: 304 KSYELVIEGLCAKGKVDDALKLQVDMVAQGYEPDSKIYDVFIHGYMDQGNQEMAQKLRRE 125
           KSYE +I+G C +GK+++A KLQ +MV +G++P  +IY  FI GYM QGN+E+A+ LR+E
Sbjct: 422 KSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPTLEIYSAFIDGYMKQGNKEIAETLRKE 481


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