BLASTX nr result

ID: Lithospermum22_contig00046930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046930
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270936.2| PREDICTED: glutamate receptor 2.7-like [Viti...    69   3e-10
emb|CBI23989.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|NP_180474.1| glutamate receptor 2.9 [Arabidopsis thaliana] g...    68   7e-10
ref|XP_002863052.1| predicted protein [Arabidopsis lyrata subsp....    67   1e-09
ref|NP_180476.3| glutamate receptor 2.7 [Arabidopsis thaliana] g...    66   3e-09

>ref|XP_002270936.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 707

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
 Frame = -1

Query: 287 IPVFAFSP-----SSFQSPYFIQVSLDDSYRPRAIASIFQYFNWTNAVVIYQENDSGDNF 123
           +P+ +FS      SS QS YFI+ +L+DS +  AI +I Q F W   V+IY +N+ G+  
Sbjct: 124 VPIISFSATSPSLSSLQSQYFIRATLNDSAQVPAIRAIVQTFGWREVVLIYVDNEYGNGV 183

Query: 122 VSKLNQQFNEVGVQTYHMIPIPSSVEDSYIVKQLNKTMEL 3
           +  L   F EV     +  PI  SV D  +V++L+K M +
Sbjct: 184 IPSLTSAFLEVDAHVTYWSPIHPSVTDDQLVEELHKLMRI 223


>emb|CBI23989.3| unnamed protein product [Vitis vinifera]
          Length = 776

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
 Frame = -1

Query: 287 IPVFAFSP-----SSFQSPYFIQVSLDDSYRPRAIASIFQYFNWTNAVVIYQENDSGDNF 123
           +P+ +FS      SS QS YFI+ +L+DS +  AI +I Q F W   V+IY +N+ G+  
Sbjct: 217 VPIISFSATSPSLSSLQSQYFIRATLNDSAQVPAIRAIVQTFGWREVVLIYVDNEYGNGV 276

Query: 122 VSKLNQQFNEVGVQTYHMIPIPSSVEDSYIVKQLNKTMEL 3
           +  L   F EV     +  PI  SV D  +V++L+K M +
Sbjct: 277 IPSLTSAFLEVDAHVTYWSPIHPSVTDDQLVEELHKLMRI 316


>ref|NP_180474.1| glutamate receptor 2.9 [Arabidopsis thaliana]
           gi|41017071|sp|O81078.1|GLR29_ARATH RecName:
           Full=Glutamate receptor 2.9; AltName: Full=Ligand-gated
           ion channel 2.9; Flags: Precursor
           gi|3461850|gb|AAC33236.1| putative ligand-gated ion
           channel protein [Arabidopsis thaliana]
           gi|330253117|gb|AEC08211.1| glutamate receptor 2.9
           [Arabidopsis thaliana]
          Length = 940

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
 Frame = -1

Query: 287 IPVFAFSPSS-----FQSPYFIQVSLDDSYRPRAIASIFQYFNWTNAVVIYQENDSGDNF 123
           +P   FS +S      +SPYF++ ++DDS + RAIASIF++F W   V IY +N+ G+ F
Sbjct: 119 VPTITFSATSPLLTSIKSPYFVRATIDDSSQVRAIASIFKFFRWRRVVAIYVDNEFGEGF 178

Query: 122 VSKLNQQFNEVGVQTYHMIPIPSSVEDSYIVKQLNKTME 6
           +  L     +V V+   +IP P +++D  I K+L K ME
Sbjct: 179 MPFLFDALQDVEVKR-SVIP-PEAIDDE-IQKELRKLME 214


>ref|XP_002863052.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297308857|gb|EFH39311.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 947

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
 Frame = -1

Query: 287 IPVFAFSPSS-----FQSPYFIQVSLDDSYRPRAIASIFQYFNWTNAVVIYQENDSGDNF 123
           +P   FS +S       SPYF++ +LDDS + +AIA+I + F W N V IY +N+ G+  
Sbjct: 128 VPTITFSTTSPLMTSINSPYFVRTTLDDSSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGI 187

Query: 122 VSKLNQQFNEVGVQTYHMIPIPSSVEDSYIVKQLNKTMEL 3
           +  L     +V     +   IP    D  I+K+L K M +
Sbjct: 188 IPYLTDALQDVQALIVNRCSIPQEANDDQILKELYKLMTM 227


>ref|NP_180476.3| glutamate receptor 2.7 [Arabidopsis thaliana]
           gi|148877234|sp|Q8LGN0.3|GLR27_ARATH RecName:
           Full=Glutamate receptor 2.7; AltName: Full=Ligand-gated
           ion channel 2.7; Flags: Precursor
           gi|40557616|gb|AAR88101.1| putative glutamate receptor
           ion channel [Arabidopsis thaliana]
           gi|330253119|gb|AEC08213.1| glutamate receptor 2.7
           [Arabidopsis thaliana]
          Length = 952

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
 Frame = -1

Query: 287 IPVFAFSPS-----SFQSPYFIQVSLDDSYRPRAIASIFQYFNWTNAVVIYQENDSGDNF 123
           +P   FS +     S  SPYF++ +LDDS + +AIA+I + F W N V IY +N+ G+  
Sbjct: 128 VPTITFSATCPLLTSINSPYFVRATLDDSSQVKAIAAIVKSFGWRNVVAIYVDNEFGEGI 187

Query: 122 VSKLNQQFNEVGVQTYHMIPIPSSVEDSYIVKQLNKTMEL 3
           +  L     +V     +   IP    D  I+K+L K M +
Sbjct: 188 LPLLTDALQDVQAFVVNRCLIPQEANDDQILKELYKLMTM 227


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