BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046920
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,...   133   2e-29
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ...   128   4e-28
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar...   127   1e-27

>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/122 (58%), Positives = 95/122 (77%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFEE ES V D I+FNV+I GL S+GR+EEAL+MFK+M+   L+PTELTFVSV+SSCSSA
Sbjct: 241 VFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSA 300

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
           R+  QV++Q  K GFE  T V+NA M+M+S C    A  ++FDR++EKD++SWN +I ++
Sbjct: 301 RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNY 360

Query: 364 AQ 369
           AQ
Sbjct: 361 AQ 362



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
 Frame = +1

Query: 40  ISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA---RIGMQVYSQ 210
           IS+N +I G +  G   + L  F ++    LKP   T   V+S C+S    R G Q++  
Sbjct: 449 ISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGY 508

Query: 211 VFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSFAQ 369
           + ++G    TS+ NAL++M++KC + D ++ IF+ +  +D+VSWN MI+++AQ
Sbjct: 509 ILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQ 561



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/120 (32%), Positives = 63/120 (52%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VF+  E K  D IS+N++I           A+L F  M+  G++P E T  S+++S  S 
Sbjct: 341 VFDRLEEK--DLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESL 398

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
            I     + V K G      V+NAL+S FSK  + +    +F+ +   +++SWNT+I+ F
Sbjct: 399 EIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGF 458



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = +1

Query: 40  ISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSARI--GMQVYSQV 213
           + +N +I G       E AL +F++M  LG++  + TF SV+S CS   +  G +V++ V
Sbjct: 151 VVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLELLDFGREVHTLV 210

Query: 214 FKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKE--KDVVSWNTMITSFA 366
            KTGF    SV NAL++M+    +      +F+  +    D +++N MI   A
Sbjct: 211 IKTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLA 263


>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Cucumis sativus]
          Length = 735

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/122 (54%), Positives = 90/122 (73%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFE  ES+V DQI++NV+IDGLV + R EEAL+MFKDMK   L PTELTFVS++SSCS  
Sbjct: 248 VFEGTESEVRDQITYNVMIDGLVCVRRNEEALIMFKDMKRACLSPTELTFVSIMSSCSII 307

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
           ++  QV+SQ  K GFE FT V N+ ++M++ C EF A   +F  + EKD++SWN +I+S+
Sbjct: 308 QVAQQVHSQAIKLGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSY 367

Query: 364 AQ 369
            Q
Sbjct: 368 VQ 369



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSC--- 174
           VF E  SK +  IS+N VI G +  G   +AL  F  +    LKP+  T   V+S C   
Sbjct: 446 VFSEINSKNI--ISWNTVIYGFLLNGLPLQALEHFSKLIMSKLKPSTFTLSIVLSICANI 503

Query: 175 SSARIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMI 354
           S+  IG Q++  + ++G    TS+ N L++M+SKC     ++  F+ + E+D+VSWN++I
Sbjct: 504 STLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGWSLRTFNVMIERDIVSWNSII 563

Query: 355 TSFAQ 369
           +++AQ
Sbjct: 564 SAYAQ 568



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/110 (31%), Positives = 59/110 (53%)
 Frame = +1

Query: 34  DQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSARIGMQVYSQV 213
           D IS+N +I   V     + A+L F  M+  G+ P E TF S++       I   V++ V
Sbjct: 356 DLISWNAIISSYVQGNFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYV 415

Query: 214 FKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
           +K G      + NAL+S ++KC +   ++ +F  +  K+++SWNT+I  F
Sbjct: 416 YKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGF 465



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/107 (30%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
 Frame = +1

Query: 46  FNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA--RIGMQVYSQVFK 219
           +N +I G    G +  A+  F +M  +G+KP   +F  ++S C+     +G QV+S V K
Sbjct: 160 WNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILSLCTKEIEDLGRQVHSSVIK 219

Query: 220 TGFEDFTSVANALMSMFSKCEEFDATILIFDRVKE--KDVVSWNTMI 354
            G+   TSV NAL++M+   E  +    +F+  +   +D +++N MI
Sbjct: 220 AGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITYNVMI 266


>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 684

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/122 (53%), Positives = 90/122 (73%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFEE E  V DQI++NV+IDGLVS+GR EEAL++ + M    L+P ELTFVS++SSC  A
Sbjct: 254 VFEEAEDSVRDQITYNVMIDGLVSVGRIEEALIICRKMLGSCLRPNELTFVSLMSSCLHA 313

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
            IG Q ++Q  K GFE  TS++NA ++M+S C++  A   +F+R++ KD VSWNTMI+S+
Sbjct: 314 EIGYQFHAQAIKMGFEASTSLSNATITMYSSCKDLHAARKVFERLERKDPVSWNTMISSY 373

Query: 364 AQ 369
            Q
Sbjct: 374 TQ 375



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
 Frame = +1

Query: 34  DQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSARI---GMQVY 204
           D IS+N +I G +  G     L  F +++    K  E T   ++S C+S      G QV+
Sbjct: 460 DLISWNSIISGFLLNGLPLLGLEKFSELQMSEFKSNEYTLNIILSICASIPALGQGKQVH 519

Query: 205 SQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSFAQ 369
             + ++GF    S+ N L++ ++KC   D +  +F  + +KD VSWN +I+++AQ
Sbjct: 520 GYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQ 574



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
 Frame = +1

Query: 34  DQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSARI--GMQVYS 207
           D + +N +I G +  G EE  L  F+DM   G++    +  SV+S C    +  GMQV+S
Sbjct: 162 DVVVWNALITGCMESGNEEIGLNYFRDMCRSGVRHDNYSLASVLSGCKLVMVNFGMQVHS 221

Query: 208 QVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKE--KDVVSWNTMI 354
            V K+G     SV NAL++M+  CE      L+F+  ++  +D +++N MI
Sbjct: 222 LVIKSGSLVEPSVINALITMYFNCENVLDGYLVFEEAEDSVRDQITYNVMI 272



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/120 (30%), Positives = 62/120 (51%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFE  E K  D +S+N +I           A+L + +M+  G +P E TF S+++S    
Sbjct: 354 VFERLERK--DPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTEPDEFTFGSLLASSELL 411

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
                +++ VF+        V+NAL S +SK    + +  IF  +  +D++SWN++I+ F
Sbjct: 412 ETVEMIHALVFRNSLISNIQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSIISGF 471


>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321831|gb|EFH52252.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 731

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/122 (50%), Positives = 90/122 (73%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFEE +  V DQ++FNVVIDGL    REE +LL+F+ M   GL+PT+LTFVSV+SSCS  
Sbjct: 240 VFEEADVAVRDQVTFNVVIDGLAGFKREE-SLLVFRQMVEAGLRPTDLTFVSVMSSCSCE 298

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
            +G QV+    KTG+E++T V+N+ M+M+S  E+F A   +F+ ++EKD+++WNTMI+ +
Sbjct: 299 TMGHQVHGLSIKTGYEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGY 358

Query: 364 AQ 369
            Q
Sbjct: 359 NQ 360



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/120 (35%), Positives = 66/120 (55%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFE  E K  D I++N +I G       + ALL++K M  +G+KP E TF S+++S    
Sbjct: 339 VFESLEEK--DLITWNTMISGYNQANLGQSALLLYKRMHGIGVKPDEFTFGSLLASSLDL 396

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
                V + V K G      ++NAL+S +SK  +     LIF+   +K+++SWN +I+ F
Sbjct: 397 DALEMVQACVIKFGLSSKIEISNALISAYSKHGKITKADLIFESSPKKNLISWNAIISGF 456



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDM--KNLGLKPTELTFVSVISSC- 174
           +FE    K L  IS+N +I G    G   E L  F  +    + + P   T   ++S C 
Sbjct: 437 IFESSPKKNL--ISWNAIISGFYHNGFSFEGLERFSCLLEAEVLIIPDAYTLSILLSICV 494

Query: 175 --SSARIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNT 348
             SS  +G Q ++   + G    T + NA ++M+S+C     ++ +F ++ +KD VSWN+
Sbjct: 495 DISSLMLGEQTHAYALRHGQFKETLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNS 554

Query: 349 MITSFAQ 369
           +I+++A+
Sbjct: 555 LISAYAR 561



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
 Frame = +1

Query: 34  DQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSC--SSARIGMQVYS 207
           D   +N +I G    G    ++ +F++M  LG++  +  F +V+S C   S   G QV+S
Sbjct: 148 DVAVWNAMITGCKESGYHGTSIELFREMHKLGVRHDKFGFATVLSMCYYGSLDFGKQVHS 207

Query: 208 QVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDR--VKEKDVVSWNTMITSFA 366
            V K GF   +SV NAL++M+  C+      L+F+   V  +D V++N +I   A
Sbjct: 208 LVIKAGFFVASSVVNALITMYFNCQVVVDARLVFEEADVAVRDQVTFNVVIDGLA 262


>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g49740 gi|6723419|emb|CAB66912.1| putative protein
           [Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 737

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/122 (51%), Positives = 89/122 (72%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFEE +  V DQ++FNVVIDGL    R+E +LL+F+ M    L+PT+LTFVSV+ SCS A
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSVMGSCSCA 304

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
            +G QV+    KTG+E +T V+NA M+M+S  E+F A   +F+ ++EKD+V+WNTMI+S+
Sbjct: 305 AMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSY 364

Query: 364 AQ 369
            Q
Sbjct: 365 NQ 366



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 36/120 (30%), Positives = 66/120 (55%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCSSA 183
           VFE  E K  D +++N +I         + A+ ++K M  +G+KP E TF S++++    
Sbjct: 345 VFESLEEK--DLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402

Query: 184 RIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNTMITSF 363
            +   V + + K G      ++NAL+S +SK  + +   L+F+R   K+++SWN +I+ F
Sbjct: 403 DVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGF 462



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
 Frame = +1

Query: 4   VFEEGESKVLDQISFNVVIDGLVSMGREEEAL-----LMFKDMKNLGLKPTELTFVSVIS 168
           +FE    K L  IS+N +I G    G   E L     L+  +++ L    T  T +S+  
Sbjct: 443 LFERSLRKNL--ISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICV 500

Query: 169 SCSSARIGMQVYSQVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDRVKEKDVVSWNT 348
           S SS  +G Q ++ V + G    T + NAL++M+S+C     ++ +F+++ EKDVVSWN+
Sbjct: 501 STSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNS 560

Query: 349 MITSFAQ 369
           +I+++++
Sbjct: 561 LISAYSR 567



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
 Frame = +1

Query: 34  DQISFNVVIDGLVSMGREEEALLMFKDMKNLGLKPTELTFVSVISSCS--SARIGMQVYS 207
           D   +N +I G    G  E ++ +F++M  LG++  +  F +++S C   S   G QV+S
Sbjct: 154 DVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHS 213

Query: 208 QVFKTGFEDFTSVANALMSMFSKCEEFDATILIFDR--VKEKDVVSWNTMITSFA 366
            V K GF   +SV NAL++M+  C+      L+F+   V  +D V++N +I   A
Sbjct: 214 LVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268