BLASTX nr result

ID: Lithospermum22_contig00046873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046873
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        84   9e-15
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            82   5e-14
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    82   5e-14
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    82   6e-14
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/85 (45%), Positives = 51/85 (60%)
 Frame = +1

Query: 40   SWKSKCLSFTDRLALIKSVVFSTYNYWRQSVFLPVMVIKGITKLIKRFLWGGSTDSRNPC 219
            SW +KCLSF  R+ LI SV+F + N+W  +  LP   IK I  L  RFLW G+ +     
Sbjct: 792  SWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQAKGI 851

Query: 220  KVR*KDINLPKEEGGLGIKDILSWN 294
            KV    + LPK EGGLG++ +L WN
Sbjct: 852  KVSWAALCLPKSEGGLGLRRLLEWN 876


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/85 (48%), Positives = 46/85 (54%)
 Frame = +1

Query: 40  SWKSKCLSFTDRLALIKSVVFSTYNYWRQSVFLPVMVIKGITKLIKRFLWGGSTDSRNPC 219
           SW SK LSF  R  LI SV+F   N+W  +  LP   IK I  L  +FLW GS D R   
Sbjct: 652 SWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSS 711

Query: 220 KVR*KDINLPKEEGGLGIKDILSWN 294
           KV   D  LPK EGGLG +    WN
Sbjct: 712 KVSWVDCCLPKSEGGLGFRSFGEWN 736


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 41/85 (48%), Positives = 46/85 (54%)
 Frame = +1

Query: 40  SWKSKCLSFTDRLALIKSVVFSTYNYWRQSVFLPVMVIKGITKLIKRFLWGGSTDSRNPC 219
           SW SK LSF  R  LI SV+F   N+W  +  LP   IK I  L  +FLW GS D R   
Sbjct: 652 SWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSS 711

Query: 220 KVR*KDINLPKEEGGLGIKDILSWN 294
           KV   D  LPK EGGLG +    WN
Sbjct: 712 KVSWVDCCLPKSEGGLGFRSFGEWN 736


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/84 (45%), Positives = 51/84 (60%)
 Frame = +1

Query: 43   WKSKCLSFTDRLALIKSVVFSTYNYWRQSVFLPVMVIKGITKLIKRFLWGGSTDSRNPCK 222
            W +K LSF  RL LI SV++ST N+W  S  LP   +K I ++  RFLWG     R   K
Sbjct: 792  WATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIK 851

Query: 223  VR*KDINLPKEEGGLGIKDILSWN 294
            V  ++  LPK EGGLG+++  +WN
Sbjct: 852  VSWQNSCLPKAEGGLGLRNFWTWN 875


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/86 (44%), Positives = 49/86 (56%)
 Frame = +1

Query: 43  WKSKCLSFTDRLALIKSVVFSTYNYWRQSVFLPVMVIKGITKLIKRFLWGGSTDSRNPCK 222
           W  + LS+  R+ LI SV+FS   YW     LP  VIK + +++K FLW GS       K
Sbjct: 87  WTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAK 146

Query: 223 VR*KDINLPKEEGGLGIKDILSWNYV 300
           V    + LPK+EGGLGIK I  WN +
Sbjct: 147 VAWDQVCLPKKEGGLGIKSIKEWNKI 172


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