BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046872
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-15
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    75   3e-13
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    71   1e-12
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    74   3e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        69   3e-12

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 73.9 bits (180), Expect(2) = 1e-15
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = -3

Query: 251 IKHVWSICVGKE-ALWVRWINTVRLKGQSFWGIASKSTDSWTWRKLLQLRELLKSHVKYY 75
           +KH+W++C   + ++W  WI +  L+G++FW I +    SW W K+L+LR L    +KY 
Sbjct: 175 LKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYI 234

Query: 74  VGNGESINCMFDNWSTNGVIAE 9
           +G+G + +  FDNW  +  +A+
Sbjct: 235 IGDGMTTSLWFDNWHPHSPLAD 256



 Score = 33.5 bits (75), Expect(2) = 1e-15
 Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -2

Query: 309 QATLKKEEGGLGIKSLYNWNQ-ACMEHL 229
           Q  L K+EGGLGIKS+  WN+ A ++H+
Sbjct: 151 QVCLPKKEGGLGIKSIKEWNKIALLKHI 178


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 75.1 bits (183), Expect(2) = 3e-13
 Identities = 32/83 (38%), Positives = 50/83 (60%)
 Frame = -3

Query: 251 IKHVWSICVGKEALWVRWINTVRLKGQSFWGIASKSTDSWTWRKLLQLRELLKSHVKYYV 72
           +K +W I    ++LWV+WI T  LK  +FW   S S  SW W+KLL+ R+  K+  K  +
Sbjct: 406 LKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDI 465

Query: 71  GNGESINCMFDNWSTNGVIAEYL 3
            NGE+ +  +D+WS+ G + + L
Sbjct: 466 RNGETASFWYDDWSSKGRLIDVL 488



 Score = 24.3 bits (51), Expect(2) = 3e-13
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 294 KEEGGLGIKSLYNWNQAC 241
           K EGGLG++S+   N  C
Sbjct: 387 KREGGLGLQSIKEANDVC 404


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 71.2 bits (173), Expect(2) = 1e-12
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -3

Query: 251  IKHVWSICVGKEALWVRWINTVRLKGQSFWGIASK-STDSWTWRKLLQLRELLKSHVKYY 75
            +K VW I     +LWV+W++   L+  SFW +    S  SW W+KLL+ RE+ K+  K  
Sbjct: 888  LKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVE 947

Query: 74   VGNGESINCMFDNWSTNGVIAE 9
            VGNG+  +  +DNWS  G + E
Sbjct: 948  VGNGKQTSFWYDNWSDLGQLLE 969



 Score = 26.2 bits (56), Expect(2) = 1e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 294 KEEGGLGIKSLYNWNQAC 241
           K+EGGLG++SL   N  C
Sbjct: 869 KDEGGLGLRSLKEANDVC 886


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 73.9 bits (180), Expect(2) = 3e-12
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = -3

Query: 260 IIGIKHVWSICVGKEALWVRWINTVRLKGQSFWGIASKST-DSWTWRKLLQLRELLKSHV 84
           +  +K +W +   +++LWV+W     LK +SFW I + ST  SW WR+LL+ RE+ KS  
Sbjct: 606 VSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFC 665

Query: 83  KYYVGNGESINCMFDNWSTNG 21
           K  V NG + +  FDNWS  G
Sbjct: 666 KIEVNNGVNTSFWFDNWSEKG 686



 Score = 22.3 bits (46), Expect(2) = 3e-12
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -2

Query: 294 KEEGGLGIKSLYNWNQ 247
           K+EGGLG++SL   N+
Sbjct: 590 KKEGGLGLQSLREANK 605


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 68.9 bits (167), Expect(2) = 3e-12
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = -3

Query: 257  IGIKHVWSICVGKEALWVRWINTVRLKGQSFWGIASKSTDSWTWRKLLQLRELLKSHVKY 78
            + ++ +W + V K++LW  W +   L   SFW +    +DSWTW++LL LR L    +  
Sbjct: 879  LSMRLIWRLFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVC 938

Query: 77   YVGNGESINCMFDNWSTNG 21
             VGNG   +  +DNW++ G
Sbjct: 939  KVGNGLKADYWYDNWTSLG 957



 Score = 27.3 bits (59), Expect(2) = 3e-12
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 300 LKKEEGGLGIKSLYNWNQ 247
           L K EGGLG++ L  WN+
Sbjct: 860 LPKSEGGLGLRRLLEWNK 877