BLASTX nr result

ID: Lithospermum22_contig00046858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046858
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 ...    55   6e-06
emb|CAN76527.1| hypothetical protein VITISV_010779 [Vitis vinifera]    55   6e-06
ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-...    55   8e-06
ref|XP_002518449.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 [Vitis vinifera]
          Length = 430

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
 Frame = +2

Query: 44  AAISIPRLIKGSQISIPLQLRTTFEDE-------TIIVPNLPQNKKSKADDFTGP----- 187
           A I++P+L  GS +S+ L  R   ++        T       + K     D T P     
Sbjct: 28  ATINMPKLRTGS-LSLKLPARDLVQEVLDMGVSLTAATTGHVEKKNESRADSTIPSVSNV 86

Query: 188 -DPLVIAKLYEILEGISDRVEMHKNVGEQR 274
            DP+V+AKL+EI+E ++DRVEMHKN+GEQR
Sbjct: 87  SDPMVMAKLHEIMEAVADRVEMHKNIGEQR 116


>emb|CAN76527.1| hypothetical protein VITISV_010779 [Vitis vinifera]
          Length = 383

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 13/90 (14%)
 Frame = +2

Query: 44  AAISIPRLIKGSQISIPLQLRTTFEDE-------TIIVPNLPQNKKSKADDFTGP----- 187
           A I+IP+L  GS +S+ L  R   ++        T       + K     D T P     
Sbjct: 28  ATINIPKLRTGS-LSLKLPARDLVQEVLDMGVSLTAATTGHVEKKYESITDTTFPSVSNV 86

Query: 188 -DPLVIAKLYEILEGISDRVEMHKNVGEQR 274
            DP+VIAKL+ I+E ++DRVEMHKN+GEQR
Sbjct: 87  SDPMVIAKLHAIMEAVADRVEMHKNIGEQR 116


>ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 657

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
 Frame = +2

Query: 44  AAISIPRLIKGSQISIPLQLRTTFEDE-------TIIVPNLPQNKKSKADDFTGP----- 187
           A I++P+L  GS +S+ L  R   ++        T       + K     D T P     
Sbjct: 28  ATINMPKLRTGS-LSLKLPSRDLVQEVLDMGVSLTAATTGHVEKKNESRADSTIPSVSNV 86

Query: 188 -DPLVIAKLYEILEGISDRVEMHKNVGEQR 274
            DP+V+AKL+EI+E ++DRVEMHKN+GEQR
Sbjct: 87  SDPMVMAKLHEIMEAVADRVEMHKNIGEQR 116


>ref|XP_002518449.1| conserved hypothetical protein [Ricinus communis]
           gi|223542294|gb|EEF43836.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 418

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
 Frame = +2

Query: 32  RNISAAISIPRLIKGSQISIPLQLRTTFEDETIIVPNLPQNKKSKADDFTG--------- 184
           R   AA ++P++  G   S  L      E+ ++    +P     + D  +G         
Sbjct: 23  RTARAATNVPKIRIGPLFSPKLSNLGLMEELSLKDCRIPTTTPMEKDPISGLNFNNSSSN 82

Query: 185 PDPLVIAKLYEILEGISDRVEMHKNVGEQR 274
            DP+VI+KLY I+E ++DRVEMHKN+GEQR
Sbjct: 83  SDPMVISKLYAIMEIVADRVEMHKNIGEQR 112


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