BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046730
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    75   7e-12
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    73   3e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                72   4e-11
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    70   2e-10
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    69   5e-10

>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   SSRSLMQRDPISPYLFIIIMEFFTKFLKSQKA---FQYHPKCQKVGLVNVNFADDLFLLS 172
           SSR L Q   +SPYLF+I M+  +K L    A   F YHPKC+ +GL +++FADDL +LS
Sbjct: 652 SSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLS 711

Query: 173 GADEESMRLINYVLAEFGKMSGLHPNLTKSS 265
                S+  I  V  EF K SGL  +L KS+
Sbjct: 712 DGKIRSIERIIKVFDEFAKWSGLRISLEKST 742


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   SSRSLMQRDPISPYLFIIIMEFFTKFLKSQ---KAFQYHPKCQKVGLVNVNFADDLFLLS 172
           S+R L Q   +SPYLF+I M+  +K L      + F YHPKC+ +GL +++FADDL +LS
Sbjct: 540 SARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILS 599

Query: 173 GADEESMRLINYVLAEFGKMSGLHPNLTKSS 265
                S+  I  VL EF K SGL  ++ KS+
Sbjct: 600 DGKVRSIDGIVKVLYEFAKWSGLKISMEKST 630


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   SSRSLMQRDPISPYLFIIIMEFFTKFLKSQ---KAFQYHPKCQKVGLVNVNFADDLFLLS 172
           S R L Q   +SPYLF+I M+  +K L      + F +HPKCQ++GL +++FADDL +LS
Sbjct: 299 SKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLS 358

Query: 173 GADEESMRLINYVLAEFGKMSGLHPNLTKSS 265
                S+  I  V  EF K SGL  +L KS+
Sbjct: 359 DGKTRSIEGILEVFDEFCKRSGLRISLEKST 389


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
 Frame = +2

Query: 2   SSRSLMQRDPISPYLFIIIMEFFTKFLKS---QKAFQYHPKCQKVGLVNVNFADDLFLLS 172
           S+R L Q   +SPYLF++ M   +K L     Q+ F YHP+C+++GL +++FADDL +LS
Sbjct: 34  STRGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLS 93

Query: 173 GADEESMRLINYVLAEFGKMSGLHPNLTKSS 265
                S+  I  V   F K SGL  ++ KS+
Sbjct: 94  DGKVRSIEGIVEVFETFAKCSGLRISMEKST 124


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
 Frame = +2

Query: 2    SSRSLMQRDPISPYLFIIIMEFFTKFLKSQKA---FQYHPKCQKVGLVNVNFADDLFLLS 172
            + R + Q DP+SP LF+IIME+  + L   +    F +H KC+K+GL N+ FADD+ L  
Sbjct: 961  AKRGIRQGDPMSPMLFVIIMEYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFC 1020

Query: 173  GADEESMRLINYVLAEFGKMSGLHPNLTK 259
              D +S+ ++   + +F   +GL  N  K
Sbjct: 1021 RGDSKSVSMMMETIRKFSDSTGLKVNPAK 1049