BLASTX nr result

ID: Lithospermum22_contig00046717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046717
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               59   3e-07
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    59   3e-07
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002335785.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/63 (38%), Positives = 42/63 (66%)
 Frame = +1

Query: 169 KKSRMQWYKEGDASTSFFHKSMRMHHSQHRIVSMRDKDGVLVTDFEQVKGIIVDFYKNLF 348
           +KSR++W  EGDA+T FFH+++  H + + I  +R  DG  V + +Q+KG+++ +Y +L 
Sbjct: 396 QKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLL 455

Query: 349 AAP 357
             P
Sbjct: 456 GIP 458


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/63 (38%), Positives = 42/63 (66%)
 Frame = +1

Query: 169 KKSRMQWYKEGDASTSFFHKSMRMHHSQHRIVSMRDKDGVLVTDFEQVKGIIVDFYKNLF 348
           +KSR++W  EGDA+T FFH+++  H + + I  +R  DG  V + +Q+KG+++ +Y +L 
Sbjct: 353 QKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYSHLL 412

Query: 349 AAP 357
             P
Sbjct: 413 GIP 415


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/73 (30%), Positives = 45/73 (61%)
 Frame = +1

Query: 169 KKSRMQWYKEGDASTSFFHKSMRMHHSQHRIVSMRDKDGVLVTDFEQVKGIIVDFYKNLF 348
           +K+R+QW   GD +TS+FHKS+   H++++++S+  +DG +V   E VK  ++ ++  + 
Sbjct: 321 QKARIQWLSLGDQNTSYFHKSVNGRHNRNKLLSLTREDGEVVEGHEAVKSEVIAYFHRVL 380

Query: 349 AAPQVDTCIEVEI 387
              Q+   +  E+
Sbjct: 381 GVDQMPRVLNEEV 393


>ref|XP_002335785.1| predicted protein [Populus trichocarpa] gi|222834756|gb|EEE73219.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 39/57 (68%)
 Frame = +1

Query: 169 KKSRMQWYKEGDASTSFFHKSMRMHHSQHRIVSMRDKDGVLVTDFEQVKGIIVDFYK 339
           KKSR+QW   GD ++ FF  S++  HS +RI+S+ D +G+ +TD  +VK  IV +++
Sbjct: 119 KKSRLQWLNLGDKNSKFFFNSVKGFHSCNRILSIHDDNGMCLTDAREVKDTIVSYFQ 175


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