BLASTX nr result

ID: Lithospermum22_contig00046697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046697
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   194   5e-48
ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   194   5e-48
ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002534470.1| transcription initiation factor iib, putativ...   189   3e-46

>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/108 (85%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 MGDAYCTDCKKNTEVVVDHSAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG 145
           M DA+CTDCKKNTEVV DHSAGDTVCSECGLVLES SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 144 GPSNPLLTDGGLSTVISKPNGTTSDFLTTSLGRWQNRGGGNPDRGLIV 1
           GPSNPLLTDGGLSTVI+KPNG + DFL++SLGRWQNR G NPDRGLI+
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNR-GSNPDRGLIL 107


>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  194 bits (494), Expect = 5e-48
 Identities = 92/108 (85%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 MGDAYCTDCKKNTEVVVDHSAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG 145
           M DA+CTDCKKNTEVV DHSAGDTVCSECGLVLES SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 144 GPSNPLLTDGGLSTVISKPNGTTSDFLTTSLGRWQNRGGGNPDRGLIV 1
           GPSNPLLTDGGLSTVI+KPNG + DFL++SLGRWQNR G NPDRGLI+
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNR-GSNPDRGLIL 107


>ref|XP_002308933.1| predicted protein [Populus trichocarpa] gi|222854909|gb|EEE92456.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  191 bits (486), Expect = 4e-47
 Identities = 90/108 (83%), Positives = 100/108 (92%)
 Frame = -1

Query: 324 MGDAYCTDCKKNTEVVVDHSAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG 145
           MGDA+C+DCKK+TEVV DHSAGDTVCSECGLVLES SIDETSEWR FA+ESGD+DP RVG
Sbjct: 1   MGDAFCSDCKKHTEVVCDHSAGDTVCSECGLVLESHSIDETSEWRIFANESGDNDPVRVG 60

Query: 144 GPSNPLLTDGGLSTVISKPNGTTSDFLTTSLGRWQNRGGGNPDRGLIV 1
           GP+NPLLTDGGLSTVI+KPNG + DFL+TSLGRWQNR G NPDRGLI+
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGASGDFLSTSLGRWQNR-GSNPDRGLIL 107


>ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|222867352|gb|EEF04483.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  189 bits (480), Expect = 2e-46
 Identities = 88/107 (82%), Positives = 100/107 (93%)
 Frame = -1

Query: 324 MGDAYCTDCKKNTEVVVDHSAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG 145
           MGDA+C+DCK++TEVV DHSAGDTVCSECGLVLES SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 144 GPSNPLLTDGGLSTVISKPNGTTSDFLTTSLGRWQNRGGGNPDRGLI 4
           GP+NPLLTDGGLSTVI+KPNG + +FL++SLGRWQNR G NPDRGLI
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNR-GSNPDRGLI 106


>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
           gi|223525233|gb|EEF27913.1| transcription initiation
           factor iib, putative [Ricinus communis]
          Length = 312

 Score =  189 bits (479), Expect = 3e-46
 Identities = 88/108 (81%), Positives = 99/108 (91%)
 Frame = -1

Query: 324 MGDAYCTDCKKNTEVVVDHSAGDTVCSECGLVLESRSIDETSEWRTFADESGDHDPNRVG 145
           MGDAYC+DCK+ TEVV DHSAGDTVCSECGLVLES SIDETSEWRTFA+ESGD+DP RVG
Sbjct: 1   MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 144 GPSNPLLTDGGLSTVISKPNGTTSDFLTTSLGRWQNRGGGNPDRGLIV 1
           GP+NPLL DGGLSTVI+KPNG + +FL++SLGRWQNR G NPDRGLI+
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNR-GSNPDRGLIL 107


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