BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046670
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    73   3e-11
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   2e-10
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 69   5e-10
ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcript...    68   7e-10
dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]            68   7e-10

>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/92 (39%), Positives = 56/92 (60%)
 Frame = -3

Query: 290 ELSRILGIPLGALLVRYLGIPLVSEQLCYGDCRMLIDDIRKKIDGWGNKHFGFVGRLILI 111
           E+ +     +G L VRYLG+PLVS++L   DC  LI+ +RKKI+ W ++   F GRL LI
Sbjct: 643 EIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLI 702

Query: 110 NTVIFGKENYLCQSVYLPAAMVKEIDGMVRLF 15
           ++ ++   N+   +  LP A ++EID +   F
Sbjct: 703 SSTLWSICNFWMAAFRLPRACIREIDKLCSAF 734


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/92 (34%), Positives = 54/92 (58%)
 Frame = -3

Query: 290  ELSRILGIPLGALLVRYLGIPLVSEQLCYGDCRMLIDDIRKKIDGWGNKHFGFVGRLILI 111
            +L+  + +P+G+L  RYLG+PL S++L +  C+ LID I  +  GW      + GRL L+
Sbjct: 743  QLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLV 802

Query: 110  NTVIFGKENYLCQSVYLPAAMVKEIDGMVRLF 15
             T+++  +NY  Q   LP  ++K ++   R F
Sbjct: 803  KTILYSMQNYWGQIFPLPKKLIKAVETTCRKF 834


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/82 (40%), Positives = 48/82 (58%)
 Frame = -3

Query: 260 GALLVRYLGIPLVSEQLCYGDCRMLIDDIRKKIDGWGNKHFGFVGRLILINTVIFGKENY 81
           G L VRYLG+PL+++Q+   D   L+D +R KI  W  +   + GRL LIN+VI    N+
Sbjct: 338 GQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNF 397

Query: 80  LCQSVYLPAAMVKEIDGMVRLF 15
              +  LPA  +KEI+ +   F
Sbjct: 398 WMSAYRLPAGCIKEIEKLCSAF 419


>ref|NP_189068.2| RNA-directed DNA polymerase (reverse transcriptase)-related protein
           [Arabidopsis thaliana] gi|332643359|gb|AEE76880.1|
           RNA-directed DNA polymerase (reverse
           transcriptase)-related protein [Arabidopsis thaliana]
          Length = 746

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -3

Query: 260 GALLVRYLGIPLVSEQLCYGDCRMLIDDIRKKIDGWGNKHFGFVGRLILINTVIFGKENY 81
           GAL VRYLG+PL+++++   D   L++ IR +I  W  +H  F GRL LI++VI    N+
Sbjct: 21  GALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNF 80

Query: 80  LCQSVYLPAAMVKEIDGMVRLF 15
              +  LP+A +KEID +   F
Sbjct: 81  WMSAFRLPSACIKEIDSICSSF 102


>dbj|BAD95408.1| hypothetical protein [Arabidopsis thaliana]
          Length = 478

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/82 (41%), Positives = 51/82 (62%)
 Frame = -3

Query: 260 GALLVRYLGIPLVSEQLCYGDCRMLIDDIRKKIDGWGNKHFGFVGRLILINTVIFGKENY 81
           GAL VRYLG+PL+++++   D   L++ IR +I  W  +H  F GRL LI++VI    N+
Sbjct: 21  GALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNF 80

Query: 80  LCQSVYLPAAMVKEIDGMVRLF 15
              +  LP+A +KEID +   F
Sbjct: 81  WMSAFRLPSACIKEIDSICSSF 102