BLASTX nr result

ID: Lithospermum22_contig00046637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046637
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09

>ref|XP_003535694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 634

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/67 (47%), Positives = 41/67 (61%)
 Frame = -2

Query: 202 SEQGPYDTAFSIFKNLKNSIFSPNDLTFSFLLKACAKASNGPVYVNQIQTHVVKFGFIDD 23
           ++ G +  A S+F  LK    SPNDLTFSFL K C +  +   YV QI  H+ K GF+ D
Sbjct: 106 AQDGHFFHALSVFNYLKRRSLSPNDLTFSFLFKPCFRTKD-VRYVEQIHAHIQKIGFLSD 164

Query: 22  LYVCNGL 2
            +VCNGL
Sbjct: 165 PFVCNGL 171


Top