BLASTX nr result

ID: Lithospermum22_contig00046634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046634
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [S...    56   3e-06
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S...    56   3e-06
ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [S...    55   6e-06

>ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
           gi|241941643|gb|EES14788.1| hypothetical protein
           SORBIDRAFT_07g007880 [Sorghum bicolor]
          Length = 388

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4   RKDKGGKKFFLAKAILNINQPIRRVVNFKVGDALGAGYLA--YERLPYLCFHCGLLGHLI 177
           R  K    F  A+  + I++P+RR V  ++  +    + A  YERLP+ CF CG++GH  
Sbjct: 185 RDGKASGAFLRARLAIEIDKPLRRGVLLRMSRSEEPKWFAVQYERLPFFCFACGIMGHSE 244

Query: 178 RQCPNLPEGATPQNHVVYGLWIKAPAEKSR 267
            +CPN P        + + + ++AP EK R
Sbjct: 245 IECPN-PVPRNEYGKLPFDVQLRAPEEKRR 273


>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
           gi|241931675|gb|EES04820.1| hypothetical protein
           SORBIDRAFT_04g008547 [Sorghum bicolor]
          Length = 599

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = +1

Query: 4   RKDKGGKKFFLAKAILNINQPIRRVVNFKVGDALGAGYLA--YERLPYLCFHCGLLGHLI 177
           R  K    F  A+  + I++P+RR V  ++  +    + A  YERLP+ CF CG++GH  
Sbjct: 124 RDGKASGAFLRARLAIEIDKPLRRGVLLRMSRSEEPKWFAVQYERLPFFCFACGIMGHSE 183

Query: 178 RQCPNLPEGATPQNHVVYGLWIKAPAEKSR 267
            +CPN P        + + + ++AP EK R
Sbjct: 184 IECPN-PVPRNEYGKLPFDVQLRAPEEKRR 212


>ref|XP_002445703.1| hypothetical protein SORBIDRAFT_07g024435 [Sorghum bicolor]
           gi|241942053|gb|EES15198.1| hypothetical protein
           SORBIDRAFT_07g024435 [Sorghum bicolor]
          Length = 785

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
 Frame = +1

Query: 13  KGGKKFFLAKAILNINQPIRRVVNFKVGDALGAGYLA--YERLPYLCFHCGLLGHLIRQC 186
           K    F  A+  + I++P+RR +  +V       +    YE+LPY+CF CG++GH   +C
Sbjct: 181 KASGAFLRARVSMEIDKPVRRGILLRVNKTDEPRWFQAQYEKLPYMCFACGIIGHSDMEC 240

Query: 187 PNLPEGATPQNHVVYGLWIKAPAEKSR 267
           P  P        + Y + ++AP EK R
Sbjct: 241 PT-PVARDEDGKLPYDVNLRAPEEKKR 266


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