BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046630
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indi...    76   3e-12
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    72   8e-12
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    72   8e-12
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g...    72   2e-11
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...    73   3e-11

>gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indica Group]
          Length = 1143

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 33/96 (34%), Positives = 59/96 (61%)
 Frame = -1

Query: 373 LKDGDKNSKFFHVSAIIRRRKNMLMGIEEKVGEWKVGTAEVEEVVLDYFGDMFKANDNCD 194
           LK+GD+N++FFH  A+ R +KN +  + +  G  +  T  +E++  +YF  ++ A+ N D
Sbjct: 277 LKEGDRNTRFFHSRAVWRAKKNKITKLRDAEGTVQKSTTVLEDMATEYFEKVYTADPNLD 336

Query: 193 PDVTMDTVDRKVTEEMNSRLTKKVTSEEVKRAVFEM 86
           P+     +  KVTEEMN++L      EE+ +A+F++
Sbjct: 337 PECVTRLIQEKVTEEMNAKLCADFNDEEIAQALFQI 372


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 72.4 bits (176), Expect(2) = 8e-12
 Identities = 34/96 (35%), Positives = 55/96 (57%)
 Frame = -1

Query: 373  LKDGDKNSKFFHVSAIIRRRKNMLMGIEEKVGEWKVGTAEVEEVVLDYFGDMFKANDNCD 194
            LK+GD+N+KFFH     R +KN +  + +  G +      +E++   YF DMF A+ N D
Sbjct: 761  LKEGDRNTKFFHNRVAWRAKKNKITKLRDAAGTFHRSKMVMEQMATQYFKDMFTADPNLD 820

Query: 193  PDVTMDTVDRKVTEEMNSRLTKKVTSEEVKRAVFEM 86
                   +  KVTEEMN+RL  + + +E+  A+F++
Sbjct: 821  HSPVTRLIQPKVTEEMNNRLCSEFSEDEIANALFQI 856



 Score = 22.3 bits (46), Expect(2) = 8e-12
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 69  WHIIYVDIVKAVNSFFFS 16
           W  I  DIV+AV  FF S
Sbjct: 876 WGCIKNDIVRAVKEFFHS 893


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 72.4 bits (176), Expect(2) = 8e-12
 Identities = 34/96 (35%), Positives = 55/96 (57%)
 Frame = -1

Query: 373  LKDGDKNSKFFHVSAIIRRRKNMLMGIEEKVGEWKVGTAEVEEVVLDYFGDMFKANDNCD 194
            LK+GD+N+KFFH     R +KN +  + +  G +      +E++   YF DMF A+ N D
Sbjct: 733  LKEGDRNTKFFHNRVAWRAKKNKITKLRDAAGTFHRSKMVMEQMATQYFKDMFTADPNLD 792

Query: 193  PDVTMDTVDRKVTEEMNSRLTKKVTSEEVKRAVFEM 86
                   +  KVTEEMN+RL  + + +E+  A+F++
Sbjct: 793  HSPVTRLIQPKVTEEMNNRLCSEFSEDEIANALFQI 828



 Score = 22.3 bits (46), Expect(2) = 8e-12
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 69  WHIIYVDIVKAVNSFFFS 16
           W  I  DIV+AV  FF S
Sbjct: 848 WGCIKNDIVRAVKEFFHS 865


>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
           gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
           Japonica Group]
          Length = 1011

 Score = 71.6 bits (174), Expect(2) = 2e-11
 Identities = 32/96 (33%), Positives = 58/96 (60%)
 Frame = -1

Query: 373 LKDGDKNSKFFHVSAIIRRRKNMLMGIEEKVGEWKVGTAEVEEVVLDYFGDMFKANDNCD 194
           LK+GD+N++FFH  A+ R +KN+++ + +  G  +  T  +E++   YF +M+ A+   D
Sbjct: 37  LKEGDRNTRFFHSKAVWRAKKNIIVRLRDSGGTVQNSTTVMEDMATKYFQEMYTADSTLD 96

Query: 193 PDVTMDTVDRKVTEEMNSRLTKKVTSEEVKRAVFEM 86
               +  +  KVT EMN  L ++ + EE+  AVF++
Sbjct: 97  HTQIIHLIQEKVTPEMNESLCREFSEEEIATAVFQI 132



 Score = 21.6 bits (44), Expect(2) = 2e-11
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 69  WHIIYVDIVKAVNSFFFS 16
           W ++  DIV+ V +FF +
Sbjct: 152 WGVLKEDIVRVVKTFFLT 169


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/98 (39%), Positives = 59/98 (60%)
 Frame = -1

Query: 373  LKDGDKNSKFFHVSAIIRRRKNMLMGIEEKVGEWKVGTAEVEEVVLDYFGDMFKANDNCD 194
            LK GD+NS FFH + I RR+ N ++ +++  G W    A+V    LDYF  ++++N    
Sbjct: 954  LKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQ 1013

Query: 193  PDVTMDTVDRKVTEEMNSRLTKKVTSEEVKRAVFEMSA 80
             +  +D VD  VT EMN  L+  V+  EVK+AVF++ A
Sbjct: 1014 WEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGA 1051