BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046593
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                49   2e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    49   2e-10
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    47   7e-10
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    47   2e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    46   3e-09

>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 48.5 bits (114), Expect(2) = 2e-10
 Identities = 20/48 (41%), Positives = 35/48 (72%)
 Frame = +1

Query: 118 VSFADDMMIVCGANTKSVENVSKAIDYFGRSYGLKMNLGKSTMYIAGL 261
           +SFADD+M++    T+S+E + +  D F +  GL+++L KST+Y+AG+
Sbjct: 348 LSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGV 395



 Score = 41.6 bits (96), Expect(2) = 2e-10
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = +3

Query: 3   LSPYLFIIVMEVFAEMMIKKAMQFEVKFHLKCRELGIT 116
           LSPYLF+I M+V ++M+ K A   +  FH KC+ LG+T
Sbjct: 309 LSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLT 346


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 49.3 bits (116), Expect(2) = 2e-10
 Identities = 21/48 (43%), Positives = 34/48 (70%)
 Frame = +1

Query: 118 VSFADDMMIVCGANTKSVENVSKAIDYFGRSYGLKMNLGKSTMYIAGL 261
           +SFADD+M++     +S+E + K  D F +  GL+++L KST+Y+AGL
Sbjct: 701 LSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGL 748



 Score = 40.4 bits (93), Expect(2) = 2e-10
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +3

Query: 3   LSPYLFIIVMEVFAEMMIKKAMQFEVKFHLKCRELGIT 116
           LSPYLF+I M+V ++M+ K A      +H KC+ +G+T
Sbjct: 662 LSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLT 699


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 47.0 bits (110), Expect(2) = 7e-10
 Identities = 19/48 (39%), Positives = 33/48 (68%)
 Frame = +1

Query: 124 FADDMMIVCGANTKSVENVSKAIDYFGRSYGLKMNLGKSTMYIAGLGD 267
           FADD+MI+     +SV+ + + ++ F +  GLK+N+ K+T+Y AG+ D
Sbjct: 620 FADDLMILTDGKVRSVDGIVEVMNLFAKRSGLKINMEKTTLYTAGVSD 667



 Score = 41.2 bits (95), Expect(2) = 7e-10
 Identities = 19/38 (50%), Positives = 26/38 (68%)
 Frame = +3

Query: 3   LSPYLFIIVMEVFAEMMIKKAMQFEVKFHLKCRELGIT 116
           LSPYLF+I MEV ++M+ + A      FH KC+ LG+T
Sbjct: 579 LSPYLFVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLT 616


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 47.0 bits (110), Expect(2) = 2e-09
 Identities = 20/48 (41%), Positives = 34/48 (70%)
 Frame = +1

Query: 118 VSFADDMMIVCGANTKSVENVSKAIDYFGRSYGLKMNLGKSTMYIAGL 261
           +SFADD+MI+     +S++ + K +  F +  GLK+++ KSTMY+AG+
Sbjct: 589 LSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGV 636



 Score = 39.7 bits (91), Expect(2) = 2e-09
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +3

Query: 3   LSPYLFIIVMEVFAEMMIKKAMQFEVKFHLKCRELGIT 116
           LSPYLF+I M+V ++M+ K     +  +H KCR +G+T
Sbjct: 550 LSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLT 587


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 45.8 bits (107), Expect(2) = 3e-09
 Identities = 19/48 (39%), Positives = 32/48 (66%)
 Frame = +1

Query: 124 FADDMMIVCGANTKSVENVSKAIDYFGRSYGLKMNLGKSTMYIAGLGD 267
           FADD+MI+     +SV+ + K ++ F    GLK+ + K+T+Y+AG+ D
Sbjct: 424 FADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSD 471



 Score = 40.4 bits (93), Expect(2) = 3e-09
 Identities = 18/38 (47%), Positives = 26/38 (68%)
 Frame = +3

Query: 3   LSPYLFIIVMEVFAEMMIKKAMQFEVKFHLKCRELGIT 116
           LSPYLF+I M+V + M+ K A   E  +H +C+ LG+T
Sbjct: 383 LSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLT 420