BLASTX nr result

ID: Lithospermum22_contig00046566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046566
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]   145   3e-33
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,...   136   2e-30
ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28

>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
            chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  159 bits (402), Expect = 2e-37
 Identities = 75/146 (51%), Positives = 116/146 (79%)
 Frame = -1

Query: 458  EATSLIKLMLEKKVRPTMYLSTNTLKVLFKHRLKDRAFETFTSLHECGYRVNMEELVTFL 279
            E+ SL+KLMLE+++R  + LST+T+++L+K  L+D+AF T   L+E GY V MEELV+FL
Sbjct: 578  ESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFL 637

Query: 278  CQERKLVEAYELLLHSIKKEQTANLNTCNMVLTGLCKIGRISEAFKLYYEVIELKIPGQL 99
            CQ RKL+EA ++LL S++K Q+ +++ C+ V++GLCK  ++SEAF LYYE++E  +  +L
Sbjct: 638  CQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRL 697

Query: 98   GCLEDLRIALQAKGRLRDAEFLAKRM 21
             C EDLRI+L+A+GRL +A+F++K+M
Sbjct: 698  TCQEDLRISLEAEGRLNEAKFVSKKM 723


>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
          Length = 1024

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/136 (50%), Positives = 107/136 (78%)
 Frame = -1

Query: 428  EKKVRPTMYLSTNTLKVLFKHRLKDRAFETFTSLHECGYRVNMEELVTFLCQERKLVEAY 249
            E+++R  + LST+T+++L+K  L+D+AF T   L+E GY V MEELV+FLCQ RKL+EA 
Sbjct: 645  ERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLLEAQ 704

Query: 248  ELLLHSIKKEQTANLNTCNMVLTGLCKIGRISEAFKLYYEVIELKIPGQLGCLEDLRIAL 69
            ++LL S++K Q+ +++ C+ V++GLCK  ++SEAF LYYE++E  +  +L C EDLRI+L
Sbjct: 705  KMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISL 764

Query: 68   QAKGRLRDAEFLAKRM 21
            +A+GRL +A+F++K+M
Sbjct: 765  EAEGRLNEAKFVSKKM 780


>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1163

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/148 (47%), Positives = 103/148 (69%)
 Frame = -1

Query: 458  EATSLIKLMLEKKVRPTMYLSTNTLKVLFKHRLKDRAFETFTSLHECGYRVNMEELVTFL 279
            E+   I LMLE K+R  + LST+T+++LF   L+D+AF+    L+  GY V+MEEL+ FL
Sbjct: 569  ESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVVDMEELIGFL 628

Query: 278  CQERKLVEAYELLLHSIKKEQTANLNTCNMVLTGLCKIGRISEAFKLYYEVIELKIPGQL 99
               RK + A++LLL  ++K Q  +++ C+ V+ GLCK+ R SEAF LYYE++E      L
Sbjct: 629  SHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYELVEKGNNQPL 688

Query: 98   GCLEDLRIALQAKGRLRDAEFLAKRMVN 15
             CLE+LR+AL+A+GRL + +FL+KRM N
Sbjct: 689  RCLENLRVALEARGRLEEVKFLSKRMPN 716


>ref|XP_002326829.1| predicted protein [Populus trichocarpa] gi|222835144|gb|EEE73579.1|
           predicted protein [Populus trichocarpa]
          Length = 664

 Score =  134 bits (336), Expect = 1e-29
 Identities = 65/147 (44%), Positives = 102/147 (69%)
 Frame = -1

Query: 461 REATSLIKLMLEKKVRPTMYLSTNTLKVLFKHRLKDRAFETFTSLHECGYRVNMEELVTF 282
           RE+ S + LM+++K+R  + LST+T+++LF   L+ +AF+    L++ GY V+MEEL+ F
Sbjct: 509 RESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVDMEELIGF 568

Query: 281 LCQERKLVEAYELLLHSIKKEQTANLNTCNMVLTGLCKIGRISEAFKLYYEVIELKIPGQ 102
           +CQ  KL++A ++L   ++K    ++N CN+V+ GLCK+ R  EAF LYY ++E     Q
Sbjct: 569 ICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQ 628

Query: 101 LGCLEDLRIALQAKGRLRDAEFLAKRM 21
           L CLE LR AL+A GR  +A+F++KRM
Sbjct: 629 LSCLEGLRTALEAGGRSEEAKFVSKRM 655


>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/146 (41%), Positives = 100/146 (68%)
 Frame = -1

Query: 458 EATSLIKLMLEKKVRPTMYLSTNTLKVLFKHRLKDRAFETFTSLHECGYRVNMEELVTFL 279
           E+ SLI+LML+K +R  +  ST  +++LF   + D+AF+    L+  GY V MEEL+ +L
Sbjct: 562 ESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYL 621

Query: 278 CQERKLVEAYELLLHSIKKEQTANLNTCNMVLTGLCKIGRISEAFKLYYEVIELKIPGQL 99
           C  RK+++  +LLL S++  Q  +++ CN V+  LC+I ++SEAF LYY+++E+ +  QL
Sbjct: 622 CHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQL 681

Query: 98  GCLEDLRIALQAKGRLRDAEFLAKRM 21
            C   L+++L+A  +L +AEF++KRM
Sbjct: 682 SCQNQLKVSLEAGEKLEEAEFVSKRM 707


Top