BLASTX nr result
ID: Lithospermum22_contig00046554
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00046554
(268 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37461.3| unnamed protein product [Vitis vinifera] 125 3e-27
ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat... 125 3e-27
ref|XP_002322117.1| predicted protein [Populus trichocarpa] gi|2... 117 7e-25
ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing pr... 106 2e-21
ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing prote... 106 2e-21
>emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 125 bits (315), Expect = 3e-27
Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N++TYSCLIDGYFK +AFELYE+ML + +SPNIVSYSILIDGLCKKGL+EEASLAF
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAF 753
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
A+ L P++IAY ILI GYCKVG+ E
Sbjct: 754 QCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
+VV +S ++D Y ++ + A E+Y ML ISPN+V+YSILI+GLC+ G + EA F
Sbjct: 344 DVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVF 403
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
L GL P+++ Y+ LI G+CK
Sbjct: 404 GQILKQGLEPSVLTYSSLIDGFCK 427
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEM-LNNISPNIVSYSILIDGLCKKGLIEEASLAF 177
++VTY+ +I GY L + A +L+E + PN ++++ILID CK G +++A L F
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
L+ G PN++ Y+ LI GY K
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFK 707
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N+VT+S LI+ Y K L ++ AF LY M+ I P++V YSILI+GL + G +EE + F
Sbjct: 274 NLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF 333
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
AL G+ +++ ++ ++ Y +VG
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVG 359
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEM-LNNISPNIVSYSILIDGLCKKGLIEEASLAF 177
N ++ LIDG F+L + ++Y M + + P++V+Y++L+ GL ++G ++EA F
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
+ L G P+ I Y LI G+CK
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCK 567
>ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 125 bits (315), Expect = 3e-27
Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N++TYSCLIDGYFK +AFELYE+ML + +SPNIVSYSILIDGLCKKGL+EEASLAF
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAF 753
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
A+ L P++IAY ILI GYCKVG+ E
Sbjct: 754 QCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
+VV +S ++D Y ++ + A E+Y ML ISPN+V+YSILI+GLC+ G + EA F
Sbjct: 344 DVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVF 403
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
L GL P+++ Y+ LI G+CK
Sbjct: 404 GQILKQGLEPSVLTYSSLIDGFCK 427
Score = 63.5 bits (153), Expect = 2e-08
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEM-LNNISPNIVSYSILIDGLCKKGLIEEASLAF 177
++VTY+ +I GY L + A +L+E + PN ++++ILID CK G +++A L F
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
L+ G PN++ Y+ LI GY K
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFK 707
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N+VT+S LI+ Y K L ++ AF LY M+ I P++V YSILI+GL + G +EE + F
Sbjct: 274 NLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF 333
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
AL G+ +++ ++ ++ Y +VG
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVG 359
Score = 60.1 bits (144), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEM-LNNISPNIVSYSILIDGLCKKGLIEEASLAF 177
N ++ LIDG F+L + ++Y M + + P++V+Y++L+ GL ++G ++EA F
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543
Query: 178 YFALDSGLFPNMIAYAILIHGYCK 249
+ L G P+ I Y LI G+CK
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCK 567
>ref|XP_002322117.1| predicted protein [Populus trichocarpa] gi|222869113|gb|EEF06244.1|
predicted protein [Populus trichocarpa]
Length = 854
Score = 117 bits (294), Expect = 7e-25
Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGM-NNAFELYEEML-NNISPNIVSYSILIDGLCKKGLIEEASLA 174
N+VTYSCLI GYFK M + +LY EML NNI+PNIVSYSILIDGLCK+GL++EAS A
Sbjct: 726 NLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCA 785
Query: 175 FYFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
F ALD L P++IAY ILI GYCKVG+ E
Sbjct: 786 FRCALDKHLLPDVIAYTILIRGYCKVGRLTE 816
Score = 69.7 bits (169), Expect = 2e-10
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
+VV +S +D Y K+ + ++Y+ MLN ISPN+VS SILI G C+ G I EA F
Sbjct: 376 DVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLF 435
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
L G P+++ Y+ LI G+CK G
Sbjct: 436 VQILKLGFEPSILTYSALIAGFCKSG 461
Score = 69.3 bits (168), Expect = 3e-10
Identities = 32/85 (37%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
+++TYS LI G+ K + + F LYE+M+ P+ + YS+LI+GLCK+GL+ +A F
Sbjct: 446 SILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFF 505
Query: 178 YFALDSGLFPNMIAYAILIHGYCKV 252
+ A++ GL PN+ L+ +C++
Sbjct: 506 FQAVNRGLSPNVFTLNTLLDSFCRL 530
Score = 67.8 bits (164), Expect = 9e-10
Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
NVVT+S LID Y K ++ AF L++ M N ++P+++ YSILIDGL K G +E+
Sbjct: 306 NVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLL 365
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
ALD G+ +++ ++ + Y K+G
Sbjct: 366 LVALDKGIKLDVVGFSSAMDAYVKIG 391
Score = 63.5 bits (153), Expect = 2e-08
Identities = 30/90 (33%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
+V T++ +I Y +++A +L+ +M + + PN ++++ILID C++G +++A L F
Sbjct: 656 DVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMF 715
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
L+ G PN++ Y+ LIHGY K +E
Sbjct: 716 SKMLEEGPEPNLVTYSCLIHGYFKSQSMME 745
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEM-LNNISPNIVSYSILIDGLCKKGLIEEASLAF 177
NV T + L+D + +L + A ++Y M + NI + V+Y+ILI G + G ++EA + F
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGK 258
+ L P++I Y LI G CK+ K
Sbjct: 576 FQMLKKDFKPDVITYCTLIDGLCKLKK 602
>ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|332193283|gb|AEE31404.1| pentatricopeptide
(PPR) repeat-containing protein [Arabidopsis thaliana]
Length = 811
Score = 106 bits (264), Expect = 2e-21
Identities = 50/90 (55%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N VTY CL+D + K + + +F+L+EEM ISP+IVSYSI+IDGLCK+G ++EA+ F
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
+ A+D+ L P+++AYAILI GYCKVG+ VE
Sbjct: 736 HQAIDAKLLPDVVAYAILIRGYCKVGRLVE 765
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEML-NNISPNIVSYSILIDGLCKKGLIEEASLAF 177
+VV +S ID Y K + A +Y+ ML ISPN+V+Y+ILI GLC+ G I EA +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
L G+ P+++ Y+ LI G+CK G
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCG 440
Score = 65.9 bits (159), Expect = 3e-09
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLN-NISPNIVSYSILIDGLCKKGLIEEASLAF 177
++VTYS LIDG+ K + + F LYE+M+ P++V Y +L+DGL K+GL+ A
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
L + N++ + LI G+C++ +F E
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 NVVTYSCLIDGYFK--LLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASL 171
+++ YS LIDGYFK +LGM + +L+ + L+ + ++V +S ID K G + AS+
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGH--KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 172 AFYFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
+ L G+ PN++ Y ILI G C+ G+ E
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
NVVTY+ LI G + + AF +Y ++L + P+IV+YS LIDG CK G + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
+ G P+++ Y +L+ G K G
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQG 475
>ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana] gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g31840 gi|332193282|gb|AEE31403.1|
pentatricopeptide (PPR) repeat-containing protein
[Arabidopsis thaliana]
Length = 840
Score = 106 bits (264), Expect = 2e-21
Identities = 50/90 (55%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
N VTY CL+D + K + + +F+L+EEM ISP+IVSYSI+IDGLCK+G ++EA+ F
Sbjct: 705 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 764
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
+ A+D+ L P+++AYAILI GYCKVG+ VE
Sbjct: 765 HQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Score = 67.0 bits (162), Expect = 2e-09
Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEML-NNISPNIVSYSILIDGLCKKGLIEEASLAF 177
+VV +S ID Y K + A +Y+ ML ISPN+V+Y+ILI GLC+ G I EA +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
L G+ P+++ Y+ LI G+CK G
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCG 440
Score = 65.9 bits (159), Expect = 3e-09
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLN-NISPNIVSYSILIDGLCKKGLIEEASLAF 177
++VTYS LIDG+ K + + F LYE+M+ P++V Y +L+DGL K+GL+ A
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
L + N++ + LI G+C++ +F E
Sbjct: 485 VKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Score = 58.9 bits (141), Expect = 4e-07
Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 1 NVVTYSCLIDGYFK--LLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASL 171
+++ YS LIDGYFK +LGM + +L+ + L+ + ++V +S ID K G + AS+
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGH--KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASV 377
Query: 172 AFYFALDSGLFPNMIAYAILIHGYCKVGKFVE 267
+ L G+ PN++ Y ILI G C+ G+ E
Sbjct: 378 VYKRMLCQGISPNVVTYTILIKGLCQDGRIYE 409
Score = 55.8 bits (133), Expect = 3e-06
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 NVVTYSCLIDGYFKLLGMNNAFELYEEMLNN-ISPNIVSYSILIDGLCKKGLIEEASLAF 177
NVVTY+ LI G + + AF +Y ++L + P+IV+YS LIDG CK G + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 178 YFALDSGLFPNMIAYAILIHGYCKVG 255
+ G P+++ Y +L+ G K G
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQG 475