BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046529
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                 97   2e-38
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...    97   5e-37
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    91   8e-37
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    99   3e-35
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]    95   4e-35

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 96.7 bits (239), Expect(2) = 2e-38
 Identities = 59/166 (35%), Positives = 81/166 (48%)
 Frame = -3

Query: 709  SSLFVFSRAGIRLIMLVYVDDILVTGNCSRAVSSFIPALNARFVTRDLGDLNFFLVLRLS 530
            +SLF+     I  I LVYVDDI++TG+      S I  L   F  +DLGD+N+FL + + 
Sbjct: 1325 TSLFIKRDTSITFI-LVYVDDIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVH 1383

Query: 529  LVQMEVCFFLSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEVAPHPSDFRQIVGSLQ 350
                 +                                   +  +   P+ +R  VG+LQ
Sbjct: 1384 KSDQGLLLH-QAKYALDLLKKTDMLGAKPCATPVSTSKLDHSGTLLSDPTSYRSTVGALQ 1442

Query: 349  HLLLTCSDLSFVVNNVCQHMHNPQAEHMIMVKRILRYVKSTPDLGL 212
            +L  T  DL+F VN VCQ+MH+PQ  H+  VKRILRY+K T DLGL
Sbjct: 1443 YLTWTRPDLAFAVNQVCQYMHSPQTIHLQAVKRILRYLKGTVDLGL 1488



 Score = 88.6 bits (218), Expect(2) = 2e-38
 Identities = 40/61 (65%), Positives = 49/61 (80%)
 Frame = -1

Query: 183  AFSDADWAGSSIDRHSTGGYLVYFGPNLVSWQSKK*KTVARSFTESEYKALANCAAEITW 4
            A+SDADWAG  +DR ST GY V+ G NL+SW +KK  TVARS TE+EY++LAN AAEITW
Sbjct: 1499 AWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITW 1558

Query: 3    L 1
            +
Sbjct: 1559 V 1559


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score = 97.1 bits (240), Expect(2) = 5e-37
 Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 5/176 (2%)
 Frame = -3

Query: 709  SSLFVFSRAGIRLIMLVYVDDILVTGNCSRAVSSFIPALNARFVTRDLGDLNFFLVLRLS 530
            +SLF +++   ++ +LVYVDDI+V  + S AV++ +  L   F  +DLGDL++FL + + 
Sbjct: 560  TSLFFYNKGHHKMFVLVYVDDIIVASSSSPAVNALLKDLEKDFALKDLGDLHYFLGIEVK 619

Query: 529  LVQMEVCFFLSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEVAPH--PSD---FRQI 365
                 +   LS                              + E+     PSD   +R I
Sbjct: 620  RTPQTL--LLSQERYTTELLERVNMTSCKPVSTPLSTAEKLSVEIGDELGPSDVTQYRSI 677

Query: 364  VGSLQHLLLTCSDLSFVVNNVCQHMHNPQAEHMIMVKRILRYVKSTPDLGLVLIPS 197
            VG+LQ+L LT  D+S+ VN VCQ +  P   H   VKRILRY+K T DLGL ++ S
Sbjct: 678  VGALQYLTLTRPDISYSVNKVCQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKS 733



 Score = 84.0 bits (206), Expect(2) = 5e-37
 Identities = 42/70 (60%), Positives = 50/70 (71%), Gaps = 9/70 (12%)
 Frame = -1

Query: 183 AFSDADWAGSS---------IDRHSTGGYLVYFGPNLVSWQSKK*KTVARSFTESEYKAL 31
           AFSDADWAGS           DR STGG+ V+FG NL+SW ++K  TV+RS TE+EYKAL
Sbjct: 740 AFSDADWAGSVDDRRSTGGFADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKAL 799

Query: 30  ANCAAEITWL 1
           AN AAEI W+
Sbjct: 800 ANAAAEIIWV 809


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 91.3 bits (225), Expect(2) = 8e-37
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = -1

Query: 183  AFSDADWAGSSIDRHSTGGYLVYFGPNLVSWQSKK*KTVARSFTESEYKALANCAAEITW 4
            AFSDADWAG   DR STGGY ++ GPNL+SW SKK  TV+RS TE+EYKA+AN  AE+ W
Sbjct: 1281 AFSDADWAGCPDDRKSTGGYALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIW 1340

Query: 3    L 1
            L
Sbjct: 1341 L 1341



 Score = 89.0 bits (219), Expect(2) = 8e-37
 Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 3/174 (1%)
 Frame = -3

Query: 706  SLFVFSRAGIRLIMLVYVDDILVTGNCSRAVSSFIPALNARFVTRDLGDLNFFLVLRLSL 527
            SLF+++     + +LVYVDDI++TG+   A+ + +  L   F  +DLGDL++FL + +  
Sbjct: 1102 SLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVLAKLKDDFAIKDLGDLHYFLGIEVHR 1161

Query: 526  VQ--MEVCFFLSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEVAPHPSD-FRQIVGS 356
                + +C                                 + + ++P  +  +R +VG+
Sbjct: 1162 KGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATSEKLSASAGTLLSPEETTKYRSVVGA 1221

Query: 355  LQHLLLTCSDLSFVVNNVCQHMHNPQAEHMIMVKRILRYVKSTPDLGLVLIPSV 194
            LQ+L LT  DLS+ +N VCQ +H P   H   VKRILR ++ T  LGL + PS+
Sbjct: 1222 LQYLTLTRPDLSYAINRVCQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSL 1275


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 99.0 bits (245), Expect(2) = 3e-35
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
 Frame = -3

Query: 709  SSLFVFSRAGIRLIMLVYVDDILVTGNCSRAVSSFIPALNARFVTRDLGDLNFFLVLRLS 530
            +SLF++      +  LVYVDD+LVTGNCS+++  FI AL  RF  +DLG L++FL +  +
Sbjct: 1073 TSLFIYQXRSATIYFLVYVDDLLVTGNCSQSIRRFIDALAHRFSLKDLGPLSYFLGVEGA 1132

Query: 529  LVQMEVCFFLSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXSASEVAP--HPSDFRQIVGS 356
            +   +  F                                + ++ +P  + + FR ++G 
Sbjct: 1133 ISTSDGMFLSQHQYVRDLLAKFNLEGIKDSSTPMSSTGHLTLNDGSPPXNATQFRSLIGG 1192

Query: 355  LQHLLLTCSDLSFVVNNVCQHMHNPQAEHMIMVKRILRYVKSTPDLGL 212
            LQ+L LT  D++F VN + Q MH P   H    KR+LRY+K T  LGL
Sbjct: 1193 LQYLQLTRLDIAFAVNKLAQFMHAPTQTHWTAAKRLLRYLKHTIHLGL 1240



 Score = 75.9 bits (185), Expect(2) = 3e-35
 Identities = 35/67 (52%), Positives = 49/67 (73%)
 Frame = -1

Query: 201  PP*TFQAFSDADWAGSSIDRHSTGGYLVYFGPNLVSWQSKK*KTVARSFTESEYKALANC 22
            PP   +A+SDADWAG      ST  ++++ G + +SW SKK KTVARS TE+EY+A+A+ 
Sbjct: 1258 PPLDLRAYSDADWAGDPDSYKSTTAFVLFLGGHPISWCSKKQKTVARSSTEAEYRAVAST 1317

Query: 21   AAEITWL 1
            AAE+TW+
Sbjct: 1318 AAEVTWV 1324


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score = 94.7 bits (234), Expect(2) = 4e-35
 Identities = 60/171 (35%), Positives = 85/171 (49%), Gaps = 3/171 (1%)
 Frame = -3

Query: 709  SSLFVFSRAGIRLIMLVYVDDILVTGNCSRAVSSFIPALNARFVTRDLGDLNFFLVLRLS 530
            +SLFV    G  +  LVYVDD+++TG+    V+ +I  L  RF  +DLG L++FL   + 
Sbjct: 832  TSLFVLKFRGHLVYFLVYVDDLIITGDDEHLVNRYIHLLANRFSLKDLGKLSYFL--GVE 889

Query: 529  LVQMEVCFFLSTNXXXXXXXXXXXXXXXXXXXXXXXXXXXSA---SEVAPHPSDFRQIVG 359
            +V     F LS                              +    +    P++FR +VG
Sbjct: 890  IVPNSQGFLLSQRRYLLDLLARTHMSEAKPVQTPLPSGTKISLHSGDKLSDPTEFRAVVG 949

Query: 358  SLQHLLLTCSDLSFVVNNVCQHMHNPQAEHMIMVKRILRYVKSTPDLGLVL 206
            SLQ+LLLT  D++F  N + Q MH P  EH  +VKR+LRY+  TPD  L L
Sbjct: 950  SLQYLLLTRLDIAFAANKLSQFMHTPTTEHWTLVKRLLRYLCGTPDHSLQL 1000



 Score = 79.7 bits (195), Expect(2) = 4e-35
 Identities = 36/61 (59%), Positives = 45/61 (73%)
 Frame = -1

Query: 183  AFSDADWAGSSIDRHSTGGYLVYFGPNLVSWQSKK*KTVARSFTESEYKALANCAAEITW 4
            A+SDADWAG   D  STG Y+VY G N +SW SKK K +ARS TE+EY+ +AN AAE+ W
Sbjct: 1017 AYSDADWAGDPDDFSSTGAYIVYLGRNPISWSSKKQKNIARSSTEAEYRFVANTAAELNW 1076

Query: 3    L 1
            +
Sbjct: 1077 V 1077