BLASTX nr result

ID: Lithospermum22_contig00046506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046506
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...   115   4e-31
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...   112   4e-30
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             107   4e-28
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              107   4e-28
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   103   1e-27

>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  115 bits (288), Expect(2) = 4e-31
 Identities = 53/110 (48%), Positives = 72/110 (65%)
 Frame = -1

Query: 330 NLKWQNFGEGRAKRGKMHWVAWEKMCEPKCAGGMGFRRMETFNLALLTKQAWRLVTEVGN 151
           N  W    E R    K+HW +W+++C+ K  GGMGFR ++ FN ALL KQ WRLV    +
Sbjct: 73  NFWWXQKEETR----KIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQS 128

Query: 150 ELTSTLKAKYYPETSFWDASLRSNPSYAWRSILQSREILRKGCRWKVGDG 1
            +    KA+Y+P+TSF DA + SNPS+ WRSI+ SR +L  G RW+VG+G
Sbjct: 129 LVARVFKARYFPQTSFLDALVGSNPSFTWRSIVGSRSLLNAGLRWRVGNG 178



 Score = 44.3 bits (103), Expect(2) = 4e-31
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -3

Query: 418 GKEV--KVVLQSILTYRMQCFKFPSSVCHGLESQMAKFW 308
           G+EV  K V Q+I TY M CF+ P  VCH +ES +  FW
Sbjct: 37  GREVLIKSVAQAIPTYIMSCFRLPDGVCHEIESMVCNFW 75


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score =  112 bits (281), Expect(2) = 4e-30
 Identities = 48/95 (50%), Positives = 67/95 (70%)
 Frame = -1

Query: 285 KMHWVAWEKMCEPKCAGGMGFRRMETFNLALLTKQAWRLVTEVGNELTSTLKAKYYPETS 106
           K+HW +W+++C+ K  GGMGFR ++ FN ALL KQ WRL     + +    KA+Y+P+TS
Sbjct: 84  KIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYFPQTS 143

Query: 105 FWDASLRSNPSYAWRSILQSREILRKGCRWKVGDG 1
           F DA + SNPS+ WRSI+ SR +L  G RW+VG+G
Sbjct: 144 FLDALVGSNPSFTWRSIVGSRRLLNAGLRWRVGNG 178



 Score = 43.5 bits (101), Expect(2) = 4e-30
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -3

Query: 418 GKEV--KVVLQSILTYRMQCFKFPSSVCHGLESQMAKFW*GSSE 293
           G+EV  K V Q+I TY M CF+ P  VC  +ES +  FW G  E
Sbjct: 37  GREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQKE 80


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  107 bits (268), Expect(2) = 4e-28
 Identities = 49/95 (51%), Positives = 68/95 (71%)
 Frame = -1

Query: 285  KMHWVAWEKMCEPKCAGGMGFRRMETFNLALLTKQAWRLVTEVGNELTSTLKAKYYPETS 106
            K+HW +WE++C PK +GG+GFR +++FN ALL KQAWRL+      L+  LK++Y+  T 
Sbjct: 798  KIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATD 857

Query: 105  FWDASLRSNPSYAWRSILQSREILRKGCRWKVGDG 1
            F DA+L   PS+ WRSIL  RE+L KG + +VGDG
Sbjct: 858  FLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDG 892



 Score = 42.0 bits (97), Expect(2) = 4e-28
 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 424 KGGKEV--KVVLQSILTYRMQCFKFPSSVCHGLESQMAKFW 308
           +GGKEV  K V  ++  + M CFK P + C  LES MA FW
Sbjct: 749 QGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFW 789


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  107 bits (268), Expect(2) = 4e-28
 Identities = 49/95 (51%), Positives = 68/95 (71%)
 Frame = -1

Query: 285  KMHWVAWEKMCEPKCAGGMGFRRMETFNLALLTKQAWRLVTEVGNELTSTLKAKYYPETS 106
            K+HW +WE++C PK +GG+GFR +++FN ALL KQAWRL+      L+  LK++Y+  T 
Sbjct: 801  KIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATD 860

Query: 105  FWDASLRSNPSYAWRSILQSREILRKGCRWKVGDG 1
            F DA+L   PS+ WRSIL  RE+L KG + +VGDG
Sbjct: 861  FLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDG 895



 Score = 42.0 bits (97), Expect(2) = 4e-28
 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 424 KGGKEV--KVVLQSILTYRMQCFKFPSSVCHGLESQMAKFW 308
           +GGKEV  K V  ++  + M CFK P + C  LES MA FW
Sbjct: 752 QGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFW 792


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  103 bits (257), Expect(2) = 1e-27
 Identities = 46/95 (48%), Positives = 63/95 (66%)
 Frame = -1

Query: 285  KMHWVAWEKMCEPKCAGGMGFRRMETFNLALLTKQAWRLVTEVGNELTSTLKAKYYPETS 106
            ++HW  W+ +C  KC GGMGFR +  FN ALL +QAWRLV E  + L   +KAKYY    
Sbjct: 839  RIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAWRLVREPHSLLARVMKAKYYSNHD 898

Query: 105  FWDASLRSNPSYAWRSILQSREILRKGCRWKVGDG 1
            F DA L  + SY+WRSI  S+ +L++G  W++G+G
Sbjct: 899  FLDAPLGVSTSYSWRSIWSSKALLKEGMVWRIGNG 933



 Score = 44.7 bits (104), Expect(2) = 1e-27
 Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
 Frame = -3

Query: 424 KGGKEV--KVVLQSILTYRMQCFKFPSSVCHGLESQMAKFW*GSSET 290
           + GKE+  K V+Q+I TY M  +K P S+   + S MA+FW GSS+T
Sbjct: 790 RAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWWGSSDT 836


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