BLASTX nr result

ID: Lithospermum22_contig00046466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046466
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29768.3| unnamed protein product [Vitis vinifera]               75   5e-12
ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containi...    75   5e-12
ref|XP_002318193.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. l...    59   3e-07
ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = -3

Query: 283 FRLEPKHAGYSVLMSNLYADSSKWKEVVKLRETMKIGGLKKPAAMSLVEFPEEV 122
           F+LEP+H GY VLMSN+YA S+KWKEV  +R+ MK  GLKKPAA S++EF  EV
Sbjct: 500 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEV 553


>ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = -3

Query: 283 FRLEPKHAGYSVLMSNLYADSSKWKEVVKLRETMKIGGLKKPAAMSLVEFPEEV 122
           F+LEP+H GY VLMSN+YA S+KWKEV  +R+ MK  GLKKPAA S++EF  EV
Sbjct: 531 FQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEV 584


>ref|XP_002318193.1| predicted protein [Populus trichocarpa] gi|222858866|gb|EEE96413.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/53 (62%), Positives = 43/53 (81%)
 Frame = -3

Query: 280 RLEPKHAGYSVLMSNLYADSSKWKEVVKLRETMKIGGLKKPAAMSLVEFPEEV 122
           +LEP H GY VLMSN+YA S+KWKEV KLR+ MK  GLKKPAA S++E+ +++
Sbjct: 358 QLEPNHTGYYVLMSNIYAASNKWKEVWKLRQDMKNKGLKKPAAFSMIEYGKDI 410


>ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 659

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = -3

Query: 283 FRLEPKHAGYSVLMSNLYADSSKWKEVVKLRETMKIGGLKKPAAMSLVEFPEEV 122
           F L+P + GY +L+S++YADS +WK+V ++R TMK  GL KP   SL+E   EV
Sbjct: 483 FELDPSNCGYYMLLSHIYADSGRWKDVERVRMTMKNRGLVKPPGFSLLELNGEV 536


>ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = -3

Query: 283 FRLEPKHAGYSVLMSNLYADSSKWKEVVKLRETMKIGGLKKPAAMSLVEFPEEV 122
           F LEP++ G  VL+SN+YA   +W++V ++RE MK GGLKK   MS VE+  +V
Sbjct: 583 FELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQV 636


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