BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00046431
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi...    62   4e-08
ref|XP_002866485.1| pentatricopeptide repeat-containing protein ...    62   6e-08
ref|XP_002518060.1| pentatricopeptide repeat-containing protein,...    61   1e-07

>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Vitis vinifera]
          Length = 1101

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/81 (46%), Positives = 58/81 (71%), Gaps = 3/81 (3%)
 Frame = -1

Query: 236 SCCPLQDP---SSPKHENHHKLRCFTLIEQLISRGLISSAQKVIQRLIYKSSSVCEALSA 66
           +C P  DP   S+P  E+H+KL CFTL ++LI RG++S  Q+V++R+I +S SV +A+ A
Sbjct: 21  TCSPALDPPPSSAPTTEHHNKL-CFTLTDRLIRRGVLSLGQQVVRRMIKQSPSVSDAILA 79

Query: 65  VDFVIARGVRLDSCSFSFVIR 3
           V+F  ARG+ LDSC +  ++R
Sbjct: 80  VEFAAARGLELDSCGYGVLLR 100


>ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 227 PLQDP--SSPKHENHHKLRCFTLIEQLISRGLISSAQKVIQRLIYKSSSVCEALSAVDFV 54
           PL  P  SS    + HK  CF+L+EQLI RG    AQ+VIQR++ +SSS+ EA+S V+F 
Sbjct: 13  PLDPPTTSSFSSASEHKNLCFSLVEQLIRRGFFFQAQQVIQRIVTQSSSISEAISIVNFA 72

Query: 53  IARGVRLDSCSFSFVIR 3
              G+ LD  +   + R
Sbjct: 73  AEWGLELDLATHGLLCR 89


>ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g62370-like [Cucumis sativus]
          Length = 693

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -1

Query: 227 PLQDP--SSPKHENHHKLRCFTLIEQLISRGLISSAQKVIQRLIYKSSSVCEALSAVDFV 54
           PL  P  SS    + HK  CF+L+EQLI RG    AQ+VIQR++ +SSS+ EA+S V+F 
Sbjct: 13  PLDPPTTSSFSSASEHKNLCFSLVEQLIRRGFFFQAQQVIQRIVTQSSSISEAISIVNFA 72

Query: 53  IARGVRLDSCSFSFVIR 3
              G+ LD  +   + R
Sbjct: 73  AEWGLELDLATHGLLCR 89


>ref|XP_002866485.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312320|gb|EFH42744.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 983

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
 Frame = -1

Query: 257 FGSKRPFSCCPLQDPSSPKHE--------NHHKLRCFTLIEQLISRGLISSAQKVIQRLI 102
           F   R  S C L    SP             H+ RC +LI +L  RGL++SA++VI+R+I
Sbjct: 12  FLKSRKASTCALSSELSPSTSAAVVSAASGDHRSRCLSLIVKLGRRGLVNSAREVIRRVI 71

Query: 101 YKSSSVCEALSAVDFVIARGVRLDSCSFSFVIR 3
              SS+ EA S  DF +  G+ LDSC    +IR
Sbjct: 72  DGCSSISEAASVADFAVNNGIELDSCCCGALIR 104


>ref|XP_002518060.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542656|gb|EEF44193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 402

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
 Frame = -1

Query: 248 KRPFSCCPLQ-----DPSSPKHENHHKLRCFTLIEQLISRGLISSAQKVIQRLIYKSSSV 84
           KR  S C         P +    N HK  CF+L E L  RG ++SAQ++IQR++  SS+V
Sbjct: 16  KRKISTCSAAAYLDIPPPTATLPNGHKTLCFSLAENLFRRGRLASAQEIIQRIVTDSSTV 75

Query: 83  CEALSAVDFVIARGVRLDSCSFSFVIR 3
            +A+S VDF  +RG+ L    ++  +R
Sbjct: 76  PDAISTVDFAASRGINLSVGIYAAFVR 102